prot_Ecto-sp13_S_contig7905.19184.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig7905.19184.1
Unique Name	prot_Ecto-sp13_S_contig7905.19184.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	417

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 5.980e-115
Identity = 183/312 (58.65%), Postives = 220/312 (70.51%), Query Frame = 0

Query:  110 QDATTAKKEEPERSLTIKVRDQTGEETYFKVRSTTVMSKIANIYCSMKGVSMTAMMFALDGHLVGHYETPASLELEDGDQIDARLIQSGGKPVILLYPSVPLDTAVTLELSPLWRFSALYPKPPSSKLQQAST-----SEAALAGGQLCKWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGLDVTRSSCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNVIYFVDVNRYEKAARLTIAPAPDVMIRIFMAFRGTDAYDAELDTAKMEDLRAPARKGFVAVEWGGMNLNGSSHD 416
            +D T +  +E E  ++  ++  TG++   +   +  +  +       +G+          G       T     + +G    A L+ S  KPVILLYP  P+D  V +ELSPLW FS+LYPK     L+Q +      S+A +AGGQ CKWNVHASP GSL+DLSTGREYPYLFWEADSSDGRV+RSFGLD +RS CVAG+AAGVFLD ALERLGLN+RERCDMVT WLPQLESS FNVIYFV+V RYE+AARLTI P PDV IR+FMAFRG  AYDAELDTAK+E+LR+PAR+GFVAVEWGGMNLNG SHD
Sbjct:  144 EDTTDSVADEDENEISFSIKTLTGKQHTIRAFPSETVLDVKKKVQDTQGIPCEQQRIIYAGQQTSDDRTLRDCNIRNGSV--AHLVLSLRKPVILLYPPAPVDITVAVELSPLWSFSSLYPKLQPRNLKQLAADYEAGSQANVAGGQQCKWNVHASPGGSLKDLSTGREYPYLFWEADSSDGRVTRSFGLDGSRSFCVAGEAAGVFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGAHAYDAELDTAKIEELRSPAREGFVAVEWGGMNLNGVSHD 453

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: D7FJP3_ECTSI (Ubiquitin fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP3_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 2.690e-51
Identity = 85/95 (89.47%), Postives = 86/95 (90.53%), Query Frame = 0

Query:  322 MRERCDMVTYWLPQLESSPFNVIYFVDVNRYEKAARLTIAPAPDVMIRIFMAFRGTDAYDAELDTAKMEDLRAPARKGFVAVEWGGMNLNGSSHD 416
            MRERCDMVTYWLPQLESS FNVIYFV+V RYEKAARLTI PAPDV IRIFMAFRG DAYD ELDTAKMEDLRAP RKGFVAVEWGGMNLN  SHD
Sbjct:    1 MRERCDMVTYWLPQLESSAFNVIYFVNVERYEKAARLTIEPAPDVTIRIFMAFRGIDAYDKELDTAKMEDLRAPGRKGFVAVEWGGMNLNRVSHD 95

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: D7FN69_ECTSI (Ubiquitin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN69_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 8.500e-41
Identity = 70/100 (70.00%), Postives = 83/100 (83.00%), Query Frame = 0

Query:  238 QQASTSEAALAGGQLCKWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGLDVTRSSCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLE 337
            +Q S  EA +A GQ C+W VHA+PDGSL D+ST REYPYLFWEADS+DG V  +FGL+ T S CVAG+ AG+FLD ALERLGLN+RERCD++TYWLPQLE
Sbjct:   59 RQTSGYEAIVASGQHCEWIVHANPDGSLTDISTSREYPYLFWEADSTDGLVCGNFGLEKTPSFCVAGNDAGLFLDVALERLGLNVRERCDVITYWLPQLE 158

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: A0A1Y4WJV0_9FIRM (Uncharacterized protein n=1 Tax=Flavonifractor sp. An10 TaxID=1965537 RepID=A0A1Y4WJV0_9FIRM)

HSP 1 Score: 147 bits (370), Expect = 1.930e-38
Identity = 88/213 (41.31%), Postives = 117/213 (54.93%), Query Frame = 0

Query:  198 GGKPVILLYPSVPLDTAVTLELSPLWRFSALYPKPPSSKLQQASTSEAALAGGQLCKWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGLDVTRSSCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNVIYFVDVNRYEKAARLTIAPAPDVMIRIFMAFRGTDAYDAELDTAKMEDLRAPARKGFVAVEWGGMNL 410
            G KPVI LYP    +  VTLEL     F++ YP                   G    W V A+PDG+L D ++GR Y  LFWE     G + R F  D++   CVAG+    FL+ AL RLGL  RE  + + YWLP++E +P+N+I F   + Y  AA LTI P+PD +IR+FM ++G +    E+     ++L APAR GF AVEWGG  L
Sbjct:   24 GAKPVIYLYPEEETEVTVTLELD--GTFTSTYPD---------------YGEG----WTVTAAPDGTLTDPNSGRTYYCLFWE-----GIIDRQF--DLSAGFCVAGEDTAAFLEDALARLGLTEREANEFIIYWLPRMEGNPYNLISF-QTDAYTDAAELTIDPSPDTLIRVFMTWKGLEQ-PVEIPA---QELTAPARTGFTAVEWGGAEL 203

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: A0A7K3KJH3_9ACTN (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A7K3KJH3_9ACTN)

HSP 1 Score: 144 bits (362), Expect = 3.590e-37
Identity = 86/220 (39.09%), Postives = 120/220 (54.55%), Query Frame = 0

Query:  191 DARLIQSGGKPVILLYPSVPLDTAVTLELSPLWRFSALYPKPPSSKLQQASTSEAALAGGQLCKWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGLDVTRSSCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNVIYFVDVNRYEKAARLTIAPAPDVMIRIFMAFRGTDAYDAELDTAKMEDLRAPARKGFVAVEWGGMNL 410
            D R   S  KPVI LYP       VTLE+      S +YP          ++++    GG    W V A PDG+L DLS+GRE  YLFWE D+        F  D ++  CV+GD    FL+ AL +LGL  RE  D +TYWLP+++ +P+N++ F   + Y + A L I P PD +IR+ MA+R  +    +++    ++L APAR GF  VEWGG  +
Sbjct:   18 DVRKDPSNEKPVIYLYPEQASVIDVTLEVEE--SLSCVYPA--------FASAQPTDTGGT---WRVFAQPDGTLTDLSSGRELGYLFWEGDAG-------FSPDFSQGFCVSGDDMRAFLEDALSKLGLTDREAADFITYWLPRMQENPYNLVSFQG-DAYARVACLGIDPEPDTVIRVQMAWRPLEV-PVQIEP---QELTAPARNGFTVVEWGGTQV 212

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: A0A8H8JTL5_9AGAM (Polyubiquitin-C n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JTL5_9AGAM)

HSP 1 Score: 149 bits (376), Expect = 4.860e-37
Identity = 115/333 (34.53%), Postives = 154/333 (46.25%), Query Frame = 0

Query:  126 IKVRDQTGEETYFKVRSTTVMSKIANIYCSMKGVSMTAMMFALDG---HLVGHYETPASLELEDGDQIDARLIQSGGKPVILLYPSVP-LDTAVTLELSPLWRFSALYPKPPSSKLQQASTSEAALAGGQLCKWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFG--------------LDVTRSSCVAGDAAGV-------FLDGALERLGLNMRERCDMVTYWLPQLESSPFNVIYFVDVNRYEKAARLTIAPAPDVMIRIFMAFRG-----------------------TDAYDAELDTAKMEDLRAPARKGFVAVEWGGMNL 410
            + +R  TGEET  K+    ++S++ +I  ++ G+   A  FAL G   H +   +T     + DGD+I A + Q GGKPVI L+P  P LD  + L L   W FSALYP  P   L   ST+      GQ   W V A PDG+L D  T RE  YLFWEA +         G               D  R    + DA  +       ++D AL  LGL+   R   +TYWLP L+   F  + F+  ++YE AA + I PAPDV+ R+FM F+G                       TD    +LD AK E L       F  +EWGGM +
Sbjct:  108 VTIRRATGEETILKISLDILVSELLSIVGTI-GI-YKAGHFALIGPDCHRLSANKTLRQQGVNDGDEIYAVMEQIGGKPVIYLFPPTPTLDIRLELGLVESWSFSALYPAAPI--LTPVSTTH-----GQSVSWTVDAKPDGALFDRHTQREISYLFWEAHTQPSAPISPAGSRACTPTIPGNAKTFDPARYQISSSDAVLLPFDKITSYIDDALLSLGLHTEARTSFITYWLPSLQRHSFIALCFLPQSQYEAAAPMKIEPAPDVVSRVFMVFKGVEKSQLGAWSEAHTRASMNPSMWTDIVGIKLDMAKDEKL-------FRVLEWGGMEI 424

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: A0A7X5D8X7_9CLOT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7X5D8X7_9CLOT)

HSP 1 Score: 139 bits (350), Expect = 1.110e-35
Identity = 84/212 (39.62%), Postives = 109/212 (51.42%), Query Frame = 0

Query:  200 KPVILLYPSVPLDTAVTLELSPLWRFSALYPKPPSSKLQQASTSEAALAGGQLCKWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGLDVTRSSCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNVIYFVDVNRYEKAARLTIAPAPDVMIRIFMAFRGTDAYDAELDTAKMEDLRAPARKGFVAVEWGGMNLN 411
            KPVI LYP  P    V LEL         YP         A   E + + G    W V A PDG+L DL  GREY YLFWE           +  D  R  C+AG     FL+ AL +LGL  +E  D +TYWLPQ++ +P+N+I F     Y++ ARLT+ P PD +IR+FMA+   D    E    + + L A  R+GF  VEWGG  ++
Sbjct:    5 KPVIYLYPKEPCVVEVALELE--GTVGMAYP---------AFNEERSASEGS---WKVQADPDGTLSDLRVGREYGYLFWEGVGD-------WEPDFDRGFCIAGADTAEFLEDALRQLGLTDKEADDFITYWLPQMQGNPYNLIAFQG-GAYDRTARLTVDPQPDTIIRVFMAWMRLD----EPVVVEPQVLSAAPREGFAVVEWGGGEVS 190

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: A0A096B0K5_FLAPL (Uncharacterized protein n=19 Tax=Eubacteriales TaxID=186802 RepID=A0A096B0K5_FLAPL)

HSP 1 Score: 139 bits (350), Expect = 1.850e-35
Identity = 83/212 (39.15%), Postives = 116/212 (54.72%), Query Frame = 0

Query:  200 KPVILLYPSVPLDTAVTLELSPLWRFSALYPKPPSSKLQQASTSEAALAGGQLCKWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGLDVTRSSCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNVIYFVDVNRYEKAARLTIAPAPDVMIRIFMAFRGTDAYDAELDTAKMEDLRAPARKGFVAVEWGGMNLN 411
            KPV+ LYP   ++  VTL+       ++ YP               A   G    W V A PDG+L + +TGREY  LFWE     G     +  D +   CVAG+    FL+ AL+RLGL  RE  + + YWLP+LE +P+N++ F   + Y  +A LTI PAPD +IR+F+A++G DA   E++    + L AP R GF AVEWGG  ++
Sbjct:   32 KPVLYLYPEEEMEVTVTLDFD--GTLTSTYP---------------AYGDG----WTVTARPDGTLTNPATGREYYCLFWE-----GITEAEY--DFSAGFCVAGEDTAAFLEDALDRLGLTEREADEFIIYWLPKLEGNPYNLLSF-QTDAYTDSAALTIDPAPDTLIRVFLAWKGLDA-PVEVEP---QTLTAPERTGFTAVEWGGAEVD 210

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: A0A096CD36_FLAPL (Uncharacterized protein n=14 Tax=Eubacteriales TaxID=186802 RepID=A0A096CD36_FLAPL)

HSP 1 Score: 139 bits (349), Expect = 2.660e-35
Identity = 84/211 (39.81%), Postives = 113/211 (53.55%), Query Frame = 0

Query:  200 KPVILLYPSVPLDTAVTLELSPLWRFSALYPKPPSSKLQQASTSEAALAGGQLCKWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGLDVTRSSCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNVIYFVDVNRYEKAARLTIAPAPDVMIRIFMAFRGTDAYDAELDTAKMEDLRAPARKGFVAVEWGGMNL 410
            KPV+ LYP    +  VTL+       ++ YP                   G    W V A PDG+L D +TGREY  LFWE     G     +  D +   CVAG+    FL+ AL+RLGL  RE  + + YWLP+LE +P+N++ F     Y  +A LTI PAPD +IR+F+A++G DA   E++    + L APAR GF AVEWGG  +
Sbjct:   32 KPVLYLYPEEETEVTVTLDFD--GTLTSTYPD---------------YGDG----WTVTARPDGTLTDPATGREYYCLFWE-----GITEAEY--DFSTGFCVAGEDTAAFLEDALDRLGLTGREADEFIIYWLPKLEGNPYNLLSF-QTEAYTSSAVLTIDPAPDTLIRVFLAWKGLDA-PVEIEP---QTLTAPARTGFTAVEWGGAEV 209

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BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Match: A8NLI4_COPC7 (Ubiquitin-like domain-containing protein n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=A8NLI4_COPC7)

HSP 1 Score: 144 bits (363), Expect = 3.770e-35
Identity = 101/324 (31.17%), Postives = 145/324 (44.75%), Query Frame = 0

Query:  130 DQTGEETYFKVRSTTVMSKIANIYCSMKGVSMTAMMFALDGHLVGHYE-TPASLELEDGDQIDARLIQSGGKPVILLYPSVPLDTAVTLELSPLWRFSALYPKPPSSKLQQASTSEAALAGGQLCKWNVHASPDGSLEDLSTGREYPYLFWEA-------------------DSSDGRVSRSF-----GLDVTRSSCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNVIYFVDVNRYEKAARLTIAPAPDVMIRIFMAFRGTDAYDAELDTAK-----------------MEDLRAPARKGFVAVEWGGMNLN 411
            + TG+    KV+  + +  + +    + G++  A      G  V     T A   ++ GD I    +  GGKPVI L+  V  + +V L L P W FSA+YP  P           A+   GQ  +W V  S DGSL++ +TG E  YLFWEA                   D  DG +   F      L    S  V       +LDGAL+ LGL+   R   +TYWLP +    +  + F+  + YE+AA L I PAPDV++RIFM F+G D  + E D  +                 ++  +A   + F  VEWGGM ++
Sbjct:  115 EPTGQRVTVKVKPDSKIGILHDAIEKVLGIARDAQRLLYGGRRVDITSGTFADYGIKSGDTIIVYNVLRGGKPVIYLFSPVEREVSVKLSLVPQWEFSAIYPVVP--------VKTASAGSGQEIEWTVTTSADGSLKERTTGLEVAYLFWEAETTRVAPLSPPPTPTIAATDPGDGPLQEVFVPNDAHLCSENSVVVETSKVTPYLDGALKALGLHTEARTSFITYWLPAILKHEYVALRFLPQSAYERAAPLDITPAPDVVLRIFMLFKGVDQGELEEDWKQAAYRATEPVGRWVQVVGVDVPKATDPQSFRVVEWGGMEIH 430

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7905.19184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G4B4_ECTSI	5.980e-115	58.65	Ubiquitin-like domain-containing protein n=1 Tax=E...	[more]
D7FJP3_ECTSI	2.690e-51	89.47	Ubiquitin fusion protein n=1 Tax=Ectocarpus silicu...	[more]
D7FN69_ECTSI	8.500e-41	70.00	Ubiquitin family protein n=1 Tax=Ectocarpus silicu...	[more]
A0A1Y4WJV0_9FIRM	1.930e-38	41.31	Uncharacterized protein n=1 Tax=Flavonifractor sp....	[more]
A0A7K3KJH3_9ACTN	3.590e-37	39.09	Uncharacterized protein n=3 Tax=Bacteria TaxID=2 R...	[more]
A0A8H8JTL5_9AGAM	4.860e-37	34.53	Polyubiquitin-C n=1 Tax=Ceratobasidium sp. AG-Ba T...	[more]
A0A7X5D8X7_9CLOT	1.110e-35	39.62	Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R...	[more]
A0A096B0K5_FLAPL	1.850e-35	39.15	Uncharacterized protein n=19 Tax=Eubacteriales Tax...	[more]
A0A096CD36_FLAPL	2.660e-35	39.81	Uncharacterized protein n=14 Tax=Eubacteriales Tax...	[more]
A8NLI4_COPC7	3.770e-35	31.17	Ubiquitin-like domain-containing protein n=1 Tax=C...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 92..199 e-value: 5.7E-22 score: 80.1
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 66..199
None	No IPR available	PANTHER	PTHR10562:SF14	SMALL UBIQUITIN-RELATED MODIFIER 1	coord: 66..199
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 125..193 e-value: 4.3E-13 score: 48.9
IPR000626	Ubiquitin domain	PROSITE	PS50053	UBIQUITIN_2	coord: 124..199 score: 9.765
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 112..199

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7905	contig	Ecto-sp13_S_contig7905:3203..6857 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7905.19184.1	mRNA_Ecto-sp13_S_contig7905.19184.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig7905 1957..6866 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig7905.19184.1 ID=prot_Ecto-sp13_S_contig7905.19184.1|Name=mRNA_Ecto-sp13_S_contig7905.19184.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=417bp
MTSLRILQKKGELLQEEKLIQLRRQEALPLGKRKRAPVAAASPPQAPDPP
ENSETSSSSGARGRAKRKLSEQPEDEQSRHSNGTERSSRLPAARETSYED
GRSAVDTQQQDATTAKKEEPERSLTIKVRDQTGEETYFKVRSTTVMSKIA
NIYCSMKGVSMTAMMFALDGHLVGHYETPASLELEDGDQIDARLIQSGGK
PVILLYPSVPLDTAVTLELSPLWRFSALYPKPPSSKLQQASTSEAALAGG
QLCKWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGLDVTRSS
CVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNVIYFVDVN
RYEKAARLTIAPAPDVMIRIFMAFRGTDAYDAELDTAKMEDLRAPARKGF
VAVEWGGMNLNGSSHD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022617	Rad60/SUMO-like_dom
IPR000626	Ubiquitin_dom
IPR029071	Ubiquitin-like_domsf