mRNA_Ecto-sp13_S_contig784.19096.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: D8LEZ0_ECTSI (SGNH_hydro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ0_ECTSI) HSP 1 Score: 602 bits (1553), Expect = 5.460e-212 Identity = 305/321 (95.02%), Postives = 311/321 (96.88%), Query Frame = 3
Query: 42 MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSAT--KGGQPVEVVKMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGASGAAVAPISGEGFEPKSKAHKKAD 998
MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVA+FRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQS ACRDAEIFVVALGTMDVVN+CVGMPVSAMRKTALDTFEEGEICDTV NLREICDALRAEGKKVVVCNVMTSGAG+NRR GTAKRINRQLALYGKATATAT T KGGQPVEVVKMNNPRAAREDGRAFDGLHLN+RGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGA GAAVAPISGEGFEPKSK++KKAD
Sbjct: 1 MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVADFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSEACRDAEIFVVALGTMDVVNDCVGMPVSAMRKTALDTFEEGEICDTVKNLREICDALRAEGKKVVVCNVMTSGAGINRRTGTAKRINRQLALYGKATATATAKGETAPKGGQPVEVVKMNNPRAAREDGRAFDGLHLNARGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGAGGAAVAPISGEGFEPKSKSNKKAD 321
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A6G0XR96_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR96_9STRA) HSP 1 Score: 145 bits (367), Expect = 6.470e-36 Identity = 95/278 (34.17%), Postives = 136/278 (48.92%), Query Frame = 3
Query: 75 YLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDE-KVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
Y+ VA+R W+R+ ++ +P +I P FRHK+V+IGDGFA G GDWV M G+ R + E +E KVR W +INRG + SS W P+ + RDA+I +V +G+MD + R + + TV N++ ICDALR +GK+V + + S A N+QL Y T G PV++ ++ P R D +AFDG H NS+ Y+ A V+ PM+ AVEW WK +L
Sbjct: 7 YIYVAIRTFFAWIWLRLCRWCAQPLRLILPSNEFRHKIVIIGDGFAAGFGDWVTMDSPGGLARYIANEIAQEESKVRHKWQVINRGILDTDSSQWHPTASTKYFQDTFSKHQLRDADIVLVIVGSMD-----------SKRSPPIPPSQ------TVTNIQSICDALRKKGKRVCIGTLCHSDVEAQNEIHRAT--NKQLLEY----CNETSGDDL----PVKMTPDLSLPIVRRPDAKAFDGFHFNSKAYQQIAHEAMTVLTPMLTAVEWITWKKQL 257
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: W4FUK0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUK0_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.880e-35 Identity = 88/281 (31.32%), Postives = 144/281 (51.25%), Query Frame = 3
Query: 78 LLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVV-----CNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
L VA+R + W+R ++ +P ++ + HK+V+IGDGFA G GDW+ M + G++ + E ++K+R W +INRG + SS W P+ + + + RDA++ +V +G+MD A RKT + ++ T+ N++ ICDALR +GK+V V +V+T G + IN+ L + +TAT PV++ ++ P R D +AFDG H N++ Y+ A V+ P++ AVEW WK +L
Sbjct: 4 LYVAVRTFIAWLWLRFCRWCAQPLRLVLKSNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSSTKYFQSVMSTPQLRDADVVLVVVGSMD-----------ARRKTPSISPDQ-----TLRNIQAICDALRKKGKRVCVGSLCHSDVVTECDGH-------RSINQALVDFCASTATDA--------FPVKITPDLSTPVVRRSDAKAFDGFHFNAKAYQQIARDSMMVLTPLLTAVEWSTWKKQL 253
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A024U869_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U869_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.200e-35 Identity = 89/280 (31.79%), Postives = 145/280 (51.79%), Query Frame = 3
Query: 66 LTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
L Y+ VA+R A W+R ++L +P ++ ++HK+V+IGDGFA G GDW+ M + G+++ L +E ++K+R W +INRG + SS W P+ + RDA+I +V +G++D + RK + E+ TV N++ ICDALR +GK+V V ++ A + T + N+ L Y ++T PV++ ++ P R D +AFDG H N++ Y+ A V+ P++ AVEW WK +L
Sbjct: 4 LVLYVYVAVRTAAAWLWLRFCRWLTQPLRLVLKANEYQHKIVIIGDGFAAGFGDWITMATSGGLSQYLAQEVAKEDKIRHRWQVINRGILDTDSSQWHPTSSTKYFQDVFSVPQLRDADIVMVIVGSID-----------SRRKNPSISPEQ-----TVCNIQAICDALRKKGKRVCVGSLCH--ADFDTENETHRVTNQALVDYCEST--------KMDDLPVKLTPDLSTPVVRRSDSKAFDGYHFNAKAYQQIARDSMAVLTPLLTAVEWATWKKQL 257
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A485L2D1_9STRA (Aste57867_14724 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2D1_9STRA) HSP 1 Score: 137 bits (344), Expect = 9.790e-33 Identity = 85/280 (30.36%), Postives = 135/280 (48.21%), Query Frame = 3
Query: 75 YLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVV---CNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
Y+ V +R W+R +++ +P ++ F HK+V+IGDGFA G GDWV M G+ + + KE ++ K+R W +INRG S S+DW P+ + + RDAE+ +V +G++D+ + +T+ N++ ICDAL +GK+V V C++ A R+ + L T SA + P+++ ++ P R D +AFDG H NS+ Y+ A V+ P + AVEW WK KL
Sbjct: 8 YIYVTVRTFFAWLWLRYCRWVAQPIRLVPRSNEFVHKIVIIGDGFAAGFGDWVTMDSAGGLAQYIAKEIVNEPKIRHKWKVINRGILNSDSADWHPTSQTKYFQDVFSTRQLRDAEVVLVIVGSIDIRR-----------------YPRIPAAETLKNIQSICDALTKKGKRVCVGSLCHIDIEAQN------EAHRLENKAILD-----LCTDTSADE--LPIKMAPDLSTPIVRRADSKAFDGFHFNSKAYQQIARDTMTVLTPTLTAVEWTTWKKKL 257
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: T0QG23_SAPDV (SGNH_hydro domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG23_SAPDV) HSP 1 Score: 135 bits (341), Expect = 2.470e-32 Identity = 85/278 (30.58%), Postives = 130/278 (46.76%), Query Frame = 3
Query: 75 YLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGA-GLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVK-MNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
YL V +R W+R+ +++ +P I P + +RHK+V+IGDGFA G GD++ G+ + L + K+R W +INRG + SS W P + RDA+I +V +G+MD A R + E E+ T+ N++ ICDAL +GK+V V + S +N + ++ R + PV + P R + +AFDG+H NS GY+ A +V+ P+ AVEW WK KL
Sbjct: 7 YLYVIVRSYCAWLWLRLCRWIQQPPRAILPTSEYRHKIVIIGDGFAAGYGDYINFDSPGGLAKYLHAAMAQEAKIRHNWQVINRGIVDTDSSQWTPMADTKYFQTVFSKKEYRDADIVLVVVGSMD-----------AQRSPPI----EPEV--TLRNIKSICDALTKKGKRVAVGTLCHSDIKAINVKHTATNKLLRDFCV-----------DTQHDELPVMCAPDLAIPMVRRPEAKAFDGIHFNSSGYKQIAKDAMDVIQPLATAVEWTTWKKKL 256
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A0W8C468_PHYNI (SGNH_hydro domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C468_PHYNI) HSP 1 Score: 134 bits (338), Expect = 6.530e-32 Identity = 94/285 (32.98%), Postives = 138/285 (48.42%), Query Frame = 3
Query: 78 LLVALRRALTVTWIRINKFLMKPDWV--IRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAG-VTRMLEKEAGSDEK----VRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVV---KMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
+LVALR L + W I FL V ++P + F HKVV+IGD FA G+GD++ +GG G + + L+K D+K VR W IIN G GS ++DWL S PK + S+ DA I ++ LG+ ++ N E EI NL EICD LR +GK+V + V++ + + +N L + K+T+T + V+ +++ RE +D H NS+ YR A + + PMM AVEW WK +L
Sbjct: 1 MLVALRAFLALVWWHICHFLAYNLHVRGLKPSSQFFHKVVIIGDDFAAGIGDYITIGGAGGGIAQYLKKIVAYDDKASGAVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSSVMSDASIVIIILGSTEIRNSGTA---------------EHEI---KRNLMEICDTLRKKGKQVCLATVVSPEPTASEMDSASSTLNTALEQFCKSTST----------EEAPVILGPRLDTYAFRRESALCYDKYHFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQL 257
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A2D4BF39_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF39_PYTIN) HSP 1 Score: 133 bits (334), Expect = 3.920e-31 Identity = 92/293 (31.40%), Postives = 147/293 (50.17%), Query Frame = 3
Query: 66 LTSYLLVALRRALTVTWIRINKFLMKP--DWVIRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKT-------ALDTFEEGEICDTV---NNLREICDALRAEGKKVVVCNVMT-SGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEV-VKMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
+ S + ++R LT+ W++I ++++ D ++P F HK+V+IGD FA GVGD++V+GG AG+ + L +KVR W ++NRG GS + DWL + P + S A RDAE+ +V LG+ + CV + + + ++ +D C NL ICD LR +GK V + + + S G + + +N L + +T+G T PV + +++ RE AFD HL S GY+ A + + P+M VEWK WK +L
Sbjct: 1 MASAXVTSIRLYLTLLWLKICRWVVHALYDRSLKPTDQFFHKIVVIGDDFAAGVGDYLVLGGNAGLAQHLPHAIAQSDKVRHRWAVVNRGVVGSTTGDWLLNAPTKYMDDILSSKATRDAEVVIVVLGSQEY--RCVPVRLHTLPRSWITDEIVGMDRNRSQPSCQVGVMHKNLVAICDTLRKKGKHVCLATIASPSPLGQDEKI----PLNAMLEEF----CASTKGDDT----PVVLGPRLDTYAFRRESLLAFDSYHLCSNGYKVLARNTADFLVPIMTGVEWKTWKKQL 279
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A329T1V1_9STRA (SGNH_hydro domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1V1_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.010e-30 Identity = 89/281 (31.67%), Postives = 135/281 (48.04%), Query Frame = 3
Query: 78 LLVALRRALTVTWIRINKFLMKPDWV--IRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAG-VTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVV---KMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
+L LR L + W I FL V + P + F HKVV+IGD FA G+GD++ +G G + L+K D+KVR W IIN G GS ++DWL S PK + S A D I ++ LG+ ++ R ++ D E ++L EICD LR +GK+V + V + + + +N L + K+T+T + V+ +++ RE ++D H NS+ YR A + + PMM AVEW WK++L
Sbjct: 1 MLATLRAFLALLWWYICHFLAYNLHVRGLNPASQFFHKVVIIGDDFAAGIGDYISVGSAGGGIAEYLKKIVAFDDKVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSRAMSDVSIVIIILGSAEI------------RNSSSDGHE------MKHHLMEICDTLRKKGKQVCLATVASPDPTASETDSASSTLNTALEQFCKSTST----------EEAPVILGPRLDTYAFRRESALSYDKYHFNSQSYRQLACNTADFLIPMMTAVEWTTWKAQL 253
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Match: A0A6A3RM93_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RM93_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.010e-30 Identity = 92/278 (33.09%), Postives = 133/278 (47.84%), Query Frame = 3
Query: 78 LLVALRRALTVTWIRINKFLMKPDWV--IRPVANFRHKVVLIGDGFAEGVGDWVVMGGTAG-VTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSAACRDAEIFVVALGTMDVVNECVGMPVSAMRKTALDTFEEGEICDTVNNLREICDALRAEGKKVVVCNVMTSGAGLNRRAGTAKRINRQLALYGKATATATRGSATKGGQPVEVVKMNNPRAAREDGRAFDGLHLNSRGYRAFASAVYEVVGPMMVAVEWKVWKSKL 902
+L ALR L + W I FL V ++P + F HKVV+IGD FA GVGD+V +G G + L+K D+KVR W IIN G GS ++DWL S PK ++ S A DA I ++ LG++++ N P +A + NL EICD LR +GK+V + V + + +N L + K+T +T+ + +++ RE D NS+ YR A + + PMM AVEW WK +L
Sbjct: 1 MLEALRVFLALVWWHICHFLAHNLHVRGLKPASQFFHKVVIIGDDFAAGVGDYVTVGSAGGGIAPYLKKIVSHDDKVRHNWAIINAGVPGSTTADWLLSSPKKYFNNVFTSRAMADASIVIIILGSVEIRN-----PAAAGHEMR-------------RNLVEICDTLRKKGKQVCLATVASPDPTATETDSASSTLNTALEHFCKST-------STEDAPVILGPRLDTYAFRRESALWIDKYRFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQL 253 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig784.19096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig784.19096.1 >prot_Ecto-sp13_S_contig784.19096.1 ID=prot_Ecto-sp13_S_contig784.19096.1|Name=mRNA_Ecto-sp13_S_contig784.19096.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=320bp MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVANFRHKVVback to top mRNA from alignment at Ecto-sp13_S_contig784:5283..9261- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig784.19096.1 ID=mRNA_Ecto-sp13_S_contig784.19096.1|Name=mRNA_Ecto-sp13_S_contig784.19096.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3979bp|location=Sequence derived from alignment at Ecto-sp13_S_contig784:5283..9261- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig784:5283..9261- >mRNA_Ecto-sp13_S_contig784.19096.1 ID=mRNA_Ecto-sp13_S_contig784.19096.1|Name=mRNA_Ecto-sp13_S_contig784.19096.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=960bp|location=Sequence derived from alignment at Ecto-sp13_S_contig784:5283..9261- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |