mRNA_Ecto-sp13_S_contig7844.19108.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: A0A6H5KT30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT30_9PHAE) HSP 1 Score: 170 bits (431), Expect = 1.640e-49 Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 1
Query: 1 VLSHVREALPRWRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 261
VLS+VREALP WRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR
Sbjct: 90 VLSYVREALPGWRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 176
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: D7G1J0_ECTSI (Choline/ethanolamine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J0_ECTSI) HSP 1 Score: 169 bits (427), Expect = 5.690e-49 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 1
Query: 1 VLSHVREALPRWRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 261
VLS+VREALP WRTLPDGDIQLKQITGGITNVIFKARN ATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR
Sbjct: 77 VLSYVREALPGWRTLPDGDIQLKQITGGITNVIFKARNTATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 163
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: A0A6B2L936_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L936_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 1.740e-12 Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 1
Query: 19 EALPRWRTLPDGDIQLKQITGGITNVIFKA---------RNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 261
+ LP W+ +P ++ K+ITGG+TN++ K T ALVR +GKDT++ R E+ +F+ LS+ G GP+ LG F GGR
Sbjct: 10 DVLPGWKAIPTKYLETKRITGGLTNILTKVFVRPDYVPQLPPGTLHQALVRTFGKDTEVFFSRNMESLIFASLSSSGVGPKLLGTFPGGR 99
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: A0A813IQZ4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IQZ4_POLGL) HSP 1 Score: 70.9 bits (172), Expect = 2.090e-12 Identity = 37/79 (46.84%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 34 WRTLPDGDIQLKQITGGITNVIFKAR---NAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 261
WR PD D ++K ITGG+TN+++K AA LVR +GK D + DR E VF +LS GFGPR G F GR
Sbjct: 44 WREAPDADFEVKVITGGLTNLLYKVSLCCPAADPPTVLVRAFGKAGDAVCDRSMENKVFQDLSKAGFGPRLFGLFGNGR 122
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: D8LQ37_ECTSI (Choline/ethanolamine kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ37_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 2.100e-12 Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 4 LSHVREALPR--WRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 261
+ HV +++ + W P DI + I GGITN++FK + LVR++GKDTD+L+DR ++ A+F EL+++ + P G F GR
Sbjct: 20 VKHVAKSVMKGAWLDYPTEDIVVTTIGGGITNLLFKLQGPPAEAAILVRIFGKDTDVLIDRERDNALFDELASMKYAPPFHGRFSNGR 107
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: F0WP82_9STRA (Ethanolamine kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WP82_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.230e-12 Identity = 34/78 (43.59%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 28 PRWRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 261
P W+ DIQ+K ++GGITN ++ R G+ LVR+YG++T++L+DR+ E +F++LS GF P G FK GR
Sbjct: 146 PDWKNALKEDIQIKIVSGGITNQLY--RLIWMGKSLLVRIYGENTEILIDRKTENEIFAKLSREGFAPTYYGRFKNGR 221
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: A0A5J4Y5B2_9CHLO (Putative ethanolamine kinase A-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y5B2_9CHLO) HSP 1 Score: 67.8 bits (164), Expect = 2.360e-11 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 25 LPRWRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 261
LP+W +LP+ DI++ +++GGITN++ K ++ LVRV+G TD ++DR E + +L GFG LG F GR
Sbjct: 32 LPQWASLPEHDIKVTKVSGGITNMLLKMTPSSQRPPVLVRVFGDHTDEVIDRDAEETISLQLHEAGFGAEILGTFGNGR 110
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: A0A0L0H767_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H767_SPIPD) HSP 1 Score: 65.1 bits (157), Expect = 2.310e-10 Identity = 35/86 (40.70%), Postives = 45/86 (52.33%), Query Frame = 1
Query: 1 VLSHVREALPRWRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGG 258
V S + P W D++ Q T GITN + + + TGE ALVR YGK +D+L+DRR+E LS LG P G F G
Sbjct: 84 VASVIAHFFPAWNV--SRDVKFIQCTAGITNKLVRCLHQPTGESALVRCYGKGSDILIDRRQEMLNLIALSRLGLSPALYGRFHNG 167
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: D8QX93_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QX93_SELML) HSP 1 Score: 64.3 bits (155), Expect = 3.970e-10 Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 16 REALPRWRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGG 258
R + W L D D+ + +I+GGITN++ K + E VR++G +TD ++DR++E V LS FG + +G F+ G
Sbjct: 28 RALVSGWSDLGDDDLAISEISGGITNLLLKVLDKKQNEAVTVRIFGPNTDAVIDRKRELQVLPHLSESDFGAKLVGLFENG 108
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Match: A0A7S1HVN9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HVN9_9EUGL) HSP 1 Score: 63.2 bits (152), Expect = 4.110e-10 Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 28 PRWRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYGKDTDLLLDRRKEAAVFSELSTLGFGPRKLGEFKGGR 261
P WRT+ ++++ QI+GGITN+++K A LVRVYG +TD+++DR KE + +LS + F G F GR
Sbjct: 41 PEWRTVNIDEMKVDQISGGITNLLYKVSGPAVP--LLVRVYGDNTDVIIDRAKETNMLKQLSDVEFAVPFYGTFGNGR 116 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7844.19108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7844.19108.1 >prot_Ecto-sp13_S_contig7844.19108.1 ID=prot_Ecto-sp13_S_contig7844.19108.1|Name=mRNA_Ecto-sp13_S_contig7844.19108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp VLSHVREALPRWRTLPDGDIQLKQITGGITNVIFKARNAATGEGALVRVYback to top mRNA from alignment at Ecto-sp13_S_contig7844:5412..6867+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7844.19108.1 ID=mRNA_Ecto-sp13_S_contig7844.19108.1|Name=mRNA_Ecto-sp13_S_contig7844.19108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7844:5412..6867+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7844:5412..6867+ >mRNA_Ecto-sp13_S_contig7844.19108.1 ID=mRNA_Ecto-sp13_S_contig7844.19108.1|Name=mRNA_Ecto-sp13_S_contig7844.19108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=264bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7844:5412..6867+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |