mRNA_Ecto-sp13_S_contig12291.1919.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: D8LMM8_ECTSI (Transaldolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMM8_ECTSI) HSP 1 Score: 396 bits (1018), Expect = 7.640e-135 Identity = 205/227 (90.31%), Postives = 216/227 (95.15%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPHLITEMARLPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSKLDEQSFLAALGRDTCGTEVLRSSVEGFASDTTALEAAVAIAEQ 681
+AG PR+RVLIKTPATWAGIRAT RLEREGIRCLVTLVCSRVQGQAAAEAGAS+IATYVGRVSDWHKKAAA+ETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFV+HGLPTEVMGASFR+ADQVEALAGCDHLTIAP LITEMARLPPRV AGVPTSGNM P+QETRRPSEPM+ +PSK DE+SFLAALGRDTCGTEVLRSSVEGFA DT ALEAAVA AE+
Sbjct: 196 EAGIPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAASETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVSHGLPTEVMGASFRSADQVEALAGCDHLTIAPRLITEMARLPPRVGTAGVPTSGNMPPEQETRRPSEPMNGNPSKPDEESFLAALGRDTCGTEVLRSSVEGFARDTAALEAAVAKAER 422
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: A0A7Z0ME10_9BURK (Transaldolase n=1 Tax=Alcaligenaceae bacterium TaxID=2021368 RepID=A0A7Z0ME10_9BURK) HSP 1 Score: 154 bits (388), Expect = 2.640e-41 Identity = 90/220 (40.91%), Postives = 126/220 (57.27%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPHLITEMARLPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSKLDEQSFLAALGRDTCGTEVLRSSVEGFASDTTALEA 660
QAG PR+RVLIK +TW GI+A +L+ EGIRC +TL+ S Q A A+A A +I+ +VGR+ DW+KKAA A+ + A+ + DPGV + DY+ AHG+PTE+MGASFRN Q+ ALAGCD LTI+P L+ E+++ + P + P+ R P E + DE +F L D TE L + F++D L+A
Sbjct: 115 QAGVPRERVLIKLASTWEGIQAARQLQSEGIRCNMTLLFSLPQAVACAQARAQLISPFVGRIYDWYKKAAGADW-----------DEAANAGANDPGVRSVRRIYDYYKAHGIPTEIMGASFRNIGQIRALAGCDLLTISPELLNELSQ-------STEPLERQLDPEAAKRNPPEREAS-----DEVAFRTGLNDDAMATEKLAEGIRAFSADAIKLDA 311
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: A0A5P9JR96_9HYPH (Transaldolase n=3 Tax=Microvirga TaxID=186650 RepID=A0A5P9JR96_9HYPH) HSP 1 Score: 149 bits (377), Expect = 1.290e-39 Identity = 93/227 (40.97%), Postives = 122/227 (53.74%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPHLITEMAR----LPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSKLDEQSFLAALGRDTCGTEVLRSSVEGFASDTTALEAAVA 669
+ G R+R+LIK +TW GIRA L++EGI C +TL+ S+VQ QA AEAG +I+ +VGR+ DWH K TG DPGV + + + A G+PT VMGASFRN ++EALAGCD LTI+P L+ E+A+ LP R+ P GV R P+ P +LDE+SF AL D TE L + F D +L VA
Sbjct: 121 ERGIGRERILIKIASTWEGIRAAEILQKEGIDCNLTLLFSQVQAQACAEAGVFLISPFVGRILDWHVKNGGGPYTG----------------ETDPGVLSVRRIYESYKAQGIPTVVMGASFRNIGEIEALAGCDRLTISPALLDELAKAEGELPRRLSPDGV-----------ARIPA------PQRLDEKSFRFALNEDAMATEKLAEGIRSFVKDLRSLRTLVA 314
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: A0A7S2V3H4_9STRA (Transaldolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3H4_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.130e-38 Identity = 95/220 (43.18%), Postives = 120/220 (54.55%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALA-GCDHLTIAPHLITEMARLPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSKLDEQSFLAALGRDTCGTEVLRSSVEGFASDTTALE 657
Q G PR+RVLIK ATW G++A +LE EGI+CLVTLV QG AAAEAGASM+ATYVGRVSDWH A+E +S + ED GV +T + GL TEVM ASFR+ DQ LA C+HLTIAP ++ ++ P R P T + + KL + A+ RD C ++V SS +GF DT AL+
Sbjct: 99 QQGIPRERVLIKVAATWEGLQAVKQLESEGIKCLVTLVVCEAQGIAAAEAGASMLATYVGRVSDWHN---ASEDQ-------------SSESREDAGVLMTEAIARALKERGLKTEVMAASFRSTDQAARLAQSCEHLTIAPEILKDLTSEPAR----------KTLPSSFTETDTSVAITN-KKLTQDDLETAIFRDLCASQVYSSSFQGFLDDTRALQ 291
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: A0A2A2I6S9_9GAMM (Transaldolase n=2 Tax=Tamilnaduibacter salinus TaxID=1484056 RepID=A0A2A2I6S9_9GAMM) HSP 1 Score: 147 bits (370), Expect = 1.320e-38 Identity = 92/219 (42.01%), Postives = 120/219 (54.79%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPHLITEMARLPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSKLDEQSFLAALGRDTCGTEVLRSSVEGFASDTTALE 657
+AG RVLIK +TW GIRA LE EGIRC +TL+ S Q A A+AGA +++ +VGR+ DWH K ++ A EDPGV T + +YF HG T VMGASFRN ++EALAGCD LTI+P L+ E++ PA +P +AP Q + SDHP +DE+SF ++ D TE L + FA D LE
Sbjct: 121 EAGADPTRVLIKIASTWEGIRAAQILENEGIRCNLTLLFSFTQAAACADAGAHLVSPFVGRILDWHLK---------------NSDRDAFEPFEDPGVRSVTRIYEYFKTHGFETIVMGASFRNTGEIEALAGCDRLTISPALLGELS-----ADPANLPRV--LAPDQASS------SDHPVSMDEKSFRWSMNDDAMATEKLAEGIRRFADDQLELE 311
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: UPI001866E04F (transaldolase n=1 Tax=Microbulbifer hainanensis TaxID=2735675 RepID=UPI001866E04F) HSP 1 Score: 147 bits (370), Expect = 1.700e-38 Identity = 94/219 (42.92%), Postives = 117/219 (53.42%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPHLITEMARLPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSKLDEQSFLAALGRDTCGTEVLRSSVEGFASDTTALE 657
QAG PR+RVLIK +TW GI A LEREGI C +TL+ S Q A AEAGA++I+ +VGR+ DWHK A ++ +P EDPGV + Y+ + G PT VMGASFRN ++EALAGCD LTI+P L+ E+A S +A ET+ SEP P L E F L RD TE L + F D LE
Sbjct: 122 QAGVPRERVLIKIASTWEGIAAAAVLEREGIHCNLTLLFSFCQAVACAEAGATLISPFVGRILDWHK--ANSDRDDFSP-------------EEDPGVLSVRAIYHYYKSRGYPTIVMGASFRNTGEIEALAGCDRLTISPQLLQELAE-----------DSAPLAAGLETQIASEPRPAQP--LSEAEFRYQLNRDAMATEKLAEGIRNFVQDQERLE 312
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: A0A0Q6EP03_9HYPH (Transaldolase n=1 Tax=Aurantimonas sp. Leaf443 TaxID=1736378 RepID=A0A0Q6EP03_9HYPH) HSP 1 Score: 146 bits (369), Expect = 1.900e-38 Identity = 87/222 (39.19%), Postives = 116/222 (52.25%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPHLITEMARLPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSKLDEQSFLAALGRDTCGTEVLRSSVEGFASDTTALEAAV 666
+ G PR+RVLIK ATW GIRA L++EGI C +TL+ +R Q A A+AG +I+ +VGR+ DW+ K+ T A EDPGV + DYF ++G+ T VMGASFRN ++EALAGCD LTI+P L++E+A + P + P P LDE SF A+ D TE L + FA D +L V
Sbjct: 121 ERGVPRERVLIKLAATWEGIRAAEILQKEGIDCNLTLIFNRTQAIACADAGVFLISPFVGRIMDWYAKSTGKTYT----------------AEEDPGVLSVRSIYDYFKSNGIRTVVMGASFRNVGEIEALAGCDRLTISPALLSELA--------------ASEGPLERRLSPERAEKIEPIALDEASFRWAMNEDAMATEKLAEGIRSFAKDLRSLRGLV 312
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: A0A1H2F791_9PSED (Transaldolase n=1 Tax=Pseudomonas pohangensis TaxID=364197 RepID=A0A1H2F791_9PSED) HSP 1 Score: 146 bits (368), Expect = 1.920e-38 Identity = 92/222 (41.44%), Postives = 120/222 (54.05%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPHLITEMARLPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSK--LDEQSFLAALGRDTCGTEVLRSSVEGFASDTTALEA 660
Q+G R+RVLIK ATW GIRA +LER+GI+C +TL+ S Q A AEAG +I+ +VGR+ DW+KK+ + TG +EDPGV + + Y+ AHG T VMGASFRN Q+EALAGCD LTI+P L+ ++A + + E +R DH + LDE F AL D TE L + FA D LEA
Sbjct: 114 QSGIGRERVLIKIAATWEGIRAAEQLERDGIQCNLTLLFSFAQAVACAEAGTFLISPFVGRIYDWYKKSENRDFTG----------------TEDPGVQSVSRIYRYYKAHGYQTVVMGASFRNIGQIEALAGCDRLTISPDLLNQLA-----------------SDQGELKRQLHAGDDHEPRQTLDEARFRWALNEDAMATEKLAEGIRLFARDQEKLEA 302
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: A0A7X6WZP7_9BURK (Transaldolase n=1 Tax=Alcaligenaceae bacterium TaxID=2021368 RepID=A0A7X6WZP7_9BURK) HSP 1 Score: 146 bits (368), Expect = 2.550e-38 Identity = 90/220 (40.91%), Postives = 122/220 (55.45%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPHLITEMARLPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSKLDEQSFLAALGRDTCGTEVLRSSVEGFASDTTALEA 660
Q+G PR RVLIK +TW GI+A +L+ EGIRC +TL+ S Q A A+A +I+ +VGR+ DWHKKAA ++ TANA A DPGV + +Y+ AH +PTE+MGASFRN Q+ ALAGCD LTI+P L+ E+++ + P + P+ R P + DE +F L D TE L + F SD L+A
Sbjct: 115 QSGIPRDRVLIKLASTWEGIQAARKLQSEGIRCNMTLLFSLPQAVACAQARVQLISPFVGRIYDWHKKAAGSDWDE-------TANAGA----HDPGVLSVKRIYNYYKAHDIPTEIMGASFRNIGQIRALAGCDLLTISPELLNELSQ-------STEPLEVQLDPEAARRNPPAREAS-----DEVAFRMGLNDDAMATEKLAEGIRNFCSDAVKLDA 311
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Match: A0A0M4L3N2_9BURK (Transaldolase n=11 Tax=Burkholderiaceae TaxID=119060 RepID=A0A0M4L3N2_9BURK) HSP 1 Score: 146 bits (369), Expect = 2.620e-38 Identity = 90/225 (40.00%), Postives = 123/225 (54.67%), Query Frame = 1
Query: 1 QAGFPRKRVLIKTPATWAGIRATGRLEREGIRCLVTLVCSRVQGQAAAEAGASMIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPHLITEMARLPPRVYPAGVPTSGNMAPKQETRRPSEPMSDHPSKL--DEQSFLAALGRDTCGTEVLRSSVEGFASDTTALEAAVA 669
+AG PR+RVLIK +TW GIRA L+REGIRC +TL+ S VQ A AEAGA +I+ +VGR+ DW++K A + N A+ DPGV + DY+ G TEVMGASFRN DQ+ +LAGCD LTI+P L+ ++A + AP + + + H +++ DE +F L D TE L + FA+D LE +A
Sbjct: 133 RAGVPRERVLIKIASTWEGIRAAEVLQREGIRCNMTLLFSLVQAVACAEAGAQLISPFVGRILDWYRKQAGDKW-----------NPDANSGDADPGVHSVRQIYDYYKRFGYKTEVMGASFRNTDQILSLAGCDLLTISPELLEQLA--------------ASTAPVERKLSVDDAQAGHIARVHCDEPAFRWQLNEDAMATEKLAEGIRAFAADAVKLERLIA 332 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12291.1919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12291.1919.1 >prot_Ecto-sp13_S_contig12291.1919.1 ID=prot_Ecto-sp13_S_contig12291.1919.1|Name=mRNA_Ecto-sp13_S_contig12291.1919.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=175bp MIATYVGRVSDWHKKAAAAETTGGAPAPPGTANAPASCASEDPGVTLTTDback to top mRNA from alignment at Ecto-sp13_S_contig12291:3031..4808- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12291.1919.1 ID=mRNA_Ecto-sp13_S_contig12291.1919.1|Name=mRNA_Ecto-sp13_S_contig12291.1919.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1778bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12291:3031..4808- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12291:3031..4808- >mRNA_Ecto-sp13_S_contig12291.1919.1 ID=mRNA_Ecto-sp13_S_contig12291.1919.1|Name=mRNA_Ecto-sp13_S_contig12291.1919.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=525bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12291:3031..4808- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |