mRNA_Ecto-sp13_S_contig7853.19122.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: D8LR11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR11_ECTSI) HSP 1 Score: 244 bits (624), Expect = 1.260e-80 Identity = 121/167 (72.46%), Postives = 131/167 (78.44%), Query Frame = 1
Query: 1 PGCEALWCRGGYSRNSFDTTMHILRTRILKTSPFISLQHFIQGYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDSRAWTDP 501
P CEA WCRGGYSR+ + + + KT+ IS GY PR+TG+G G D AL F +TG L+EVPGIGP+FSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIG RGRIVQCIAEKVNMSYPGIYD AWTDP
Sbjct: 2 PSCEAPWCRGGYSRSRRNLCVWLAG----KTA--ISAGQQKTGYHPRQTGVGEGPDPALEAFKKAPITGLLSEVPGIGPKFSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIGF-RGRIVQCIAEKVNMSYPGIYDREAWTDP 161
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: D8LR07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR07_ECTSI) HSP 1 Score: 230 bits (587), Expect = 2.690e-75 Identity = 106/126 (84.13%), Postives = 112/126 (88.89%), Query Frame = 1
Query: 124 QGYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDSRAWTDP 501
QGYDP +TG+G G D AL F +TG L+EVPGIGP FSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIGG RGRIVQCIAEKVNMSYPGIY+S+AWT P
Sbjct: 13 QGYDPTQTGVGVGPDPALEAFNEAPITGLLSEVPGIGPAFSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIGGVRGRIVQCIAEKVNMSYPGIYNSKAWTGP 138
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: D8LR09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR09_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.450e-58 Identity = 86/126 (68.25%), Postives = 101/126 (80.16%), Query Frame = 1
Query: 124 QGYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDSRAWTDP 501
+G++PR+TG+ G D AL F +TG L+EVPGIGP GLLGEGEG+DC+KNTFQLIGKFLVLR S +EDG+LIDCVEHCDKFYWWL+SK + RGRIVQCIA K N+SYPGIYD+ W DP
Sbjct: 28 KGFNPRQTGVKEGPDPALEAFKKAPITGLLSEVPGIGPTAVGLLGEGEGDDCVKNTFQLIGKFLVLRGS-KEDGQLIDCVEHCDKFYWWLKSKAVDNYRGRIVQCIAVKTNLSYPGIYDTDKWEDP 152
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: D7FQ44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ44_ECTSI) HSP 1 Score: 134 bits (336), Expect = 2.200e-37 Identity = 65/124 (52.42%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 127 GYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDSRAWTD 498
GYDP+R+ + D L +F +TG LTEVPGI R + +L +GEG+D + NT+QLIGKFL LR ++ D + +D VEHCDKF++WLQ+KGI R IV IAEKVN PGIYD+ ++TD
Sbjct: 5 GYDPKRSKVS---DDKLAEFIRSAVTGDLTEVPGIAARGAEILADGEGDDKVTNTYQLIGKFLALRGPDKTDHE-VDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWIPGIYDADSYTD 124
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: A0A2D4C4D0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4D0_PYTIN) HSP 1 Score: 129 bits (323), Expect = 1.930e-35 Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 124 QGYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNE--EDGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDS 483
+GYDP+++ + + L DF LTG LTEVPGIG G L GE D ++NTFQLIGKFL+L+ S + EDG LIDC EHCD F++WL+SKGI R IV IAEKVN PGIYD+
Sbjct: 3 EGYDPQKSRVA---EDTLADFLRAPLTGDLTEVPGIGKAAVGKLAAGEEGDRVENTFQLIGKFLMLKQSTDKNEDG-LIDCAEHCDAFWYWLKSKGIQAYRSGIVMAIAEKVNTMLPGIYDA 120
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: D0P1T3_PHYIT (Uncharacterized protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0P1T3_PHYIT) HSP 1 Score: 126 bits (316), Expect = 2.290e-34 Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 1
Query: 127 GYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGE-GEDCIKNTFQLIGKFLVLRT-SNEEDGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDS 483
GYDP+++ + + L DF LTG LTEVPGIG LGE E GED + NTFQLIGKFL+L+ S++ D +IDC HCD F++WL+SKGI R IV IAEKVN PGIYD+
Sbjct: 4 GYDPQKSRVA---EDTLADFLRAPLTGDLTEVPGIGKAAVAKLGEAEDGEDAVTNTFQLIGKFLMLKANSDDNDDGVIDCAAHCDAFWFWLKSKGITAYRSGIVMAIAEKVNTMLPGIYDA 121
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: K0QZN8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZN8_THAOC) HSP 1 Score: 125 bits (315), Expect = 3.650e-34 Identity = 60/125 (48.00%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 124 QGYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDSRAWTD 498
QGYDP+R+ + D +L DF + G +TEVPGIGP + L EGE ++CI NT+QLIGKFL+L+ + +D K ++ +EHC+KF++WLQ K I R IV+ IA KVN PG+YD+ + D
Sbjct: 4 QGYDPKRSRVS---DDSLMDFIRAQVQGDITEVPGIGPAAAKKLAEGEHDECITNTYQLIGKFLMLKGPDTDDNK-VESMEHCEKFWYWLQDKQISAHRSAIVKAIAMKVNGLLPGVYDADLYDD 124
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: K3WZ09_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WZ09_GLOUD) HSP 1 Score: 125 bits (314), Expect = 4.590e-34 Identity = 64/120 (53.33%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 127 GYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGEGEDCIKNTFQLIGKFLVLR-TSNEEDGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDS 483
GYDP+++ + + L DF LTG LTEVPGIGP L GE D + NTFQLIGKFL+L+ S+E D L+DC HCD F++WL+SKGI R IV IAEKVN PGIYD+
Sbjct: 5 GYDPQKSRVA---EDTLADFLRAPLTGDLTEVPGIGPAAVTKLAAGEDGDQVGNTFQLIGKFLLLKKNSDENDDGLLDCAAHCDAFWFWLKSKGITAYRSGIVMAIAEKVNTMLPGIYDA 121
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: A0A8K1CPA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPA9_PYTOL) HSP 1 Score: 123 bits (309), Expect = 2.550e-33 Identity = 65/120 (54.17%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 127 GYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGEGEDCIKNTFQLIGKFLVLRTSNEE-DGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDS 483
GYDP+++ + VD L DF LTG L EVPGIG +G L GE D ++NTFQLIGKFL+L+ S EE D LIDC +HC+ F++WL++KGI R IV IAEKVN PGIYD+
Sbjct: 4 GYDPQKSRVA--VD-TLADFLRAPLTGDLKEVPGIGDIAAGKLAAGEDGDRVENTFQLIGKFLMLKASLEENDDGLIDCADHCNAFWFWLKAKGISAYRSGIVMAIAEKVNTMLPGIYDA 120
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Match: A0A7S2R0A3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0A3_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.420e-32 Identity = 62/125 (49.60%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 127 GYDPRRTGIGSGVDQALTDFTNVVLTGRLTEVPGIGPRFSGLLGEGEGE-DCIKNTFQLIGKFLVLRTSNEEDGKLIDCVEHCDKFYWWLQSKGIGGGRGRIVQCIAEKVNMSYPGIYDSRAWTD 498
GYDP R+ + D +TDF +TG +TEVPGIGP L G+ E D I NTFQLIGKFL+L+ +E+D K IDC+EH +KF++WL+ KGI R IV+ I EK+N PGIYD+ + +
Sbjct: 6 GYDPSRSKVS---DSTMTDFLRSQITGDVTEVPGIGPAAKRALAGGDDESDRITNTFQLIGKFLMLKGPDEDDMK-IDCMEHMEKFWYWLKQKGIKSHRSAIVKAIGEKINTMIPGIYDASIYAE 126 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7853.19122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7853.19122.1 >prot_Ecto-sp13_S_contig7853.19122.1 ID=prot_Ecto-sp13_S_contig7853.19122.1|Name=mRNA_Ecto-sp13_S_contig7853.19122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp PGCEALWCRGGYSRNSFDTTMHILRTRILKTSPFISLQHFIQGYDPRRTGback to top mRNA from alignment at Ecto-sp13_S_contig7853:5715..7226+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7853.19122.1 ID=mRNA_Ecto-sp13_S_contig7853.19122.1|Name=mRNA_Ecto-sp13_S_contig7853.19122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1512bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7853:5715..7226+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7853:5715..7226+ >mRNA_Ecto-sp13_S_contig7853.19122.1 ID=mRNA_Ecto-sp13_S_contig7853.19122.1|Name=mRNA_Ecto-sp13_S_contig7853.19122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7853:5715..7226+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |