mRNA_Ecto-sp13_S_contig7792.19039.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: D7FJQ3_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ3_ECTSI) HSP 1 Score: 578 bits (1489), Expect = 1.240e-202 Identity = 289/303 (95.38%), Postives = 291/303 (96.04%), Query Frame = 1
Query: 1 MCTGECSRKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVFPVVETGAEGGAAGQQDVXXXXXXXXXXESFKADWLSDAESVGSDEVSKLYSEAGDLACSGETDDGDVGSTAAEGGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLKKR 909
MCTGECSRKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAEL+KARERIRGIQAELREVTRRLTEMNPGG+RWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ GEKFTSWKDVFPVVETGAEGGAAGQQDV ESFKADWLSDAESVGSDEVSKLYSEAGDLACSGETDDGDVGSTAAE GSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLKKR
Sbjct: 1 MCTGECSRKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELEKARERIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ-GEKFTSWKDVFPVVETGAEGGAAGQQDVLPTDSDEDDDESFKADWLSDAESVGSDEVSKLYSEAGDLACSGETDDGDVGSTAAEEGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLKKR 302
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A6H5KZT3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZT3_9PHAE) HSP 1 Score: 524 bits (1350), Expect = 2.590e-179 Identity = 280/350 (80.00%), Postives = 286/350 (81.71%), Query Frame = 1
Query: 25 KRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVFPVVETGAEGGAAGQQDVXXXXXXXXXX-------------------------------------------------------ESFKADWLSDAESVGSDEVSKLYSEAGDLACSGETDDGDVGSTAAEGGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLKKR 909
KRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAEL+KARE+IRGIQAELREVTRRLTEMNPGG+RWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ GEKFTSWKDVFPVVETGAEGGAAGQQDV XXXXX + +ADWLSDAESVGSDEVSKLYSEAGDLACS ETDDGDVGSTAAEGGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQL+KR
Sbjct: 144 KRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELEKAREKIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ-GEKFTSWKDVFPVVETGAEGGAAGQQDVLPTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNSEADWLSDAESVGSDEVSKLYSEAGDLACSAETDDGDVGSTAAEGGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLEKR 492
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7S2SRQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRQ9_9STRA) HSP 1 Score: 149 bits (375), Expect = 9.990e-39 Identity = 71/163 (43.56%), Postives = 105/163 (64.42%), Query Frame = 1
Query: 91 LLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPE-VFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVF 576
LL K+RR H+LQ Y+ +GW+S+ + K+KPT+EL KAR+ + + E+R + +++E NPG +W +Q D E I+V+E+ C+ C +S + +DIL+CD GCFRAYHQ CL P + E V +E DWFC QC+ L C ++ E G+ TSW +VF
Sbjct: 115 LLGKIRRLMHYLQTYEAEGWRSASQAKIKPTSELQKARDDVYAAKHEIRSILTQISEANPGNKKWSCMQGDAEEGIDVEEVGCSICLSLESTEDNDILMCDGEGCFRAYHQRCLQPAVTSEDVAGGDEVDWFCPQCDSLRHCLYLVSVEDVGGKPPTSWAEVF 277
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7S1J7G6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J7G6_9EUGL) HSP 1 Score: 124 bits (311), Expect = 5.640e-29 Identity = 65/183 (35.52%), Postives = 102/183 (55.74%), Query Frame = 1
Query: 52 ENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKF--TSWKDVFPVVETG 594
E+ W+ + + + + +RR+ H L Y +G +S+ REKLKP E+ KA++RI + +R++ +L MN W +GE + ++ C+ CG + D +DIL CD GC RAYHQ CL P + E EEEE W+C QC C+ +C+E + +F+ ++ T W V P+ E G
Sbjct: 34 ESVWNGVLRQVRRQVAIVRREQHLLDTYSHEGTRSANREKLKPVQEMQKAQDRIARARQSIRDILAQLAGMNAEHACWLV---EGE-RMHPKDVSCSACGGAECDSENDILCCDAEGCCRAYHQLCLKPHVTTEEHAEEEE-WWCHQCNCMQECYEEINEQFETQYEYPQTPWDQVLPLEEEG 211
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: L1JX63_GUITC (PHD-type domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JX63_GUITC) HSP 1 Score: 120 bits (302), Expect = 5.340e-28 Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 1
Query: 67 RIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRL----TEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVFPVVETGA 597
RIR + K L R L Y+QDGW S KLKPT EL K+ E + + E++E+ +++ E+ R + + EG + ++I+C+ CG GD+ +DILLCDY+ C RA+HQ C P + P ++EDWFC C C TDC E + F G +T+W+ +FP +E A
Sbjct: 134 RIRNRIKTRLTNARYFQTMLDAYEQDGWGPSSHRKLKPTEELKKSSESLIHAKKEIKELLKQMDPASNELAQKETRIDEREYEAEG-LAFEKIVCSICGTGDARRGNDILLCDYSECNRAFHQKCHHPQVTE--LPHDDEDWFCTHCLCYTDCIEAVNELF--GTHYTTWEKMFPELEENA 309
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: C1EG75_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1EG75_MICCC) HSP 1 Score: 122 bits (305), Expect = 1.050e-27 Identity = 60/164 (36.59%), Postives = 99/164 (60.37%), Query Frame = 1
Query: 94 LHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEF--QQGEKFTSWKDVFP 579
L +RR+ H + Y+ DGWK + REKL+P E+ K++ +I + ++R++ R + +M+ G V + E+ G ++V++++C +C GD+ D +DIL+CD C RA+HQ C+ PP+K + P+E W C C+ DCF L +F + SW+DVFP
Sbjct: 81 LSTIRREQHHIDAYEMDGWKGASREKLRPADEIRKSQVKIFNCKLKVRDMFRDI-DMDTGEVSFRDRIEEDTGEVDVEDVVCARCADGDATDENDILICD-GYCDRAFHQRCVVPPVKADEIPDE---WLCPLCDARVDCFYTLNADFDLELDAADASWRDVFP 239
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7S4NP67_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NP67_GUITH) HSP 1 Score: 120 bits (302), Expect = 2.590e-27 Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 1
Query: 67 RIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRL----TEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVFPVVETGA 597
RIR + K L R L Y+QDGW S KLKPT EL K+ E + + E++E+ +++ E+ R + + EG + ++I+C+ CG GD+ +DILLCDY+ C RA+HQ C P + P ++EDWFC C C TDC E + F G +T+W+ +FP +E A
Sbjct: 134 RIRNRIKTRLTNARYFQTMLDAYEQDGWGPSSHRKLKPTEELKKSSESLIHAKKEIKELLKQMDPASNELAQKETRIDEREYEAEG-LAFEKIVCSICGTGDARRGNDILLCDYSECNRAFHQKCHHPQVTE--LPHDDEDWFCTHCLCYTDCIEAVNELF--GTHYTTWEKMFPELEENA 309
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7S1G4N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4N2_9STRA) HSP 1 Score: 113 bits (282), Expect = 5.730e-26 Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 1
Query: 58 RWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQED-------GEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEED-WFCWQCECLTDCFE 519
++ + R + L K+R + Y +GW+ + RE +KP +E+ KAR+ +R + LR + L N G A+ D G + ++++ C++CGQ D+DD +DILLCD+AGC RAYHQ C+ PP E P+EE D WFC +C C C E
Sbjct: 19 KFQQYRKRVAATLSKVRYLKTLMDAYASNGWQDAKRESVKPKSEISKARQSLRAAKRLLRTILTAL--WNEDGADRAAVTTDLLRADAAGRELVLMEDMPCSRCGQVDADDDNDILLCDHAGCNRAYHQLCMDPPFPTECIPQEELDPWFCNRCRCFLMCLE 178
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7R9THL8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9THL8_MICPS) HSP 1 Score: 113 bits (283), Expect = 1.780e-25 Identity = 65/191 (34.03%), Postives = 102/191 (53.40%), Query Frame = 1
Query: 19 SRKRSRNAS-DGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ---QGEKFTSWKDVFP 579
+RK + A+ D + + R R K L +R+ + Y DGW+ + REKL+P E+ KA+ +I + +RE+ + + G AI ++ +G ++ +++ C CG G+S D +DILLCD C R +HQ C PP++ E PE +E W C C+ DCF L +F+ K T + DVFP
Sbjct: 78 ARKNGKRANVDDVSEYKRTRGKIHSQLSAIRQLNAMIDAYDMDGWRGASREKLRPAEEIRKAKIKIFNAKLRVRELFKHIDLAMDGARDLHAITDE-DGELDAEDVFCCACGDGESTDDNDILLCD-GFCDRGFHQRCCVPPVRTEDIPEGDEGWLCALCDARVDCFYTLNADFELELDAGKAT-FADVFP 265
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: UPI000C1CE8F2 (pathogenesis-related homeodomain protein-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE8F2) HSP 1 Score: 115 bits (288), Expect = 5.310e-25 Identity = 66/189 (34.92%), Postives = 101/189 (53.44%), Query Frame = 1
Query: 22 RKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFT---SWKDVFP 579
RKR N + R R + L+H++R + + + Y +GWK EKLKP EL +A+ I + +RE+ + L +++ + A D G I+ ++I C+KCG D +DI+LCD A C R +HQ CL PP+ + P ++E W C C+C DC L N+FQ G + SW+ +FP
Sbjct: 303 RKRKEMNKGPVNEFSRTRTHLRYLMHRIRYEQNLIDAYSAEGWKRQSLEKLKPEKELQRAKSHILDYKLRIRELFQGL-DLSLAVGKLPASLFDSAGEIDSEDIFCSKCGSKDITTGNDIILCDGA-CERGFHQFCLEPPLLKQDIPPDDESWLCPGCDCKVDCIGYL-NDFQ-GTNLSVIDSWEKIFP 487 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7792.19039.1 >prot_Ecto-sp13_S_contig7792.19039.1 ID=prot_Ecto-sp13_S_contig7792.19039.1|Name=mRNA_Ecto-sp13_S_contig7792.19039.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp MCTGECSRKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWback to top mRNA from alignment at Ecto-sp13_S_contig7792:2638..6982+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7792.19039.1 ID=mRNA_Ecto-sp13_S_contig7792.19039.1|Name=mRNA_Ecto-sp13_S_contig7792.19039.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4345bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7792:2638..6982+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7792:2638..6982+ >mRNA_Ecto-sp13_S_contig7792.19039.1 ID=mRNA_Ecto-sp13_S_contig7792.19039.1|Name=mRNA_Ecto-sp13_S_contig7792.19039.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7792:2638..6982+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |