mRNA_Ecto-sp13_S_contig7920.19203.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: D7FT69_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT69_ECTSI) HSP 1 Score: 174 bits (442), Expect = 1.060e-48 Identity = 90/94 (95.74%), Postives = 91/94 (96.81%), Query Frame = 1
Query: 1 HQEKSLPALENGAPGGAGDDAAATAEPSAANGPTKFTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQLEEAFEA 282
HQ K + ALENGAPGGAGDDAAATAEPSAANGPTKFTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQLEEAFEA
Sbjct: 2275 HQVKDISALENGAPGGAGDDAAATAEPSAANGPTKFTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQLEEAFEA 2368
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: A0A835YLN5_9STRA (Dynein heavy chain and region D6 of dynein motor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN5_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.520e-14 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 1
Query: 106 FTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQLEE 270
F L+ E LV EL WLVEPCLAF+RRE++EM PTVDTNLV+SLINIMEC L +
Sbjct: 1272 FVLSRQERQLVEELCLWLVEPCLAFIRRELTEMSPTVDTNLVRSLINIMECLLSK 1326
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: D0MXQ9_PHYIT (Dynein heavy chain n=28 Tax=Phytophthora TaxID=4783 RepID=D0MXQ9_PHYIT) HSP 1 Score: 69.3 bits (168), Expect = 1.050e-11 Identity = 31/53 (58.49%), Postives = 44/53 (83.02%), Query Frame = 1
Query: 106 FTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQL 264
F + + + +L+ LF+WLVEPC+AF+R+E+ E+ PTVDTNLVQSLI+I+E QL
Sbjct: 2074 FEINSEQRILIYFLFSWLVEPCIAFVRKELVELSPTVDTNLVQSLIHILEAQL 2126
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: K3WBA0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBA0_GLOUD) HSP 1 Score: 67.4 bits (163), Expect = 4.980e-11 Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 28 ENGAPGGAGDDAAATAEPSAANGPTKFTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQL 264
ENGA G G AA P A N + L+ LFAWLVEPC+AF+R+E+ E+ PTVDTNLV SLI+I+E QL
Sbjct: 800 ENGATGNPGTLAAPPPGPIAIN--------REQRALLSFLFAWLVEPCIAFVRKELVELTPTVDTNLVMSLIHILEAQL 870
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: A0A662X5F7_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A662X5F7_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 6.850e-11 Identity = 32/61 (52.46%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 82 SAANGPTKFTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQL 264
+A +GP F + + + L+ LF+WLVEPC++F+R+E+ E+ PTVDTNL+QSLI+I+E QL
Sbjct: 2084 AALSGP--FEINSEQRTLLSFLFSWLVEPCISFVRKELVELSPTVDTNLIQSLIHILEAQL 2142
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: A0A3F2RZ69_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RZ69_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 9.320e-11 Identity = 31/53 (58.49%), Postives = 42/53 (79.25%), Query Frame = 1
Query: 106 FTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQL 264
F + + + L+ LF+WLVEPC+AF+R+E+ E+ PTVDTNLVQSLI+I E QL
Sbjct: 1367 FEINSEQRNLIYFLFSWLVEPCIAFVRKELVELSPTVDTNLVQSLIHIFEAQL 1419
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: A0A0P1B0L6_PLAHL (Dynein heavy chain axonemal n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0L6_PLAHL) HSP 1 Score: 66.6 bits (161), Expect = 9.340e-11 Identity = 30/55 (54.55%), Postives = 45/55 (81.82%), Query Frame = 1
Query: 106 FTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQLEE 270
F + ++ L+ LF+WLVEPC+AF+R+E++E+ PTVD+NLVQSLI+I+E QL +
Sbjct: 2020 FEINFDQRKLIFFLFSWLVEPCIAFVRKELTELSPTVDSNLVQSLIHILEAQLSK 2074
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: A0A8K1FD19_PYTOL (Uncharacterized protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A8K1FD19_PYTOL) HSP 1 Score: 66.6 bits (161), Expect = 9.350e-11 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 76 EPSAANGPTKFTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQL 264
E S GP + L + L LF+WLVEPC+AF+R+E+ E+ PTVDTNLVQSLI+I+E QL
Sbjct: 2118 EASPCIGPFEINLEQRQLLTF--LFSWLVEPCIAFVRKELVELSPTVDTNLVQSLIHILEAQL 2178
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: H3G9Y8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9Y8_PHYRM) HSP 1 Score: 66.2 bits (160), Expect = 1.270e-10 Identity = 31/53 (58.49%), Postives = 42/53 (79.25%), Query Frame = 1
Query: 106 FTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQL 264
F + ++ L+ LF+WLVEPC+AF+R+E+ E+ PTVDTNLVQSLI+I E QL
Sbjct: 1141 FEINNDQRSLIYFLFSWLVEPCIAFVRKELVELSPTVDTNLVQSLIHIFEAQL 1193
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Match: A0A7S2QVE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVE7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.280e-10 Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 106 FTLTANECLLVRELFAWLVEPCLAFLRREVSEMVPTVDTNLVQSLINIMECQLEEAF 276
F T E LVRELF W+VEP ++ +R+E E+VPTVDTNLV SL+ MEC L F
Sbjct: 1910 FVFTPREAQLVRELFHWVVEPLVSLVRKETIEVVPTVDTNLVNSLMISMECMLSTCF 1966 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7920.19203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7920.19203.1 >prot_Ecto-sp13_S_contig7920.19203.1 ID=prot_Ecto-sp13_S_contig7920.19203.1|Name=mRNA_Ecto-sp13_S_contig7920.19203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp HQEKSLPALENGAPGGAGDDAAATAEPSAANGPTKFTLTANECLLVRELFback to top mRNA from alignment at Ecto-sp13_S_contig7920:1561..2103+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7920.19203.1 ID=mRNA_Ecto-sp13_S_contig7920.19203.1|Name=mRNA_Ecto-sp13_S_contig7920.19203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7920:1561..2103+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7920:1561..2103+ >mRNA_Ecto-sp13_S_contig7920.19203.1 ID=mRNA_Ecto-sp13_S_contig7920.19203.1|Name=mRNA_Ecto-sp13_S_contig7920.19203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=282bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7920:1561..2103+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |