mRNA_Ecto-sp13_S_contig784.19096.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig784.19096.1
Unique NamemRNA_Ecto-sp13_S_contig784.19096.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: D8LEZ0_ECTSI (SGNH_hydro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ0_ECTSI)

HSP 1 Score: 602 bits (1553), Expect = 5.460e-212
Identity = 305/321 (95.02%), Postives = 311/321 (96.88%), Query Frame = 3
Query:   42 MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSAT--KGGQPVEVVKMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGASGAAVAPISGEGFEPKSKAHKKAD 998
            MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVA+FRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQS ACRDAEIFVVALGTMDVVN+CVGMPVSAMRKTALDTFEEGEICDTV NLREICDALRAEGKKVVVCNVMTSGAG+NRR GTAKRINRQLALYGKATATAT    T  KGGQPVEVVKMNNPRAAREDGRAFDGLHLN+RGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGA GAAVAPISGEGFEPKSK++KKAD
Sbjct:    1 MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVADFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSEACRDAEIFVVALGTMDVVNDCVGMPVSAMRKTALDTFEEGEICDTVKNLREICDALRAEGKKVVVCNVMTSGAGINRRTGTAKRINRQLALYGKATATATAKGETAPKGGQPVEVVKMNNPRAAREDGRAFDGLHLNARGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGAGGAAVAPISGEGFEPKSKSNKKAD 321          
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A6G0XR96_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR96_9STRA)

HSP 1 Score: 145 bits (367), Expect = 6.470e-36
Identity = 95/278 (34.17%), Postives = 136/278 (48.92%), Query Frame = 3
Query:   75 YLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDE-KVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
            Y+ VA+R      W+R+ ++  +P  +I P   FRHK+V+IGDGFA G GDWV M    G+ R +  E   +E KVR  W +INRG   + SS W P+     +         RDA+I +V +G+MD           + R   +   +      TV N++ ICDALR +GK+V +  +  S          A   N+QL  Y       T G       PV++   ++ P   R D +AFDG H NS+ Y+  A     V+ PM+ AVEW  WK +L
Sbjct:    7 YIYVAIRTFFAWIWLRLCRWCAQPLRLILPSNEFRHKIVIIGDGFAAGFGDWVTMDSPGGLARYIANEIAQEESKVRHKWQVINRGILDTDSSQWHPTASTKYFQDTFSKHQLRDADIVLVIVGSMD-----------SKRSPPIPPSQ------TVTNIQSICDALRKKGKRVCIGTLCHSDVEAQNEIHRAT--NKQLLEY----CNETSGDDL----PVKMTPDLSLPIVRRPDAKAFDGFHFNSKAYQQIAHEAMTVLTPMLTAVEWITWKKQL 257          
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: W4FUK0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUK0_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.880e-35
Identity = 88/281 (31.32%), Postives = 144/281 (51.25%), Query Frame = 3
Query:   78 LLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVV-----CNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
            L VA+R  +   W+R  ++  +P  ++     + HK+V+IGDGFA G GDW+ M  + G++  +  E   ++K+R  W +INRG   + SS W P+     +   + +   RDA++ +V +G+MD           A RKT   + ++     T+ N++ ICDALR +GK+V V      +V+T   G        + IN+ L  +  +TAT           PV++   ++ P   R D +AFDG H N++ Y+  A     V+ P++ AVEW  WK +L
Sbjct:    4 LYVAVRTFIAWLWLRFCRWCAQPLRLVLKSNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSSTKYFQSVMSTPQLRDADVVLVVVGSMD-----------ARRKTPSISPDQ-----TLRNIQAICDALRKKGKRVCVGSLCHSDVVTECDGH-------RSINQALVDFCASTATDA--------FPVKITPDLSTPVVRRSDAKAFDGFHFNAKAYQQIARDSMMVLTPLLTAVEWSTWKKQL 253          
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A024U869_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U869_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.200e-35
Identity = 89/280 (31.79%), Postives = 145/280 (51.79%), Query Frame = 3
Query:   66 LTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
            L  Y+ VA+R A    W+R  ++L +P  ++     ++HK+V+IGDGFA G GDW+ M  + G+++ L +E   ++K+R  W +INRG   + SS W P+     +         RDA+I +V +G++D           + RK    + E+     TV N++ ICDALR +GK+V V ++    A  +    T +  N+ L  Y ++T             PV++   ++ P   R D +AFDG H N++ Y+  A     V+ P++ AVEW  WK +L
Sbjct:    4 LVLYVYVAVRTAAAWLWLRFCRWLTQPLRLVLKANEYQHKIVIIGDGFAAGFGDWITMATSGGLSQYLAQEVAKEDKIRHRWQVINRGILDTDSSQWHPTSSTKYFQDVFSVPQLRDADIVMVIVGSID-----------SRRKNPSISPEQ-----TVCNIQAICDALRKKGKRVCVGSLCH--ADFDTENETHRVTNQALVDYCEST--------KMDDLPVKLTPDLSTPVVRRSDSKAFDGYHFNAKAYQQIARDSMAVLTPLLTAVEWATWKKQL 257          
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A485L2D1_9STRA (Aste57867_14724 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2D1_9STRA)

HSP 1 Score: 137 bits (344), Expect = 9.790e-33
Identity = 85/280 (30.36%), Postives = 135/280 (48.21%), Query Frame = 3
Query:   75 YLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVV---CNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
            Y+ V +R      W+R  +++ +P  ++     F HK+V+IGDGFA G GDWV M    G+ + + KE  ++ K+R  W +INRG   S S+DW P+     +     +   RDAE+ +V +G++D+                   +      +T+ N++ ICDAL  +GK+V V   C++             A R+  +  L        T  SA +   P+++   ++ P   R D +AFDG H NS+ Y+  A     V+ P + AVEW  WK KL
Sbjct:    8 YIYVTVRTFFAWLWLRYCRWVAQPIRLVPRSNEFVHKIVIIGDGFAAGFGDWVTMDSAGGLAQYIAKEIVNEPKIRHKWKVINRGILNSDSADWHPTSQTKYFQDVFSTRQLRDAEVVLVIVGSIDIRR-----------------YPRIPAAETLKNIQSICDALTKKGKRVCVGSLCHIDIEAQN------EAHRLENKAILD-----LCTDTSADE--LPIKMAPDLSTPIVRRADSKAFDGFHFNSKAYQQIARDTMTVLTPTLTAVEWTTWKKKL 257          
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: T0QG23_SAPDV (SGNH_hydro domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG23_SAPDV)

HSP 1 Score: 135 bits (341), Expect = 2.470e-32
Identity = 85/278 (30.58%), Postives = 130/278 (46.76%), Query Frame = 3
Query:   75 YLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGA-GLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
            YL V +R      W+R+ +++ +P   I P + +RHK+V+IGDGFA G GD++      G+ + L      + K+R  W +INRG   + SS W P      +         RDA+I +V +G+MD           A R   +    E E+  T+ N++ ICDAL  +GK+V V  +  S    +N +     ++ R   +                  PV     +  P   R + +AFDG+H NS GY+  A    +V+ P+  AVEW  WK KL
Sbjct:    7 YLYVIVRSYCAWLWLRLCRWIQQPPRAILPTSEYRHKIVIIGDGFAAGYGDYINFDSPGGLAKYLHAAMAQEAKIRHNWQVINRGIVDTDSSQWTPMADTKYFQTVFSKKEYRDADIVLVVVGSMD-----------AQRSPPI----EPEV--TLRNIKSICDALTKKGKRVAVGTLCHSDIKAINVKHTATNKLLRDFCV-----------DTQHDELPVMCAPDLAIPMVRRPEAKAFDGIHFNSSGYKQIAKDAMDVIQPLATAVEWTTWKKKL 256          
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A0W8C468_PHYNI (SGNH_hydro domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C468_PHYNI)

HSP 1 Score: 134 bits (338), Expect = 6.530e-32
Identity = 94/285 (32.98%), Postives = 138/285 (48.42%), Query Frame = 3
Query:   78 LLVALRRALTVTWIRINKFLMKPDWV--IRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAG-VTRMLEKEAGSDEK----VRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVV---KMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
            +LVALR  L + W  I  FL     V  ++P + F HKVV+IGD FA G+GD++ +GG  G + + L+K    D+K    VR  W IIN G  GS ++DWL S PK  +     S+   DA I ++ LG+ ++ N                   E EI     NL EICD LR +GK+V +  V++     +     +  +N  L  + K+T+T          +   V+   +++     RE    +D  H NS+ YR  A    + + PMM AVEW  WK +L
Sbjct:    1 MLVALRAFLALVWWHICHFLAYNLHVRGLKPSSQFFHKVVIIGDDFAAGIGDYITIGGAGGGIAQYLKKIVAYDDKASGAVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSSVMSDASIVIIILGSTEIRNSGTA---------------EHEI---KRNLMEICDTLRKKGKQVCLATVVSPEPTASEMDSASSTLNTALEQFCKSTST----------EEAPVILGPRLDTYAFRRESALCYDKYHFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQL 257          
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A2D4BF39_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF39_PYTIN)

HSP 1 Score: 133 bits (334), Expect = 3.920e-31
Identity = 92/293 (31.40%), Postives = 147/293 (50.17%), Query Frame = 3
Query:   66 LTSYLLVALRRALTVTWIRINKFLMKP--DWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKT-------ALDTFEEGEICDTV---NNLREICDALRAEGKKVVVCNVMT-SGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEV-VKMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
            + S  + ++R  LT+ W++I ++++    D  ++P   F HK+V+IGD FA GVGD++V+GG AG+ + L       +KVR  W ++NRG  GS + DWL + P       + S A RDAE+ +V LG+ +    CV + +  + ++        +D       C       NL  ICD LR +GK V +  + + S  G + +      +N  L  +      +T+G  T    PV +  +++     RE   AFD  HL S GY+  A    + + P+M  VEWK WK +L
Sbjct:    1 MASAXVTSIRLYLTLLWLKICRWVVHALYDRSLKPTDQFFHKIVVIGDDFAAGVGDYLVLGGNAGLAQHLPHAIAQSDKVRHRWAVVNRGVVGSTTGDWLLNAPTKYMDDILSSKATRDAEVVIVVLGSQEY--RCVPVRLHTLPRSWITDEIVGMDRNRSQPSCQVGVMHKNLVAICDTLRKKGKHVCLATIASPSPLGQDEKI----PLNAMLEEF----CASTKGDDT----PVVLGPRLDTYAFRRESLLAFDSYHLCSNGYKVLARNTADFLVPIMTGVEWKTWKKQL 279          
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A329T1V1_9STRA (SGNH_hydro domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1V1_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.010e-30
Identity = 89/281 (31.67%), Postives = 135/281 (48.04%), Query Frame = 3
Query:   78 LLVALRRALTVTWIRINKFLMKPDWV--IRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAG-VTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVV---KMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
            +L  LR  L + W  I  FL     V  + P + F HKVV+IGD FA G+GD++ +G   G +   L+K    D+KVR  W IIN G  GS ++DWL S PK  +     S A  D  I ++ LG+ ++            R ++ D  E        ++L EICD LR +GK+V +  V +     +     +  +N  L  + K+T+T          +   V+   +++     RE   ++D  H NS+ YR  A    + + PMM AVEW  WK++L
Sbjct:    1 MLATLRAFLALLWWYICHFLAYNLHVRGLNPASQFFHKVVIIGDDFAAGIGDYISVGSAGGGIAEYLKKIVAFDDKVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSRAMSDVSIVIIILGSAEI------------RNSSSDGHE------MKHHLMEICDTLRKKGKQVCLATVASPDPTASETDSASSTLNTALEQFCKSTST----------EEAPVILGPRLDTYAFRRESALSYDKYHFNSQSYRQLACNTADFLIPMMTAVEWTTWKAQL 253          
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A6A3RM93_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RM93_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.010e-30
Identity = 92/278 (33.09%), Postives = 133/278 (47.84%), Query Frame = 3
Query:   78 LLVALRRALTVTWIRINKFLMKPDWV--IRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAG-VTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVKMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
            +L ALR  L + W  I  FL     V  ++P + F HKVV+IGD FA GVGD+V +G   G +   L+K    D+KVR  W IIN G  GS ++DWL S PK  ++    S A  DA I ++ LG++++ N     P +A  +                NL EICD LR +GK+V +  V +           +  +N  L  + K+T       +T+    +   +++     RE     D    NS+ YR  A    + + PMM AVEW  WK +L
Sbjct:    1 MLEALRVFLALVWWHICHFLAHNLHVRGLKPASQFFHKVVIIGDDFAAGVGDYVTVGSAGGGIAPYLKKIVSHDDKVRHNWAIINAGVPGSTTADWLLSSPKKYFNNVFTSRAMADASIVIIILGSVEIRN-----PAAAGHEMR-------------RNLVEICDTLRKKGKQVCLATVASPDPTATETDSASSTLNTALEHFCKST-------STEDAPVILGPRLDTYAFRRESALWIDKYRFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQL 253          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ0_ECTSI5.460e-21295.02SGNH_hydro domain-containing protein n=2 Tax=Ectoc... [more]
A0A6G0XR96_9STRA6.470e-3634.17SGNH_hydro domain-containing protein n=1 Tax=Aphan... [more]
W4FUK0_9STRA2.880e-3531.32SGNH_hydro domain-containing protein n=3 Tax=Aphan... [more]
A0A024U869_9STRA3.200e-3531.79SGNH_hydro domain-containing protein n=1 Tax=Aphan... [more]
A0A485L2D1_9STRA9.790e-3330.36Aste57867_14724 protein n=1 Tax=Aphanomyces stella... [more]
T0QG23_SAPDV2.470e-3230.58SGNH_hydro domain-containing protein n=1 Tax=Sapro... [more]
A0A0W8C468_PHYNI6.530e-3232.98SGNH_hydro domain-containing protein n=15 Tax=Phyt... [more]
A0A2D4BF39_PYTIN3.920e-3131.40Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A329T1V1_9STRA1.010e-3031.67SGNH_hydro domain-containing protein n=2 Tax=Phyto... [more]
A0A6A3RM93_9STRA1.010e-3033.09Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig784contigEcto-sp13_S_contig784:5283..9261 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score606.3
Seed ortholog evalue8.3e-171
Seed eggNOG ortholog2880.D8LEZ0
Model size1893
Hectar predicted targeting categorysignal peptide
Exons5
EggNOG OGs2AVME@1,2RZWN@2759
Ec32 ortholog descriptionSGNH hydrolase-type esterase domain
Ec32 orthologEc-21_006070.1
Cds size960
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig784.19096.1prot_Ecto-sp13_S_contig784.19096.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig784 6175..9220 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464054.5111358-UTR-Ecto-sp13_S_contig784:5282..61741681464054.5111358-UTR-Ecto-sp13_S_contig784:5282..6174Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig784 5283..6174 -
1681464054.5821798-UTR-Ecto-sp13_S_contig784:9220..92611681464054.5821798-UTR-Ecto-sp13_S_contig784:9220..9261Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig784 9221..9261 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464054.5277843-CDS-Ecto-sp13_S_contig784:6174..65851681464054.5277843-CDS-Ecto-sp13_S_contig784:6174..6585Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 6175..6585 -
1681464054.539641-CDS-Ecto-sp13_S_contig784:6868..70841681464054.539641-CDS-Ecto-sp13_S_contig784:6868..7084Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 6869..7084 -
1681464054.5511994-CDS-Ecto-sp13_S_contig784:7692..77701681464054.5511994-CDS-Ecto-sp13_S_contig784:7692..7770Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 7693..7770 -
1681464054.5617812-CDS-Ecto-sp13_S_contig784:8482..85931681464054.5617812-CDS-Ecto-sp13_S_contig784:8482..8593Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 8483..8593 -
1681464054.5721555-CDS-Ecto-sp13_S_contig784:9076..92201681464054.5721555-CDS-Ecto-sp13_S_contig784:9076..9220Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 9077..9220 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig784.19096.1

>prot_Ecto-sp13_S_contig784.19096.1 ID=prot_Ecto-sp13_S_contig784.19096.1|Name=mRNA_Ecto-sp13_S_contig784.19096.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=320bp
MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVV
LIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGS
LSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAM
RKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRA
GTAKRINRQLALYGKATATATRGSATKGGQPVEVVKMNNPRAAREDGRAF
DGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGASGAAV
APISGEGFEPKSKAHKKAD*
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mRNA from alignment at Ecto-sp13_S_contig784:5283..9261-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig784.19096.1 ID=mRNA_Ecto-sp13_S_contig784.19096.1|Name=mRNA_Ecto-sp13_S_contig784.19096.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3979bp|location=Sequence derived from alignment at Ecto-sp13_S_contig784:5283..9261- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGTTAGGAAAACGAGCTGCGCGGTCGAAGCAGCGACAAGATGGCGACG CGAGAGTTCTGGTTGCTCACGTCATATCTCTTGGTTGCCTTGAGACGGGC GTTGACGGTGACATGGATTCGGATCAACAAGTTCCTCATGAAGCCCGACT GGGTGATTCGACCCGTGGCCAATTTTCGACACAAGGTGTGGTTCACTCAG CCGTCCCCTCGATTTCCCGAGCTTTGGTAGGCGTGGAAGATGAAAACTTG CTTGCGAAGTAGACACCCAAACGCGGAGGGTCTCTGCCCGCTCGTGTTGA CTTTTCATCTTCAATTCCGCCTTGCAGTGCAGAGCGTTACTGTTCTGCTG AGATCGGGACAGCAGTAGGTACACAGCAGTAGGTTACAGCAGCAGTTGTA GAGATACGCTTGGGTTCATCTTGCAGCAAGGCCCTACAAAAGTTCAATCG CTAGTGAGACTTGTGACTCTCATCTTCAATTGTTACTGTTCTGTGAGATC AGCAGCTACACAGCGAGCGGTAGTTTACCTTTTAGCAGGAGAGGTATGAA ATGGGTTCATCCTACTGCAAGCCCCTACAGTCATTCAATCACAACCGAGA CTTGTCCTTGGCGCAAAAGCGCGCCCTTGCTGAGGCAGACCCTCGGTTGC ACGTGATGCTCGTTTCAGGTGGTGCTAATCGGAGATGGCTTCGCCGAGGG CGTCGGAGATTGGGTTGTAATGGGGGGAACGGCTGGCGTTACGCGGATGC TCGAAAAGGAAGCGGGATCGGACGAAAAGGTGATCATGTTGGAGTTGCAC CTTGAATGATGACGTGCGCTTTAGGTGAGACGGCCGCTATCATACCCGGG CCTATTGGGGGTTAGACTATGAATCCGATATCATGTTGAACACCAAAGTT TTGAATTCGTACACAGAAACAGCAGTGCCCTTTTACGTAAGTACATACAC ATTCAAGACGTGTGGGGACCACCCATCGGTAAAATCAGAACTCAAGGGTC GGGGTTAGGTTTACGGTTAGGGCTAGAGACCAGAACAGGGAACCTTTCAC AAACCTTTTCTTTTTGCCTGCATCGGTACCTTTCGTTTCAGCGCTCACAA CAACCTTGGCAGCATGACACACAGCACTCTCACGGGCGTACGTAGACCAT TACTGTAGGCGCATGCCAAGCTTACCCGCCCATCCCCTTCCATCGTCAAA CACGAACATAAGCGTTATATGTACTCTCCTACCGACCTTTTTTTCATCAT TCTTCTACCGTACCGTTTCGCTTGTGACCGGCCATCGCTCTGTTATATTT CTCTCGTCCTTTCTGTCTTTTGTCTGTGTCTTTTACCCACACCCACTTTC AATCGTCAAACATAGGCATGACATTCTCTCCCGCCAGTCTTTTTTTTTGT CTTCCTTCCACTTGTTCAAACTTTGTTGCATCTCTCCTGTCTTTCTATTG TCTGTCTGTCTGTCTATCTATCTACCTGGGGGGCAACGTAGGTGCGCACG TGCTGGCACATCATCAACCGAGGACGGGCTGGGAGCTTGTCTTCCGATTG GCTGCCATCCGACCCAAAGGTACCCTCATGATTTTTCAACCATAGCCTTA TGTCAAACACTGATTTGTTGAACGCTGGGAAAAAACGTCCTGTTCCAGAG ACATTGCCGTTGTTGCCAAAGGGTTTTGAAACGTAAACACCGGCACCCGC AGGTCCGCAAGTGTGTCGACGAGATCGGAGCGCCGACAACGTCTCATTGT TGCCGTACCGCAGTGCTCCTCGTCTCCCTCGTCGTGCAATGGTATCGAGA AGCCAGCAGCCGAGAGATCGCTCTAATGCGCTTGTCTCGCTCAAGAGAAG CTCGTCACACACTGAACATGACATCAGGGGGAGCGTTTTGTTCTTGCTCG CTGCTAAGACGACGAAAAATACCACAAATCGCACTAATTGACAGTTTTTC CCGCGCCCTGTCGTAATCGTAAGGTACACGTGCCATACTTCCATACCTGT TAATCCACCGCAAAGATGCCCCAACACGAAAGCAACAAACTGTTTCGCTT CTCTCCCCTATATCGCTCCGTCACATCGTAAGGATGCGAGGCCTATGATC TAACGACAACGTCGTGCGTTTACATGAGTACCCCCCCCCCCCTCTCGGCG CATCATCTTATGTGTGAATGTTTTCAGTCGCTATACCACCGAAAGGTGCA GTCTGCAGCCTGCAGGGACGCAGAGATATTCGTGGTGGCGCTGGGTACGA TGGACGTGGTCAACGAGTGCGTGGGCATGCCCGTCTCAGCCATGCGAAAA ACCGCCCTCGACACCTTCGAGGAGGGAGAGATCTGCGACACGGTCAATAA CCTCAGGGAGATCTGCGACGCTCTCAGGGCTGAAGGGAAGAAGGTGCGGG CTTGGTGTGGTTGTTCGATTGGAAGGGAGGGGGCTGGGTAGGCGGGTTGT CCAGAGTAGCTATTGTCTAGTCTACGTGACTACCATCTCTTGAGGTCGAG TGTTGGTCCGGAGCAACCACATCATCAGTAGTATTTCTCGAACAGGCTGC TCGCGTTGGCAGCCCTCAAGTCCCTACACAGAACTCAACTCCCGGGACAC AGGAACAGCACGCCGAAAGTCCTCACACTCCTCGGGCACCAACCTTCTAC GGCACCGACCGTTGTTTCCTTCGCAGGTAGTCGTTTGCAACGTGATGACG TCCGGTGCTGGCCTCAACCGCCGCGCGGGCACAGCCAAGCGCATCAATCG ACAGCTCGCGCTATACGGCAAGGCAACAGCAACAGCAACAAGAGGGTCCG CAACCAAGGGCGGACAACCGGTGGAGGTGGTGAAGATGAACAACCCTCGA GCGGCAAGAGAAGACGGCCGAGCTTTCGACGGCCTCCATCTCAACTCCCG CGGGTACCGCGCGTTCGCCAGCGCAGTGTACGAAGTGGTAGGCCCGATGA TGGTTGCAGTGGAGTGGAAGGTCTGGAAGTCCAAGCTAGCGGCGGGTTTG ACCAACGGGGCTAGCGGCGCGGCCGTGGCGCCAATCTCCGGAGAGGGCTT CGAGCCAAAGAGCAAGGCCCACAAGAAGGCGGACTAACTACCGCCGGTGA CGTGAGATATCACATCCCCCTGGACCGATTTTCAAATCGCGATTTCTCGG CAGGACGGTGCCGGGGATGGCAGCGTTGGAAACTGTCTCGTCGAGAGCGT TGGAACTGTCTTGTCGAGAGCTTTCCGAAAATGTGTCGTTTGACTTCGGT ATGCCCTCTTTGTCGTGGAACAACAGAGGTTTGAAGTTCGGCCCAGGGGG TGTGGTATCTTATGCAACCTACGGTTGTTGGGGAGAGGCGAGCCATCTTG TTTGGAGGAATATGATCGGGGGAGAACGATTGGACGTAGCTGGGGGCGGG GTATTCGTTGACGGGAGCAGCTGTGGCGTGAACGAACATGTGTGCAGGAG CATATTTTGGGTGCCGAGACCTGCTGCGCCGTCATGCTCATTGGGTTGTC GTGGCACGGACCTCCTGGCGTCATGCCGGCGAACCTCACGTATCAGTGTC TCGGGGTTTGGACCAGCTATGGGGCTTGACGTTCTACTAAGCAAGAGCTT GGATGCGGTCAAGGGTGGTTTATTACGATCGCTCTCACCGGCTGGTATTG CCCTTGGGCATTTTCGGTGTACGCGTTCCGACGCCGGAGTGGATCAAAAA GCTACCCGTGATTGAAGCTTTTGCTCTTTTGTTGTGTCGACGTACATGTC GAAAGAGCTTTTCATACGCGCACGTTGAATTATTTCACCACCGGTGGTTT GAAGCACCGAGGTTGCTGTCATAAAGGCGGCATGCTGTGTAAGGTGTACA CACACGCGGGTGGACGAACAAAAAGAGTGTGGAAACGGGAAGCGCTCGTT GGAAGCGGCTGATGACACTTTCTTCGACCCGCCCCTGTCCGGCCTGCAGT TGTACACAGCAATACATGCACAACCAACA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig784:5283..9261-

>mRNA_Ecto-sp13_S_contig784.19096.1 ID=mRNA_Ecto-sp13_S_contig784.19096.1|Name=mRNA_Ecto-sp13_S_contig784.19096.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=960bp|location=Sequence derived from alignment at Ecto-sp13_S_contig784:5283..9261- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGACGCGAGAGTTCTGGTTGCTCACGTCATATCTCTTGGTTGCCTT
GAGACGGGCGTTGACGGTGACATGGATTCGGATCAACAAGTTCCTCATGA
AGCCCGACTGGGTGATTCGACCCGTGGCCAATTTTCGACACAAGGTGGTG
CTAATCGGAGATGGCTTCGCCGAGGGCGTCGGAGATTGGGTTGTAATGGG
GGGAACGGCTGGCGTTACGCGGATGCTCGAAAAGGAAGCGGGATCGGACG
AAAAGGTGCGCACGTGCTGGCACATCATCAACCGAGGACGGGCTGGGAGC
TTGTCTTCCGATTGGCTGCCATCCGACCCAAAGTCGCTATACCACCGAAA
GGTGCAGTCTGCAGCCTGCAGGGACGCAGAGATATTCGTGGTGGCGCTGG
GTACGATGGACGTGGTCAACGAGTGCGTGGGCATGCCCGTCTCAGCCATG
CGAAAAACCGCCCTCGACACCTTCGAGGAGGGAGAGATCTGCGACACGGT
CAATAACCTCAGGGAGATCTGCGACGCTCTCAGGGCTGAAGGGAAGAAGG
TAGTCGTTTGCAACGTGATGACGTCCGGTGCTGGCCTCAACCGCCGCGCG
GGCACAGCCAAGCGCATCAATCGACAGCTCGCGCTATACGGCAAGGCAAC
AGCAACAGCAACAAGAGGGTCCGCAACCAAGGGCGGACAACCGGTGGAGG
TGGTGAAGATGAACAACCCTCGAGCGGCAAGAGAAGACGGCCGAGCTTTC
GACGGCCTCCATCTCAACTCCCGCGGGTACCGCGCGTTCGCCAGCGCAGT
GTACGAAGTGGTAGGCCCGATGATGGTTGCAGTGGAGTGGAAGGTCTGGA
AGTCCAAGCTAGCGGCGGGTTTGACCAACGGGGCTAGCGGCGCGGCCGTG
GCGCCAATCTCCGGAGAGGGCTTCGAGCCAAAGAGCAAGGCCCACAAGAA
GGCGGACTAA
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