mRNA_Ecto-sp13_S_contig7787.19035.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: D7G484_ECTSI (Lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G484_ECTSI) HSP 1 Score: 442 bits (1138), Expect = 8.910e-153 Identity = 222/237 (93.67%), Postives = 225/237 (94.94%), Query Frame = 1
Query: 25 SDFDHYVQDLVRFSKVILPATVRPRDASGGTRTGGQGTAGSGDPPVVAGEPLGSDETLHALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGVVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSVPVLVLEAGLDHLVRPDGIARFRRKVPGAGYRLFHGAYHDLFDETDDIR 735
+DFDHYVQDL RFSKVILPATVRPRDASGGTRTGGQGTAGSGD PVV GEPLG D ALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAP TGKLPNGVVGAL WVVTKLGRQGHRSPIRRPARA+MEWSRVTHDKERLRLWETLRG VGCVLQRGPSFAWLSKSV+ASKRARGRLHQLSVPVLVLEAGLDHLVR DGIARFRRKVPGAGYRLFHGAYHDLFDETDDIR
Sbjct: 153 TDFDHYVQDLERFSKVILPATVRPRDASGGTRTGGQGTAGSGDSPVVNGEPLGCDAPFPALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPNTGKLPNGVVGALTWVVTKLGRQGHRSPIRRPARATMEWSRVTHDKERLRLWETLRGTVGCVLQRGPSFAWLSKSVLASKRARGRLHQLSVPVLVLEAGLDHLVRSDGIARFRRKVPGAGYRLFHGAYHDLFDETDDIR 389
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: A0A6H5KMI3_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI3_9PHAE) HSP 1 Score: 344 bits (883), Expect = 4.200e-117 Identity = 178/191 (93.19%), Postives = 179/191 (93.72%), Query Frame = 1
Query: 19 MFSDFDHYVQDLVRFSKVILPATVRPRDASGGTRTGGQGTAGSGDPPVVAGEPLGSDETLHALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGVVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSV 591
MFSDFDHYVQDLVRFSKVILPATVRPRDASGGT T SGDPPVV GE LGSD TL ALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRG+VGCVLQRGPSFAWLSKSVVASKRARGRLHQLSV
Sbjct: 1 MFSDFDHYVQDLVRFSKVILPATVRPRDASGGTGTXXXXXXXSGDPPVVNGELLGSDGTLPALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGIVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSV 191
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: A0A838L938_9SPHN (Alpha/beta hydrolase n=1 Tax=Sphingomonas chungangi TaxID=2683589 RepID=A0A838L938_9SPHN) HSP 1 Score: 102 bits (254), Expect = 1.360e-21 Identity = 65/186 (34.95%), Postives = 93/186 (50.00%), Query Frame = 1
Query: 217 VVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGVVGCVLQRGPSFAWLSKSVVASKR--ARGRLHQLSVPVLVLEAGLDHLVRPDGIARFRRKVPGAGYRLFHGAYHDLFDETDDIRLKVLQETCSFL 768
+VAHSMGG +A+ A D LVL APMLA TG +P V A+ KL R GHR+ R + R+T K R + + + + P++ W+ ++ +R +G L + PVL+L AGLD LVR + IA +++P A +LF H+L E D+ RL L FL
Sbjct: 125 LVAHSMGGHVALRACAERGLTVDALVLVAPMLALNTGYIPRIVASAVVGSA-KLARLGHRAIFRDNYSNPRRYLRLTASKPRYEDSQYWKRAIPGIAMGPPTWNWIGAALAGDRRIAGKGELEGVRTPVLLLAAGLDKLVRDEAIAAAAKRLPDAELKLFPTGRHELLREADENRLPALAAIDDFL 309
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: A0A318AXB5_9NOSO (Alpha/beta hydrolase n=1 Tax=Nostoc sp. 3335mG TaxID=2204170 RepID=A0A318AXB5_9NOSO) HSP 1 Score: 101 bits (252), Expect = 2.600e-21 Identity = 65/186 (34.95%), Postives = 93/186 (50.00%), Query Frame = 1
Query: 217 VVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGVVGCVLQRGPSFAWLSKSVVASKR--ARGRLHQLSVPVLVLEAGLDHLVRPDGIARFRRKVPGAGYRLFHGAYHDLFDETDDIRLKVLQETCSFL 768
+VAHSMGG +A+ A FD LVL APMLA TG +P V A+ KL R GHR+ R + R+T R + + + + P++ W+ ++ +R +G L + PVL+L AGLD LVR D I+ +++P A +LF H+L E D+ RL L FL
Sbjct: 126 LVAHSMGGHVALRACAERGLTFDALVLVAPMLALNTGYIPRIVASAVVEGA-KLARLGHRAIFRDNYSNPRRYLRLTASLPRYEDSQYWKQAIPGIAMGPPTWNWIGAALAGDRRIAGKGELEGVRTPVLLLAAGLDKLVRDDAISAAAQRLPDAEMKLFPTGRHELLREADENRLPALAAIDDFL 310
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: A0A4Q8UKR6_9ALTE (Alpha/beta fold hydrolase n=1 Tax=Alteromonas sp. KUL49 TaxID=2480798 RepID=A0A4Q8UKR6_9ALTE) HSP 1 Score: 94.4 bits (233), Expect = 1.300e-18 Identity = 63/189 (33.33%), Postives = 93/189 (49.21%), Query Frame = 1
Query: 217 VVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWV---VTKLGRQGHRSPIRRPARASMEWS--RVTHDKERLRLWETLRGVVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSVPVLVLEAGLDHLVRPDGIARFRRKVPGAGYRLFHGAYHDLFDETDDIRLKVLQETCSFL 768
+V HSMGG I LREPELF VLAAPM LP+ + +L V V +L R+ + S+ ++ ++TH + R RL+ L + G + WLS + A R R ++S+P+LVL A DH++ +P A + AYH+LF E D++R+K L + FL
Sbjct: 132 LVCHSMGGAIGTLTLLREPELFSKAVLAAPMYGIKPA-LPDWLASSLLQVGLGVNRLRRRDSGYFFGQTGYVSLPFTLNKLTHSQSRYRLFRALYDEEKALQLGGVTTEWLSAAKTAMDLIRQRAQEISLPMLVLSADRDHIIDNKRQREVVATIPNASLEIIPDAYHELFIERDELRIKSLTKVLDFL 319
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: A0A2E6H695_9PROT (Hydrolase_4 domain-containing protein n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2E6H695_9PROT) HSP 1 Score: 94.0 bits (232), Expect = 1.710e-18 Identity = 58/185 (31.35%), Postives = 89/185 (48.11%), Query Frame = 1
Query: 217 VVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGR-QGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGVVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSVPVLVLEAGLDHLVRPDGIARFRRKVPGAGYRLFHGAYHDLFDETDDIRLKVLQETCSFL 768
++AHSMG ++ + A R P+ +DGL+L +PML T P+ VV L V+ ++G G + E + VTH R RL + C+ PS W+ + S++A H L +P+L+ +AG D V + F + F AYH++F E D IR K ++E FL
Sbjct: 133 MLAHSMGSIVGLLHAQRNPKFWDGLILGSPMLEIKTRSFPSWVVSNLFKVMKRVGMADGFVPGGTEDEQEPFENNSVTHCPHRFRLARYIEEREPCLFVADPSPNWVLEGFKGSQQALEGRHVLKMPILMFQAGKDEYVHEEAQNEFASTMVNCKKVRFRNAYHEIFQEKDSIRDKAIKEIIRFL 317
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: A0A6H5JGE2_9PHAE (Hydrolase_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGE2_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 4.190e-17 Identity = 64/192 (33.33%), Postives = 98/192 (51.04%), Query Frame = 1
Query: 211 LSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWS-RVTHDKERLRLWETLRGVVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSVPVLVLEAGLDHLV---RPDGIARFRRKVPGAGYRLFHGAYHDLFDETDDIRLKVLQETCSFLNS 774
L+ +AHSMGGL+++ AA + LF LV+ +PM+ G +P+ V L + +LG +P++ S + ++T DK RL WE +R V G S W+ +++ A R R Q+SVPVL+LEAG+D V RP R VP + YH++ E + R ++ T +FL S
Sbjct: 127 LTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCG-MPHFVALWLGRLFCRLGMGSSYAPVQSGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQNWFRARAKQVSVPVLLLEAGVDVFVCTSRP--FRELCRAVPSCRRLCYPTTYHEILFEKEWARSHAMKATITFLKS 315
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: U3A3V3_9HYPH (Putative lipase n=1 Tax=Caenibius tardaugens NBRC 16725 TaxID=1219035 RepID=U3A3V3_9HYPH) HSP 1 Score: 88.6 bits (218), Expect = 1.710e-16 Identity = 69/203 (33.99%), Postives = 98/203 (48.28%), Query Frame = 1
Query: 217 VVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSR------------VTHDKERL--RLWETLRGVVGCVLQRGP-SFAWLSKSVVASKRARGR---LHQLSVPVLVLEAGLDHLVRPDGIARFRRKVPGAGYRLFHG-AYHDLFDETDDIRLKVLQETCSFL 768
++AHSMGG +A+ A D LVL+APML + +P V+ +AW +T+LG P R + WS +THD +R LW L GP S+ W+ ++ AS RA R L Q+++PVL+L D LV P IAR R++P LF A H++ ETD +R + L+ FL
Sbjct: 129 LIAHSMGGHLALRAVAEHRVAPDALVLSAPMLGISASLIPVPVLHGVAWAMTRLGD---------PRRPAWRWSEKPGELPADRADLLTHDPDRYADELWWRAHRPE---LVMGPGSWGWVERAF-ASTRALARPGVLEQVTIPVLILATAKDRLVDPRAIARAVRRLPDCEELLFGPEARHEILRETDSVRDRALRAIDGFL 318
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: A0A1M5XT26_9DELT (Lysophospholipase n=1 Tax=Desulfofustis glycolicus DSM 9705 TaxID=1121409 RepID=A0A1M5XT26_9DELT) HSP 1 Score: 87.0 bits (214), Expect = 6.400e-16 Identity = 65/190 (34.21%), Postives = 100/190 (52.63%), Query Frame = 1
Query: 217 VVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVG-ALAWVVTKLGRQGHRSPIRRPARASMEWSR--VTHDKERLRLWETLRGVVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSVPVLVLEAGLDH-LVRPDGIARFRRKVPGAGYRLFHGAYHDLFDETDDIRLKVLQETCSFLNS 774
V+AHSMGG IA+ A P L DGL+L +PML TG L ++G ALA ++ + G G RA + ++ +T D ER + + + P+F WL ++ +RAR +L+ PVL+L AGLD +VR + F R++P + F GA H++ E D++R + E F++S
Sbjct: 122 VLAHSMGGAIAMLALAERPGLADGLILVSPMLQINTGCLLPPLLGEALAALICRFGGGGSYVWGGGSFRADLPFAGNDLTGDAERFARNQQMIVDRSELALGSPTFGWLRQAYRGMRRARSSHDKLNCPVLLL-AGLDDTVVRVPAMLSFSRRLPRCTVKRFAGARHEVLMEHDEVRGTAIAEILGFIDS 310
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Match: UPI001FCFF457 (alpha/beta fold hydrolase n=1 Tax=Acuticoccus sp. I52.16.1 TaxID=2928472 RepID=UPI001FCFF457) HSP 1 Score: 88.2 bits (217), Expect = 1.060e-15 Identity = 56/185 (30.27%), Postives = 89/185 (48.11%), Query Frame = 1
Query: 217 VVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGVVGCVLQRGPSFAWLSKSVVASKRARGRLH-QLSVPVLVLEAGLDHLVRPDGIARFRRKVPGAGYRLFHGAYHDLFDETDDIRLKVLQETCSFL 768
VVAHSMGGL+A+ AA R + + +VL AP+L + LP G++G + G R E +R+T D +R + + L + GP+ W+ ++ A +R + ++ L +P L + +G D +V I RF R PG G L GA H + E D++R +F+
Sbjct: 116 VVAHSMGGLVALTAAPRLADEVERMVLLAPVLQISQLPLPAGLIGLIGGAAALFGLDRMRVRRSPEGPTPFEENRITSDPQRYQQLQRLADANPDLAIAGPTLGWVRATIAAGRRVQRQVGLPLPIPSLFVASGRDEIVSTPVIDRFARSAPGGGAVLIPGARHQVLLERDELRDLAFAAMDAFI 300 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7787.19035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7787.19035.1 >prot_Ecto-sp13_S_contig7787.19035.1 ID=prot_Ecto-sp13_S_contig7787.19035.1|Name=mRNA_Ecto-sp13_S_contig7787.19035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=265bp MFSDFDHYVQDLVRFSKVILPATVRPRDASGGTRTGGQGTAGSGDPPVVAback to top mRNA from alignment at Ecto-sp13_S_contig7787:2767..6685- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7787.19035.1 ID=mRNA_Ecto-sp13_S_contig7787.19035.1|Name=mRNA_Ecto-sp13_S_contig7787.19035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3919bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7787:2767..6685- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7787:2767..6685- >mRNA_Ecto-sp13_S_contig7787.19035.1 ID=mRNA_Ecto-sp13_S_contig7787.19035.1|Name=mRNA_Ecto-sp13_S_contig7787.19035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=795bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7787:2767..6685- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |