prot_Ecto-sp13_S_contig7814.19068.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7814.19068.1
Unique Nameprot_Ecto-sp13_S_contig7814.19068.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 2.220e-133
Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSGRPLLXXXXXXXGFPLPHKGKLTKQDPEFECPLCHFQAR 204
            MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSGRPLL XXXXX GFPLPHKGKLTKQDPEFECPLCHFQAR
Sbjct:  292 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSGRPLLFXXXXXTGFPLPHKGKLTKQDPEFECPLCHFQAR 495          
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: A0A835YM61_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM61_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.240e-52
Identity = 100/212 (47.17%), Postives = 128/212 (60.38%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSG---------RPLLXXXXXXXGFPLPHKGKLTKQDPEFECPLCHFQA 203
            + EGRT+ PPLLSESDLI LMD   IGTDATIAEHI+KIQ+R YA +  + RF PT LGLALVDGY+ +G ++S P LR A E DC  ++R E  +   + RC+S MK  F+ C + AH LD A+  HF  LG+     R       F+ CG CGT MDL+ + +G         RPLL       G PLPH+G++    P   CPLC ++ 
Sbjct:  308 LTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGA-----RAACVTAAFAACGNCGTRMDLRVTDAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALATPGVACPLCAYEV 514          
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: A0A7S0G8W9_9STRA (DNA topoisomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8W9_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.470e-48
Identity = 95/217 (43.78%), Postives = 133/217 (61.29%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSG---------RPLLXXXXXXXGFPLPHKGKLTK----QDPE-FECPLCHFQA 203
            M +GRT  P  +SE +LI LMD+ GIGTDATIA+HI  IQQR+YA ++ Q +F+PT LG+ALV+GY+++G+Q++ P LR   E +C  ++ G  +K+ ++   +SKM++CF    A AHKLD AVA HF+ LGS GG    +R  + FS+CG C   M LK+             R +L       G+P+P +G L      QD E F CP+C FQ 
Sbjct:  129 MKDGRTTPPLPISEVELISLMDRNGIGTDATIAQHIATIQQRQYATRDNQQKFHPTKLGIALVEGYNSMGYQLNKPDLRRETEAECNLVASGRKSKDQIIGPILSKMRDCFDRVNAEAHKLDLAVARHFQALGSDGGNFTVLR--QSFSKCGQCENLMTLKEMQDDNVQNRVRVKRKVLFCSTCAEGYPVP-RGDLAPYFNGQDREPFSCPICKFQV 342          
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: A0A4D9CZ97_9STRA (DNA topoisomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ97_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.990e-46
Identity = 99/225 (44.00%), Postives = 126/225 (56.00%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNE------------QDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGR------GFSRCGVCGTAMDLKKSSSGRPLLXXXXXXXGFPLPHKGKLTKQD----PEFECPLCHFQA 203
            ++ GRTQ PPLLSE+DLI  MD+KGIGTDATIA+HI+ I QRKY                 Q RF PT LGL LV+GY+ IG+Q++ P LRA ME +C R++RGE  +  +V+ C+ KMKECF+ CQ    +L +AV  + R  G  GG       G       GFS+CG C   MDL++  S    L          LPH  K T +     P   CPLC F+A
Sbjct:  508 LETGRTQPPPLLSEADLISRMDEKGIGTDATIAQHIKTILQRKYVTXXXXXXXXXXXXXXLQRRFQPTNLGLGLVEGYEEIGYQLTKPELRAEMERECKRVARGERGRTEMVQACLLKMKECFEDCQNQWERLPEAVGKYLRRYGQGGGREXXXXXGTIRTMQAGFSQCGHCQGRMDLRRDKSVL-FLACETCAASHLLPHSRKGTSRPSTLTPPVLCPLCGFEA 731          
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: A0A7S0D577_9EUKA (DNA topoisomerase (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D577_9EUKA)

HSP 1 Score: 166 bits (421), Expect = 1.160e-44
Identity = 95/203 (46.80%), Postives = 124/203 (61.08%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSGRPLLXXXXXXXGFPLPHKGKLTKQDPEFECPLCHFQA 203
            ++EG+T+ PPLLSE+DLI LM+Q GIGTDATIAEHI K++QRKY   N + +F P+ LG+ LV GY  +   M+ P LR  ME D   IS G+ TK+ V++ C+  MK+ + T       L   ++ HF PLG   G+S+T+R  R F+RCG CG  M L+KS   R +         F LP KG L   D  FECPLC FQ 
Sbjct:  208 LEEGKTEPPPLLSEADLISLMNQNGIGTDATIAEHIDKVKQRKYVFVNNR-QFIPSELGIGLVQGYKRMEIAMATPALRQQMERDINLISEGKKTKDEVLQECLEHMKDVYLTVMENHGLLSAEISEHFPPLGE--GDSKTLR--RSFTRCGNCGRTMSLRKSGEKRFVRCEACSQSHF-LP-KGSLHPYD--FECPLCKFQV 401          
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: B7G3B1_PHATC (DNA topoisomerase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3B1_PHATC)

HSP 1 Score: 168 bits (425), Expect = 1.430e-44
Identity = 92/219 (42.01%), Postives = 130/219 (59.36%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSG-----------RPLLXXXXXXXGFPLPH---KGKLTKQD--PEFECPLCHFQA 203
            M EGR+  P  +SE +LI LMD+ GIGTDATIA+HI  I  R+YA K+ + +F PT LG+ALV+GY+++G+Q++ P LR  ME +C  ++ G  TKE ++   ++KMK C++T +A A KLD+AVA HF  LG+    S+ V     FS CGVC  +M LK+               R LL       G+ LP    + K  ++D  P  +CP+C FQ 
Sbjct:  563 MKEGRSGPPQPISEVELISLMDRNGIGTDATIAQHISTILDREYARKDGRQKFLPTPLGIALVEGYNSMGYQLNKPDLRREMEAECNEVASGRKTKEEIMVPILAKMKSCYETARAEARKLDEAVARHFPRLGAGESTSQVVE--ESFSECGVCRNSMALKQERENNNRTTARNTVRRKLLYCSTCRAGWTLPRGVVRPKTEQEDNGPPVKCPICQFQV 779          
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: A0A6A5C7F2_NAEFO (DNA topoisomerase n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5C7F2_NAEFO)

HSP 1 Score: 165 bits (417), Expect = 1.650e-43
Identity = 94/203 (46.31%), Postives = 121/203 (59.61%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSGRPLLXXXXXXXGFPLPHKGKLTKQDPEFECPLCHFQA 203
            MDEG T+ PP LSESDLI  MD  GIGTDAT+A+HI+ IQ R Y +K   +RF  T LG+AL+ GYD IG+++S P LRA ME D   IS+G+ TK+AV+ + ++  K  F      AH LD AV  HF+P+G SG     VR    FS CG CG +MDLK+   G   L        + LP   K   +    +CP+C+FQ 
Sbjct:  488 MDEGETRPPPHLSESDLISAMDSNGIGTDATVAQHIKTIQDRGYVIKRG-NRFEATNLGIALLQGYDLIGYELSTPNLRAKMEKDMMCISQGQITKDAVINQSLAMYKHVFMQICKSAHLLDKAVQQHFKPIGESGQSKVLVRS---FSMCG-CGNSMDLKEQD-GHRFLFCKNCKEAYNLP--SKCEYESISDQCPICNFQV 682          
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: UPI001CFD67DF (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD67DF)

HSP 1 Score: 164 bits (416), Expect = 2.320e-43
Identity = 94/203 (46.31%), Postives = 121/203 (59.61%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSGRPLLXXXXXXXGFPLPHKGKLTKQDPEFECPLCHFQA 203
            MDEG T+ PP LSESDLI  MD  GIGTDAT+A+HI+ IQ R Y +K   +RF  + LG+AL+ GYD IG+++S P LRA ME D   IS+G+ TK+AV+ + ++  K  F      AH LD AV  HF+P+G SG     VR    FS CG CG +MDLK+   G   L        + LP   K   +    +CPLC+FQ 
Sbjct:  488 MDEGETRPPPHLSESDLISAMDSNGIGTDATVAQHIKTIQDRGYVIKRG-NRFEASNLGIALLQGYDLIGYELSTPNLRAKMEKDMVCISQGQITKDAVINQSLAMYKHVFMQICKSAHLLDKAVQQHFKPIGESGQSKVLVRS---FSMCG-CGNSMDLKEQD-GHRFLFCKNCKEAYNLP--SKCEYESISDQCPLCNFQV 682          
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: A0A7S2LVS8_9STRA (DNA topoisomerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVS8_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.210e-42
Identity = 88/222 (39.64%), Postives = 124/222 (55.86%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSG------------RPLLXXXXXXXGFPLPHKGKLTK-------QDPEFECPLCHFQA 203
            M+ G+T  P L+SE +LI LMD+ GIGTDATIA+HI  I  RKYA K+   RF+PT LG+ALV+GY+++G+Q++ P LR  ME +C  ++ G  T++ ++   +SKM ECF+   A  HKLD+AVA HF  LGS   + R ++    F+RCG C     LK+ + G              LL        F +P   +  +       Q     CP+C FQ 
Sbjct:  343 MNAGQTSPPQLISEVELIALMDRNGIGTDATIAQHITTIMDRKYAEKDGNQRFHPTKLGIALVEGYNSMGYQLNKPDLRREMESECNAVAAGRKTRDQILGPILSKMLECFKIVNAEVHKLDEAVARHFNNLGSDSSQYRVLQAN--FTRCGSCNGMTVLKQRTGGGSXXXXXXXXGGSKLLQCAPCSKSFLMPRYNREVRPGVNPNNQHEPLICPICQFQV 562          
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Match: D2VSX3_NAEGR (DNA topoisomerase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VSX3_NAEGR)

HSP 1 Score: 161 bits (407), Expect = 3.790e-42
Identity = 96/203 (47.29%), Postives = 127/203 (62.56%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECF-QTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSGRPLLXXXXXXXGFPLPHKGKLTKQDPEFECPLCHFQ 202
            MD G T+ PP LSESDLI  MD  GIGTDAT+A+HI+ IQ+R Y +K + +RF  T LG+AL+ GYD IG+++S P LR+ ME D   IS+GE +KEAV+ + +S  K  + Q C++ A+ LD AV  HF  LG   G+SR +  GRGFS C  C   MDLK+   G   L        +PLP K +   +  E  CP+C+FQ
Sbjct:  505 MDHGETRPPPHLSESDLISAMDSNGIGTDATVAQHIKTIQERGYVIK-KGNRFEATNLGMALLQGYDLIGYELSTPNLRSKMEKDMLSISKGEQSKEAVIHQSLSMYKHVYIQICKS-AYLLDKAVQQHFPTLGE--GQSRVL--GRGFSLCS-CKNPMDLKEQD-GNNFLHCKNCSDSYPLPSKSEY--ESIEDVCPICNFQ 697          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7814.19068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP7_ECTSI2.220e-13399.02DNA topoisomerase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835YM61_9STRA3.240e-5247.17DNA topoisomerase (Fragment) n=1 Tax=Tribonema min... [more]
A0A7S0G8W9_9STRA1.470e-4843.78DNA topoisomerase n=1 Tax=Proboscia inermis TaxID=... [more]
A0A4D9CZ97_9STRA4.990e-4644.00DNA topoisomerase n=1 Tax=Nannochloropsis salina C... [more]
A0A7S0D577_9EUKA1.160e-4446.80DNA topoisomerase (Fragment) n=1 Tax=Amorphochlora... [more]
B7G3B1_PHATC1.430e-4442.01DNA topoisomerase n=2 Tax=Phaeodactylum tricornutu... [more]
A0A6A5C7F2_NAEFO1.650e-4346.31DNA topoisomerase n=1 Tax=Naegleria fowleri TaxID=... [more]
UPI001CFD67DF2.320e-4346.31uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A7S2LVS8_9STRA2.210e-4239.64DNA topoisomerase n=1 Tax=Skeletonema marinoi TaxI... [more]
D2VSX3_NAEGR3.790e-4247.29DNA topoisomerase n=1 Tax=Naegleria gruberi TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 2..100
e-value: 2.3E-25
score: 89.5
IPR013824DNA topoisomerase, type IA, central region, subdomain 1GENE3D1.10.460.10coord: 2..131
e-value: 3.6E-45
score: 155.8
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 1..175
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 2..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7814contigEcto-sp13_S_contig7814:433..4462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7814.19068.1mRNA_Ecto-sp13_S_contig7814.19068.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7814 1..7259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7814.19068.1 ID=prot_Ecto-sp13_S_contig7814.19068.1|Name=mRNA_Ecto-sp13_S_contig7814.19068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQ
DRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVV
ERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSR
CGVCGTAMDLKKSSSGRPLLYCGVCDTGFPLPHKGKLTKQDPEFECPLCH
FQAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013497Topo_IA_cen
IPR013824Topo_IA_cen_sub1
IPR000380Topo_IA
IPR023405Topo_IA_core_domain