mRNA_Ecto-sp13_S_contig7762.19005.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: D7G4C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C8_ECTSI) HSP 1 Score: 340 bits (873), Expect = 2.900e-112 Identity = 169/176 (96.02%), Postives = 174/176 (98.86%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRELVL 528
PMLVALSVTIPDCGKPRWEQWY +SFLMSLAWIG+LTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDR+GIALNVIILFCTA+LFVSVLA NDWSMNTKMG+FLFCLYVAYVIFVVIRELVL
Sbjct: 429 PMLVALSVTIPDCGKPRWEQWYAMSFLMSLAWIGLLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRDGIALNVIILFCTAILFVSVLAGNDWSMNTKMGIFLFCLYVAYVIFVVIRELVL 604
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S2G6T6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6T6_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.110e-50 Identity = 91/176 (51.70%), Postives = 124/176 (70.45%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKPRW----EQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIR 516
P L+ ++T+PDC P + +Q Y VSFL + WIG+L H+MVEW + L+V PI + LVVLA GTS+PDA+GSM+AA++GEANMAI+NAVGSNVFD+L+GLG PW L G+ KGE M V R+GI V ILF T LF+ +L W MN+ +G +F LY A+V++ +++
Sbjct: 361 PFLIGFALTVPDCDHPTFTNCFKQIYWVSFLNCILWIGILCHFMVEWAHECAIILDVDPIVVALVVLATGTSIPDAIGSMVAAKNGEANMAISNAVGSNVFDILLGLGLPWVLSGLTKGEAMIVRRDGIIEYVGILFGTVFLFLLILIVFRWKMNSTVGGMMFFLYCAFVVYCLLK 536
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: D8LLM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM0_ECTSI) HSP 1 Score: 177 bits (450), Expect = 7.760e-50 Identity = 87/195 (44.62%), Postives = 125/195 (64.10%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEAN----------------------MAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 519
P LV LS+T+PDC +P +E++Y+++F+MS++WI +++ YMV G C L VS I MG++VLA+GTSVPD +GSMIAA++GEA+ MAIANA+GSNVF++L+GLG PW ++ GEP VD G +IILFC ++FV L + W+MNTK+ L Y +YV++ + E
Sbjct: 358 PFLVGLSLTVPDCSRPEYEKYYILTFVMSISWISIISSYMVTLATGAACILGVSAIVMGVLVLAVGTSVPDMIGSMIAAKNGEASVGALPLLPTHEPTHPHIHGRGDMAIANAIGSNVFNILLGLGGPWLFSSLVSGEPTAVDSEGATTALIILFCAVLMFVVSLILSRWNMNTKLAYSLLFTYASYVVYTITAE 552
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S2H048_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H048_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.200e-46 Identity = 79/169 (46.75%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRN-GIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIF 504
P +VA ++TIPDC K E++YV +F++S+ WI +L +MV+ +GC L++SP+ MG+VVL++GTS+PDA+GS+ A+ GEA+MAI+NAVGSNVFD+L+GLG PW L I G+ + + +A+ + ILF T + F VL N W MN ++GV Y Y+ F
Sbjct: 288 PAVVAFTLTIPDCSKTVCEKYYVPTFILSIIWIMILCMFMVQCAAAVGCLLDISPVIMGIVVLSVGTSIPDALGSVAVAKKGEADMAISNAVGSNVFDILLGLGVPWTLYTIFSGKSVTMSHQCSVAVPIAILFGTLIFFFGVLVANKWKMNNRLGVIFLAFYFVYLTF 456
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S0J6V7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J6V7_9EUKA) HSP 1 Score: 160 bits (406), Expect = 1.130e-45 Identity = 73/173 (42.20%), Postives = 117/173 (67.63%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 519
P+ + ++IP+C +PR + Y+++F MS+ WIGVL+++M W + LGC + P MG+ VLA GTSVPDA+GS++ AR G+ +MA++NA+GSNVFD+L+GLG PW L +IKGE +PVD +G+ ++L T V + + + + + +GVF F LY +V + ++ +
Sbjct: 119 PLFLLFELSIPNCSEPRNKHRYLITFTMSILWIGVLSYFMTTWASKLGCLWGIHPAVMGVTVLAAGTSVPDAIGSLLVARDGQGDMAVSNAIGSNVFDILLGLGLPWALANLIKGEEVPVDTDGLLPLSVLLMLTLVAVYAGIFLSGFVLTKSIGVFFFVLYFLFVAYSLLHD 291
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S1GDC6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDC6_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.280e-45 Identity = 78/176 (44.32%), Postives = 118/176 (67.05%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGII--KGEPMPVDRNGIALNVIILFCTA-VLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 519
P + TIPDC + +WE+WY ++F MS+ WIG L++++V+ LGCF + PI MGL VLA GTS+PDA+GSM+ A+ G NMA++NA+GSNVFD+ +G+G P+F+ I G + V + + ++IL T V+FVS LA + W ++ K+G LF YVA+V++ + +E
Sbjct: 31 PWMFVFGYTIPDCNEEKWEKWYALAFTMSILWIGALSYFLVDMAVRLGCFFGLGPIVMGLTVLAAGTSIPDALGSMVVAQEGMGNMAVSNAIGSNVFDICLGIGLPYFVATAIVWPGTAIKVADSEVLEPILILLSTVLVVFVS-LAASKWLLSNKVGYLLFFCYVAFVVYNIAKE 205
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A2R5G219_9STRA (Sodium/potassium/calcium exchanger 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G219_9STRA) HSP 1 Score: 165 bits (417), Expect = 4.440e-45 Identity = 76/175 (43.43%), Postives = 116/175 (66.29%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKP--RWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 519
P++ L TIPDC R+ +W++ +F+MS+ WIG V + +GC L ++ I MGL++LA GTSVPD + SMI A+ G A+MAIANAVGSNVFD+L+GLG PW +I+G P+ VDR + +++++L T +L++S L N W+M ++GV +Y Y+I+ ++ E
Sbjct: 372 PLVALLHSTIPDCSNEDGRFHRWFISTFVMSIVWIGAACQLAVILASEIGCILGINAIIMGLILLAAGTSVPDMIASMIVAKQGHADMAIANAVGSNVFDILLGLGLPWAFAEVIRGNPVIVDRGNLKIDIVVLVITVILYISTLILNRWTMEKRIGVVFVFIYFGYIIYAILVE 546
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S0LBD8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LBD8_9EUKA) HSP 1 Score: 154 bits (389), Expect = 8.960e-44 Identity = 71/173 (41.04%), Postives = 115/173 (66.47%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 519
P+ + ++IP+C +PR + Y+V+F MS+ WIGVL+++M W + LGC + P MG+ VLA GTSVPDA+GS++ AR G+ +MA++NA+GSNVFD+L+GLG PW L + KG+ + VD +G+ ++L T +L + + + + +GVF F LY +V + ++ +
Sbjct: 63 PLFLLFEISIPNCAEPRNKNRYLVTFFMSIFWIGVLSYFMTTWASKLGCLWGIHPAVMGVTVLAAGTSVPDAIGSLLVARDGQGDMAVSNAIGSNVFDILLGLGLPWALANMFKGKMVHVDIDGLLPLSVLLLVTLLLVYTATFLSGFVLTRGIGVFFFILYFVFVAYSLLHD 235
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S0WLA0_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WLA0_9CHLO) HSP 1 Score: 158 bits (399), Expect = 1.670e-42 Identity = 73/176 (41.48%), Postives = 115/176 (65.34%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRELVL 528
P A +TIPDC E WY+ +F MS+ WIG+L ++MV N +GC + P+ M ++VLA GTS+PD GS+ AR G+ +MA++NA+GSNVFD+L+GLG PWF+ + +GE + V++ + +N+ LF V +++ + WN++ + +MG L LY +VIF V+ L++
Sbjct: 349 PYYWAFWLTIPDCRLEHRETWYLATFTMSVLWIGILVYFMVWATNIIGCVINFPPVPMSVLVLAAGTSIPDMFGSLAVAREGQGDMAVSNAIGSNVFDILLGLGLPWFIMILWRGEDISVEKGDLFMNIGFLFAVLVAYMTGVIWNNYKLTARMGTALCILYACFVIFTVVYYLLI 524
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S3RHS5_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RHS5_9SPIT) HSP 1 Score: 152 bits (385), Expect = 6.130e-42 Identity = 73/173 (42.20%), Postives = 106/173 (61.27%), Query Frame = 1
Query: 1 PMLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 519
P+ + TIP+C R + ++ +F MS+ WIG+L+++MV W + LGC + P MG+ VLA GTSVPDA+GS++ AR G +MA++NA+GSNVFD+L+GLG PW I G +PVD GI IIL T + + + +G F F LY A+V + ++RE
Sbjct: 172 PLFLMFEATIPNCSLERNKGRHLTTFFMSVLWIGILSYFMVTWASKLGCIWGIHPAVMGITVLAAGTSVPDAIGSLLVARDGHGDMAVSNAIGSNVFDILLGLGLPWLFSNAIFGVSVPVDATGIVPFTIILLSTLAMIYGATFLGGFRLTKPLGAFFFTLYFAFVAWALLRE 344 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7762.19005.1 >prot_Ecto-sp13_S_contig7762.19005.1 ID=prot_Ecto-sp13_S_contig7762.19005.1|Name=mRNA_Ecto-sp13_S_contig7762.19005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp MLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLback to top mRNA from alignment at Ecto-sp13_S_contig7762:826..1356+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7762.19005.1 ID=mRNA_Ecto-sp13_S_contig7762.19005.1|Name=mRNA_Ecto-sp13_S_contig7762.19005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=531bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7762:826..1356+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7762:826..1356+ >mRNA_Ecto-sp13_S_contig7762.19005.1 ID=mRNA_Ecto-sp13_S_contig7762.19005.1|Name=mRNA_Ecto-sp13_S_contig7762.19005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=528bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7762:826..1356+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |