prot_Ecto-sp13_S_contig78710.19145.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig78710.19145.1
Unique Nameprot_Ecto-sp13_S_contig78710.19145.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig78710.19145.1 vs. uniprot
Match: A0A6H5L3A6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A6_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.040e-30
Identity = 54/61 (88.52%), Postives = 59/61 (96.72%), Query Frame = 0 
Query:    1 MVPPPPMTAFLAAGHRTFPPKTLFPMVVQGSTQRISSGWSGGTRRPLRISMQDFSSSAYWN 61
            MVPPPP+TAFLAAGHRTFPPKTL P+VVQGS++RISSGWSGGTR PLR+SMQDFSSSAYWN
Sbjct:    1 MVPPPPLTAFLAAGHRTFPPKTLLPVVVQGSSRRISSGWSGGTRLPLRVSMQDFSSSAYWN 61
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78710.19145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L3A6_9PHAE4.040e-3088.52Methyltransf_11 domain-containing protein n=1 Tax=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig78710contigEcto-sp13_S_contig78710:50..403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig78710.19145.1mRNA_Ecto-sp13_S_contig78710.19145.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig78710 20..435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig78710.19145.1 ID=prot_Ecto-sp13_S_contig78710.19145.1|Name=mRNA_Ecto-sp13_S_contig78710.19145.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
MVPPPPMTAFLAAGHRTFPPKTLFPMVVQGSTQRISSGWSGGTRRPLRIS
MQDFSSSAYWNIGTKCIPREKMIAVNRQCRSGMLRATCLLRRSNDYSLLG
VHLLLRILLLVGRRLQS*
back to top