mRNA_Ecto-sp13_S_contig7859.19129.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: D8LDZ0_ECTSI (VWFA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDZ0_ECTSI) HSP 1 Score: 227 bits (578), Expect = 8.710e-71 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE 336
LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE
Sbjct: 4 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE 115
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: A0A835Z3J6_9STRA (Putative 26S proteasome non-ATPase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J6_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.840e-59 Identity = 92/113 (81.42%), Postives = 104/113 (92.04%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDEV 339
LDNSEWMRNGDYIPTRMEAQHDAANL+CG+KT SNPESTVGVLTMAG GPELLVSPTDDMGKILSSLH V + G+T +A +QIAQLALKHRRNKHGGQR+++FV+SP+ D+V
Sbjct: 10 LDNSEWMRNGDYIPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGTGPELLVSPTDDMGKILSSLHDVKIGGRTCVSAAVQIAQLALKHRRNKHGGQRLVLFVASPVTDDV 122
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: A0A7S2V4F9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F9_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.870e-55 Identity = 89/112 (79.46%), Postives = 100/112 (89.29%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE 336
LDNSEWMRNGDYIPTRME+QHDAANLLCG+K SNPESTVGVL+MAG+ ELLVSPTDDMGKIL+SLH V + G+ N AA +QIAQLALKHRRNKHGGQR++IFV SP+ DE
Sbjct: 40 LDNSEWMRNGDYIPTRMESQHDAANLLCGAKIQSNPESTVGVLSMAGRRVELLVSPTDDMGKILASLHEVPIQGRLNLAAAVQIAQLALKHRRNKHGGQRVVIFVGSPVLDE 151
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: A0A2R5G3W1_9STRA (26S proteasome non-ATPase regulatory subunit 4-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3W1_9STRA) HSP 1 Score: 177 bits (450), Expect = 6.830e-52 Identity = 83/112 (74.11%), Postives = 98/112 (87.50%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE 336
LDNSEWMRNGDY+PTRMEAQHDA+NL+CGSKT NPESTVG++T AG G E+L SPTDDMG+ILS+ + V GK NFAAG+QIAQLALKHR+NK+GGQRI++FV SP+E E
Sbjct: 4 LDNSEWMRNGDYMPTRMEAQHDASNLVCGSKTQQNPESTVGIMTCAGAGVEVLCSPTDDMGRILSATANIRVGGKANFAAGLQIAQLALKHRKNKNGGQRIVMFVGSPVEAE 115
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: A0A7S2RPK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RPK5_9STRA) HSP 1 Score: 175 bits (443), Expect = 2.640e-51 Identity = 81/112 (72.32%), Postives = 96/112 (85.71%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE 336
LDNSEWMRNGD+ PTRMEAQHDAANL+CGSKT NPESTVG+LTMAG G ++L SPTDDMGKIL++ V V G TNF G+QIAQLALKHR+NK+GGQR+++F+ SPI+ E
Sbjct: 10 LDNSEWMRNGDFTPTRMEAQHDAANLVCGSKTQQNPESTVGILTMAGSGVQVLCSPTDDMGKILTASASVKVGGNTNFPGGLQIAQLALKHRKNKNGGQRVVVFIGSPIDAE 121
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: A0A0W8DJJ6_PHYNI (VWFA domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DJJ6_PHYNI) HSP 1 Score: 168 bits (426), Expect = 2.150e-50 Identity = 76/112 (67.86%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE 336
LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT +NPESTVGVL MAGK ++L SPTD+MG +LS++H + + G A IQ+AQLALKHRRNK GGQR+++F+ SPIE++
Sbjct: 10 LDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHRIKIGGSMKLANAIQVAQLALKHRRNKTGGQRVVVFIGSPIEED 121
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: A0A0P1B661_PLAHL (Multiubiquitin chain binding protein mbp1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B661_PLAHL) HSP 1 Score: 171 bits (432), Expect = 4.090e-50 Identity = 77/112 (68.75%), Postives = 96/112 (85.71%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE 336
LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT +NPESTVGVL MAGK ++L SPTD+MG +LS++HGV + G + IQ+AQLALKHRRNK GGQR+++F+ SPIE++
Sbjct: 10 LDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHGVKIGGSMKLSNAIQVAQLALKHRRNKTGGQRVVVFIGSPIEED 121
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: A0A3R7GT30_9STRA (VWFA domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GT30_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.180e-49 Identity = 79/112 (70.54%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE 336
LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT SNPESTVGVL MAGK ++L SPTD+MG +LS++H V V G A IQ+AQLALKHRRNK GGQR+++F+ SPIE++
Sbjct: 10 LDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQSNPESTVGVLAMAGKSTQVLASPTDNMGTLLSAIHRVKVGGTMKLANSIQVAQLALKHRRNKTGGQRVVVFIGSPIEED 121
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: A0A7S0V842_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0V842_9CRYP) HSP 1 Score: 165 bits (418), Expect = 2.390e-49 Identity = 77/112 (68.75%), Postives = 93/112 (83.04%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDE 336
+DNSEWMRNGDYIPTRME+Q DA NL+C KT NPESTVGV+T AG+GPE+LV+PT D+GKIL++LH V + G TNF IQ+AQLALKHR+NK+ QRII FV SP+ED+
Sbjct: 23 VDNSEWMRNGDYIPTRMESQADAVNLICNVKTQQNPESTVGVMTSAGRGPEVLVTPTQDLGKILTALHNVKITGSTNFVGTIQVAQLALKHRQNKNQRQRIIAFVGSPLEDD 134
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Match: A0A8K1FNX1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNX1_PYTOL) HSP 1 Score: 169 bits (427), Expect = 3.420e-49 Identity = 78/113 (69.03%), Postives = 98/113 (86.73%), Query Frame = 1
Query: 1 LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPI-EDE 336
LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT SNPESTVG+LTMAGKG ++L SPT++MG +L+++H VS+ G F+ +Q+AQLALKHRRNK G QR+++F+ SPI EDE
Sbjct: 10 LDNSEWMRNGDYIPSRLEAQHDAANLLCGAKTQSNPESTVGILTMAGKGVQVLASPTENMGTLLTAVHNVSIGGALKFSNALQVAQLALKHRRNKTGAQRVVVFIGSPIVEDE 122 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7859.19129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7859.19129.1 >prot_Ecto-sp13_S_contig7859.19129.1 ID=prot_Ecto-sp13_S_contig7859.19129.1|Name=mRNA_Ecto-sp13_S_contig7859.19129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp METTSPPGWRHSTTRLTFSAAARPTPTRRARSAFSPWPGRAPSSWSAPPTback to top mRNA from alignment at Ecto-sp13_S_contig7859:717..1564- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7859.19129.1 ID=mRNA_Ecto-sp13_S_contig7859.19129.1|Name=mRNA_Ecto-sp13_S_contig7859.19129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=848bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7859:717..1564- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7859:717..1564- >mRNA_Ecto-sp13_S_contig7859.19129.1 ID=mRNA_Ecto-sp13_S_contig7859.19129.1|Name=mRNA_Ecto-sp13_S_contig7859.19129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7859:717..1564- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |