prot_Ecto-sp13_S_contig7856.19125.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7856.19125.1
Unique Nameprot_Ecto-sp13_S_contig7856.19125.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length199
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7856.19125.1 vs. uniprot
Match: D7FXF6_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF6_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 4.170e-57
Identity = 121/213 (56.81%), Postives = 124/213 (58.22%), Query Frame = 0 
Query:   63 VDEEFQMALLRVVSRGGSPSPPPRHPGRTRWSFLKDVPRDLLPEGLTAA----------------------------------------------------------------------------GHAEPTPPATALSEAGDTQPEVT--AAAAAAAIYPKTPRVQADGDWDDDFCSGTDSDDPSAILSPTTEARMRCPVEVKTSRTGRSATA 197
            VDEEFQMALLRVVSRGGSPSPPPRHPGRTRWSFLKDVPRDLLP GL AA                                                                            G AEPTPPATALS  GDTQP+V   AAAAAAAIYPKTPRV+ADGD DDDF SGTDSDDPS +LSPTT ARMRCPVEVK SRTGRSATA
Sbjct:   34 VDEEFQMALLRVVSRGGSPSPPPRHPGRTRWSFLKDVPRDLLPGGLKAASERGHRGLPKAADASTRPSGXXXXXXXXXXXXXXXXXXXXXXXRDDASRRDRVSVESGRRAQQGGDHVKGIGADAAGRAEPTPPATALSGVGDTQPDVATAAAAAAAAIYPKTPRVKADGDRDDDFYSGTDSDDPSTVLSPTTAARMRCPVEVKASRTGRSATA 246
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BLAST of mRNA_Ecto-sp13_S_contig7856.19125.1 vs. uniprot
Match: A0A6H5L4J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J8_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 7.130e-37
Identity = 85/136 (62.50%), Postives = 90/136 (66.18%), Query Frame = 0 
Query:   69 MALLRVVSRGGSPSPPPRHPGRTRWSFLKDVPRDLLPEGLTAAGHAEPTPPATALSEAGDTQPEVTAAA------AAAAIYPKTPRVQADGDWDDDFCSGTDSDDPSAILSPTTEARMRCPVEVKTSRTGRSATAN 198
            MALLRVV +GG                      D+   G  AAG AEPTPPATA SE GDT+P+V AAA      AAAA YPK  RV+ADGD DDDF SGTDSDDPSAILSPTT ARMRCPVEVK SR GRSATAN
Sbjct:    1 MALLRVVQQGGD---------------------DVTGIGADAAGGAEPTPPATAFSEVGDTKPDVAAAAVVGVVPAAAATYPKPLRVKADGDGDDDFYSGTDSDDPSAILSPTTAARMRCPVEVKASRAGRSATAN 115
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7856.19125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXF6_ECTSI4.170e-5756.81SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L4J8_9PHAE7.130e-3762.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7856contigEcto-sp13_S_contig7856:2988..4707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7856.19125.1mRNA_Ecto-sp13_S_contig7856.19125.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7856 2987..4707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7856.19125.1 ID=prot_Ecto-sp13_S_contig7856.19125.1|Name=mRNA_Ecto-sp13_S_contig7856.19125.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp
AKEGGESAAVAAAEGESEFYVAFLPKGWRAGTAAGGRTAGGFRPMAPAAD
VDLQKHDVEVLHVDEEFQMALLRVVSRGGSPSPPPRHPGRTRWSFLKDVP
RDLLPEGLTAAGHAEPTPPATALSEAGDTQPEVTAAAAAAAIYPKTPRVQ
ADGDWDDDFCSGTDSDDPSAILSPTTEARMRCPVEVKTSRTGRSATANP
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