prot_Ecto-sp13_S_contig7762.19005.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7762.19005.1
Unique Nameprot_Ecto-sp13_S_contig7762.19005.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length176
Homology
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: D7G4C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C8_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 3.150e-111
Identity = 168/175 (96.00%), Postives = 173/175 (98.86%), Query Frame = 0
Query:    1 MLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRELVL 175
            MLVALSVTIPDCGKPRWEQWY +SFLMSLAWIG+LTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDR+GIALNVIILFCTA+LFVSVLA NDWSMNTKMG+FLFCLYVAYVIFVVIRELVL
Sbjct:  430 MLVALSVTIPDCGKPRWEQWYAMSFLMSLAWIGLLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRDGIALNVIILFCTAILFVSVLAGNDWSMNTKMGIFLFCLYVAYVIFVVIRELVL 604          
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S2G6T6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6T6_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.130e-49
Identity = 90/174 (51.72%), Postives = 123/174 (70.69%), Query Frame = 0
Query:    2 LVALSVTIPDCGKPRW----EQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIR 171
            L+  ++T+PDC  P +    +Q Y VSFL  + WIG+L H+MVEW +     L+V PI + LVVLA GTS+PDA+GSM+AA++GEANMAI+NAVGSNVFD+L+GLG PW L G+ KGE M V R+GI   V ILF T  LF+ +L    W MN+ +G  +F LY A+V++ +++
Sbjct:  363 LIGFALTVPDCDHPTFTNCFKQIYWVSFLNCILWIGILCHFMVEWAHECAIILDVDPIVVALVVLATGTSIPDAIGSMVAAKNGEANMAISNAVGSNVFDILLGLGLPWVLSGLTKGEAMIVRRDGIIEYVGILFGTVFLFLLILIVFRWKMNSTVGGMMFFLYCAFVVYCLLK 536          
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: D8LLM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM0_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 7.810e-49
Identity = 86/193 (44.56%), Postives = 124/193 (64.25%), Query Frame = 0
Query:    2 LVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEAN----------------------MAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 172
            LV LS+T+PDC +P +E++Y+++F+MS++WI +++ YMV    G  C L VS I MG++VLA+GTSVPD +GSMIAA++GEA+                      MAIANA+GSNVF++L+GLG PW    ++ GEP  VD  G    +IILFC  ++FV  L  + W+MNTK+   L   Y +YV++ +  E
Sbjct:  360 LVGLSLTVPDCSRPEYEKYYILTFVMSISWISIISSYMVTLATGAACILGVSAIVMGVLVLAVGTSVPDMIGSMIAAKNGEASVGALPLLPTHEPTHPHIHGRGDMAIANAIGSNVFNILLGLGGPWLFSSLVSGEPTAVDSEGATTALIILFCAVLMFVVSLILSRWNMNTKLAYSLLFTYASYVVYTITAE 552          
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S2H048_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H048_9STRA)

HSP 1 Score: 165 bits (418), Expect = 8.770e-46
Identity = 78/167 (46.71%), Postives = 115/167 (68.86%), Query Frame = 0
Query:    2 LVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRN-GIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIF 167
            +VA ++TIPDC K   E++YV +F++S+ WI +L  +MV+    +GC L++SP+ MG+VVL++GTS+PDA+GS+  A+ GEA+MAI+NAVGSNVFD+L+GLG PW L  I  G+ + +     +A+ + ILF T + F  VL  N W MN ++GV     Y  Y+ F
Sbjct:  290 VVAFTLTIPDCSKTVCEKYYVPTFILSIIWIMILCMFMVQCAAAVGCLLDISPVIMGIVVLSVGTSIPDALGSVAVAKKGEADMAISNAVGSNVFDILLGLGVPWTLYTIFSGKSVTMSHQCSVAVPIAILFGTLIFFFGVLVANKWKMNNRLGVIFLAFYFVYLTF 456          
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S1GDC6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDC6_9STRA)

HSP 1 Score: 155 bits (393), Expect = 9.970e-45
Identity = 77/174 (44.25%), Postives = 117/174 (67.24%), Query Frame = 0
Query:    2 LVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGII--KGEPMPVDRNGIALNVIILFCTA-VLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 172
            +     TIPDC + +WE+WY ++F MS+ WIG L++++V+    LGCF  + PI MGL VLA GTS+PDA+GSM+ A+ G  NMA++NA+GSNVFD+ +G+G P+F+   I   G  + V  + +   ++IL  T  V+FVS LA + W ++ K+G  LF  YVA+V++ + +E
Sbjct:   33 MFVFGYTIPDCNEEKWEKWYALAFTMSILWIGALSYFLVDMAVRLGCFFGLGPIVMGLTVLAAGTSIPDALGSMVVAQEGMGNMAVSNAIGSNVFDICLGIGLPYFVATAIVWPGTAIKVADSEVLEPILILLSTVLVVFVS-LAASKWLLSNKVGYLLFFCYVAFVVYNIAKE 205          
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S0J6V7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J6V7_9EUKA)

HSP 1 Score: 158 bits (399), Expect = 1.220e-44
Identity = 72/172 (41.86%), Postives = 116/172 (67.44%), Query Frame = 0
Query:    1 MLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 172
            + +   ++IP+C +PR +  Y+++F MS+ WIGVL+++M  W + LGC   + P  MG+ VLA GTSVPDA+GS++ AR G+ +MA++NA+GSNVFD+L+GLG PW L  +IKGE +PVD +G+    ++L  T V   + +  + + +   +GVF F LY  +V + ++ +
Sbjct:  120 LFLLFELSIPNCSEPRNKHRYLITFTMSILWIGVLSYFMTTWASKLGCLWGIHPAVMGVTVLAAGTSVPDAIGSLLVARDGQGDMAVSNAIGSNVFDILLGLGLPWALANLIKGEEVPVDTDGLLPLSVLLMLTLVAVYAGIFLSGFVLTKSIGVFFFVLYFLFVAYSLLHD 291          
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A2R5G219_9STRA (Sodium/potassium/calcium exchanger 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G219_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.400e-44
Identity = 75/174 (43.10%), Postives = 115/174 (66.09%), Query Frame = 0
Query:    1 MLVALSVTIPDCGKP--RWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 172
            ++  L  TIPDC     R+ +W++ +F+MS+ WIG      V   + +GC L ++ I MGL++LA GTSVPD + SMI A+ G A+MAIANAVGSNVFD+L+GLG PW    +I+G P+ VDR  + +++++L  T +L++S L  N W+M  ++GV    +Y  Y+I+ ++ E
Sbjct:  373 LVALLHSTIPDCSNEDGRFHRWFISTFVMSIVWIGAACQLAVILASEIGCILGINAIIMGLILLAAGTSVPDMIASMIVAKQGHADMAIANAVGSNVFDILLGLGLPWAFAEVIRGNPVIVDRGNLKIDIVVLVITVILYISTLILNRWTMEKRIGVVFVFIYFGYIIYAILVE 546          
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S0LBD8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LBD8_9EUKA)

HSP 1 Score: 151 bits (382), Expect = 9.790e-43
Identity = 70/172 (40.70%), Postives = 114/172 (66.28%), Query Frame = 0
Query:    1 MLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 172
            + +   ++IP+C +PR +  Y+V+F MS+ WIGVL+++M  W + LGC   + P  MG+ VLA GTSVPDA+GS++ AR G+ +MA++NA+GSNVFD+L+GLG PW L  + KG+ + VD +G+    ++L  T +L  +    + + +   +GVF F LY  +V + ++ +
Sbjct:   64 LFLLFEISIPNCAEPRNKNRYLVTFFMSIFWIGVLSYFMTTWASKLGCLWGIHPAVMGVTVLAAGTSVPDAIGSLLVARDGQGDMAVSNAIGSNVFDILLGLGLPWALANMFKGKMVHVDIDGLLPLSVLLLVTLLLVYTATFLSGFVLTRGIGVFFFILYFVFVAYSLLHD 235          
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S0WLA0_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WLA0_9CHLO)

HSP 1 Score: 157 bits (397), Expect = 3.120e-42
Identity = 72/172 (41.86%), Postives = 114/172 (66.28%), Query Frame = 0
Query:    4 ALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRELVL 175
            A  +TIPDC     E WY+ +F MS+ WIG+L ++MV   N +GC +   P+ M ++VLA GTS+PD  GS+  AR G+ +MA++NA+GSNVFD+L+GLG PWF+  + +GE + V++  + +N+  LF   V +++ + WN++ +  +MG  L  LY  +VIF V+  L++
Sbjct:  353 AFWLTIPDCRLEHRETWYLATFTMSVLWIGILVYFMVWATNIIGCVINFPPVPMSVLVLAAGTSIPDMFGSLAVAREGQGDMAVSNAIGSNVFDILLGLGLPWFIMILWRGEDISVEKGDLFMNIGFLFAVLVAYMTGVIWNNYKLTARMGTALCILYACFVIFTVVYYLLI 524          
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Match: A0A7S3RHS5_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RHS5_9SPIT)

HSP 1 Score: 150 bits (378), Expect = 6.480e-41
Identity = 72/172 (41.86%), Postives = 105/172 (61.05%), Query Frame = 0
Query:    1 MLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMNTKMGVFLFCLYVAYVIFVVIRE 172
            + +    TIP+C   R +  ++ +F MS+ WIG+L+++MV W + LGC   + P  MG+ VLA GTSVPDA+GS++ AR G  +MA++NA+GSNVFD+L+GLG PW     I G  +PVD  GI    IIL  T  +         + +   +G F F LY A+V + ++RE
Sbjct:  173 LFLMFEATIPNCSLERNKGRHLTTFFMSVLWIGILSYFMVTWASKLGCIWGIHPAVMGITVLAAGTSVPDAIGSLLVARDGHGDMAVSNAIGSNVFDILLGLGLPWLFSNAIFGVSVPVDATGIVPFTIILLSTLAMIYGATFLGGFRLTKPLGAFFFTLYFAFVAWALLRE 344          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7762.19005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4C8_ECTSI3.150e-11196.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2G6T6_9STRA1.130e-4951.72Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D8LLM0_ECTSI7.810e-4944.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2H048_9STRA8.770e-4646.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1GDC6_9STRA9.970e-4544.25Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S0J6V7_9EUKA1.220e-4441.86Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A2R5G219_9STRA4.400e-4443.10Sodium/potassium/calcium exchanger 1 n=1 Tax=Honda... [more]
A0A7S0LBD8_9EUKA9.790e-4340.70Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0WLA0_9CHLO3.120e-4241.86Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S3RHS5_9SPIT6.480e-4141.86Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004836Sodium/calcium exchanger proteinPRINTSPR01259NACAEXCHNGRcoord: 26..38
score: 38.06
coord: 65..78
score: 63.53
NoneNo IPR availableGENE3D1.20.1420.30coord: 2..172
e-value: 6.4E-25
score: 89.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableTMHMMTMhelixcoord: 153..170
NoneNo IPR availableTMHMMTMhelixcoord: 90..112
NoneNo IPR availableTMHMMTMhelixcoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 20..169
e-value: 3.1E-29
score: 101.9
IPR004481Sodium/potassium/calcium exchangerPANTHERPTHR10846SODIUM/POTASSIUM/CALCIUM EXCHANGERcoord: 3..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7762contigEcto-sp13_S_contig7762:829..1356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7762.19005.1mRNA_Ecto-sp13_S_contig7762.19005.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7762 826..1356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7762.19005.1 ID=prot_Ecto-sp13_S_contig7762.19005.1|Name=mRNA_Ecto-sp13_S_contig7762.19005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
MLVALSVTIPDCGKPRWEQWYVVSFLMSLAWIGVLTHYMVEWVNGLGCFL
EVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLI
GLGFPWFLRGIIKGEPMPVDRNGIALNVIILFCTAVLFVSVLAWNDWSMN
TKMGVFLFCLYVAYVIFVVIRELVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004836Na_Ca_Ex
IPR004837NaCa_Exmemb
IPR004481K/Na/Ca-exchanger