mRNA_Ecto-sp13_S_contig7723.18961.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7723.18961.1
Unique NamemRNA_Ecto-sp13_S_contig7723.18961.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: A0A6H5L1H9_9PHAE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H9_9PHAE)

HSP 1 Score: 574 bits (1480), Expect = 1.520e-200
Identity = 335/367 (91.28%), Postives = 344/367 (93.73%), Query Frame = 1
Query:   55 MEGLPLDVILLASIGIVAVTSLVVYLRRKLASNDQDEGXXXXXXXAGVDGANNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXP--PTGVASGEGRFDNSPQGAGMAAVLALMVGTLLALAGGGEGQTAVAAGAMGAAVAAVAERYGSRASRAMPPLAGDW 1149
            MEGLPLDVILL SIGIVAVTSLVVY+ RKL SND+DE         G+DG+NNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTML+GAAGDAQAAGDTDQAHDARA +APAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXX   P  VASGEGRFDNSPQGAG+AAVLAL+VG LLALAGGGEGQTA+ AGAMGAAVAA AERYGSRA R MPPLAGDW
Sbjct:    1 MEGLPLDVILLVSIGIVAVTSLVVYISRKLTSNDEDE----EGAATGIDGSNNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTMLHGAAGDAQAAGDTDQAHDARAESAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAVASGEGRFDNSPQGAGIAAVLALLVGALLALAGGGEGQTALGAGAMGAAVAAAAERYGSRAPRVMPPLAGDW 363          
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: D7FX72_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX72_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 1.620e-134
Identity = 248/258 (96.12%), Postives = 251/258 (97.29%), Query Frame = 1
Query:  379 MCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXX-PPTGVASGEGRFDNSPQGAGMAAVLALMVGTLLALAGGGEGQTAVAAGAMGAAVAAVAERYGSRASRAMPPLAGDW 1149
            MCRQEVTMLYGAAGDAQAAGDTD+AHDARAG+APA TTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXX PP  VASGEGRFDNSPQGAGMAAVLALMVG LLALAGGGEGQTA+AAGAMGAAVAA AERYGSRA RAMPPLAGDW
Sbjct:    1 MCRQEVTMLYGAAGDAQAAGDTDEAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAVASGEGRFDNSPQGAGMAAVLALMVGALLALAGGGEGQTAMAAGAMGAAVAAAAERYGSRAPRAMPPLAGDW 258          
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: A0A2Z7CY40_9LAMI (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CY40_9LAMI)

HSP 1 Score: 129 bits (324), Expect = 5.260e-31
Identity = 73/189 (38.62%), Postives = 107/189 (56.61%), Query Frame = 1
Query:  256 CPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLS 819
            C IC S     P Q NC HWFC  CIL  ++ G  +   +CP+CR+E+T+L  +   ++      Q+H             + EI   I R+N +   R     Q ++D P LLRRL  D+ R   R    ++R  V L + V+A+Y+LSP+D+IPE L+G+ GLLDDL++V+  +LH+ S+YR VLLS
Sbjct:   10 CSICHS-NFNIPCQANCSHWFCGGCILQVWEHGAALHPCKCPLCRREITLLVPSEASSR------QSH----------MVNTAEILRSIERYNRQYGERSNGVMQRVQDLPFLLRRLLRDI-RDPQRTLPVVIRARVYLAMVVSAIYVLSPVDIIPEGLLGVIGLLDDLIIVLICVLHVASLYRAVLLS 180          
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: UPI0020095D38 (E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Salvia TaxID=21880 RepID=UPI0020095D38)

HSP 1 Score: 127 bits (320), Expect = 1.680e-30
Identity = 76/190 (40.00%), Postives = 107/190 (56.32%), Query Frame = 1
Query:  253 ECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLS 819
            EC IC     + P Q NCGHWFC RCIL  +D G  +R  +CP+CR+E+T+L              +AH    GA         EI + I  +N +      S  Q + D P LLRRL  D+     R    ++R  V L + ++A+Y+LSP+D+IPE+L+GI GLLDDL+VV    L++ ++YRTVL+S
Sbjct:    9 ECSICQQ-NFQIPCQANCGHWFCGRCILQVWDFGHALRPCKCPLCRREITLLV-----------PSEAHRTADGA---------EILQRIEHYNRQFGAHPNSLMQRMYDLPFLLRRLTRDIM-DPQRALPLVVRARVYLAMILSAMYVLSPVDIIPEALLGIIGLLDDLIVVFMCFLYVAALYRTVLVS 176          
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: A0A023GH49_AMBTT (E3 ubiquitin-protein ligase RNF170 n=3 Tax=Amblyomma TaxID=6942 RepID=A0A023GH49_AMBTT)

HSP 1 Score: 121 bits (303), Expect = 3.580e-27
Identity = 77/203 (37.93%), Postives = 115/203 (56.65%), Query Frame = 1
Query:  238 RHP----GGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGG-RVRIRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPW-QVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLS-WE 825
            RHP      +CPICL+ E   PV+TNCGH FCA C++SY+  G  R  +RCP+CRQ+V+++     D  +A DTD   + R             +  +I+ +N R SG  R PW   + D P LLR   S+       ++  + R  + L    A +Y++SP+D+IPE++ GI GLLDDL VV+ L +++T +YR  L + W+
Sbjct:   79 RHPHYGSDAQCPICLA-EPRYPVETNCGHLFCANCLVSYWHHGNWRGAVRCPVCRQQVSVMLRCFQDQHSAEDTDAQREERT-----------RLLRDINDYNRRYSGEPR-PWLDHLRDLPTLLRHAGSEFFSVGGIMY--MFRLRIVLCFVAAIMYLVSPLDMIPEAIFGILGLLDDLFVVLLLAIYVTVIYRRFLAARWQ 266          
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: A0A7J7KM54_BUGNE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KM54_BUGNE)

HSP 1 Score: 120 bits (300), Expect = 7.240e-27
Identity = 68/187 (36.36%), Postives = 106/187 (56.68%), Query Frame = 1
Query:  253 ECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTV 810
            +CP+CL   V+  ++TNCGH FC  CI++Y+  G  +  I CP CRQ VT+L  +    +   D++  +                + +E+  +N R SG  R+ W+ I+D P + R    DL   +  VF  + R  + + L +A LY+LSP+D+IPE  VGI GLLDDLV++  L L+++ +YR+V
Sbjct:   78 QCPVCLD-SVQYGLETNCGHLFCGSCIITYWQTGRWLGPIACPNCRQTVTILLNSFTAEELQEDSEAKN---------------RVLQEVRNYNRRFSGEPRTIWEYIQDLPTIFRHAIGDLFSEEGMVF--VFRARIYICLTIAVLYLLSPLDIIPEMAVGILGLLDDLVILFLLALYISMIYRSV 246          
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: UPI001FB083FF (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB083FF)

HSP 1 Score: 117 bits (292), Expect = 1.310e-26
Identity = 66/187 (35.29%), Postives = 100/187 (53.48%), Query Frame = 1
Query:  256 CPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVL 813
            C IC +    TP Q NC HWFC RCIL  +D G   +  +CP+CR+E+T+L  +   +     ++ A                E+   I R+N     +  S  Q ++D P LLRRL  DL     R    ++R  V L + V+ +YI+SP+D+IPE ++GI GLLDD ++ +   LH+ ++YR+ L
Sbjct:   10 CSICHN-NFTTPCQANCSHWFCGRCILQVWDHGSSFQPCKCPLCRREITLLIPSRASSNECNSSEVA----------------EVFGRIERYNRHFGQQTNSLVQRMQDLPFLLRRLTRDLMNPQ-RSLPFVLRMRVYLAMLVSVIYIISPVDIIPEGILGIIGLLDDAIIALICFLHVAALYRSAL 178          
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: UPI000C1D1BA9 (E3 ubiquitin-protein ligase RNF170-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D1BA9)

HSP 1 Score: 116 bits (291), Expect = 1.800e-26
Identity = 68/187 (36.36%), Postives = 102/187 (54.55%), Query Frame = 1
Query:  256 CPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVL 813
            C IC +     P Q NC HWFC  CIL  ++ G  +   +CP+CR+E+T+L  +   ++      Q HD           G  E+ +   R+N     R     Q ++D P LLRRL  DL     R    +MR  V L + ++A Y+LSP+D++PE+L+GI GLLDD ++V+   LH+ ++YR+VL
Sbjct:   10 CSICQA-NFHIPCQANCSHWFCGNCILQVWNYGSALHPCKCPLCRREITLLVPSEVSSR------QRHD----------PGVAEVLQRTERYNHIFGERSNGLMQRMQDLPFLLRRLLQDLINPQ-RSLPLVMRARVFLAIILSATYVLSPVDIVPEALLGIIGLLDDFIIVLICFLHVAALYRSVL 178          
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: A0A6M2CSY6_RHIMP (E3 ubiquitin-protein ligase RNF170 (Fragment) n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CSY6_RHIMP)

HSP 1 Score: 117 bits (294), Expect = 2.340e-26
Identity = 76/205 (37.07%), Postives = 115/205 (56.10%), Query Frame = 1
Query:  226 GRLARHPGGE--CPICLSIEVETPVQTNCGHWFCARCILSYYDQGG-RVRIRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPW-QVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLS-WE 825
            G +A H G +  CPICL  E    V+TNCGH FCA C++SY+  G  R  +RCP+CRQ+V+++     D     +TD   + RA            +  +I+ +N R SG  R PW   + D P LLR + S+       ++  + R  + L    A +Y++SP+D+IPE++ GI GLLDDL VV+ L +++T +YR  L + W+
Sbjct:   38 GSMAAHYGSDAQCPICLG-EPRHSVETNCGHLFCASCLVSYWHHGNWRGAVRCPVCRQQVSVMLRCFQDQHLPDETDAQREERA-----------RLLRDINDYNRRYSGEPR-PWLDHLRDLPTLLRHVGSEFFSMGGIMY--MFRLRIVLCFVAAIMYLISPLDMIPEAIFGILGLLDDLFVVLLLAIYVTVIYRRFLATRWQ 227          
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Match: UPI00103644AE (E3 ubiquitin-protein ligase RNF170-like n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103644AE)

HSP 1 Score: 116 bits (290), Expect = 2.460e-26
Identity = 66/188 (35.11%), Postives = 105/188 (55.85%), Query Frame = 1
Query:  256 CPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLL 816
            C IC       P Q NC HWFC  CIL  ++ G  ++  +CP+CR+++T+L  +   ++   ++D A                EI  +I R+N     R     Q + D P LLRRL+ D+ +   R    ++R  V L +FV+A+YI+SP+D+IPE ++GI GL DD+++ +   LH+ ++YR+VLL
Sbjct:   10 CSICHG-SFNLPCQANCSHWFCGNCILQVWNYGSALQPCKCPLCRRQITLLIPSDASSRQRHNSDAA----------------EILGKIERYNRYFGERSNGLIQRLRDLPFLLRRLFRDIMQPQ-RSLPLVIRARVYLAMFVSAIYIISPVDIIPEGILGIIGLFDDVLIALICFLHVAALYRSVLL 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7723.18961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H9_9PHAE1.520e-20091.28E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocar... [more]
D7FX72_ECTSI1.620e-13496.12RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A2Z7CY40_9LAMI5.260e-3138.62E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoce... [more]
UPI0020095D381.680e-3040.00E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Sa... [more]
A0A023GH49_AMBTT3.580e-2737.93E3 ubiquitin-protein ligase RNF170 n=3 Tax=Amblyom... [more]
A0A7J7KM54_BUGNE7.240e-2736.36E3 ubiquitin-protein ligase RNF170 n=1 Tax=Bugula ... [more]
UPI001FB083FF1.310e-2635.29E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatie... [more]
UPI000C1D1BA91.800e-2636.36E3 ubiquitin-protein ligase RNF170-like n=1 Tax=Ol... [more]
A0A6M2CSY6_RHIMP2.340e-2637.07E3 ubiquitin-protein ligase RNF170 (Fragment) n=2 ... [more]
UPI00103644AE2.460e-2635.11E3 ubiquitin-protein ligase RNF170-like n=2 Tax=Ca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7723contigEcto-sp13_S_contig7723:2399..6101 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score407.1
Seed ortholog evalue8.4e-111
Seed eggNOG ortholog2880.D7FX72
Model size1831
Hectar predicted targeting categorysignal anchor
Exons5
EggNOG free text desc.ubiquitin-like protein transferase activity
EggNOG OGsKOG2164@1,KOG2164@2759
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-10_004530.1
Cds size1098
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7723.18961.1prot_Ecto-sp13_S_contig7723.18961.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7723 3078..6047 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464043.0829358-UTR-Ecto-sp13_S_contig7723:2398..30771681464043.0829358-UTR-Ecto-sp13_S_contig7723:2398..3077Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7723 2399..3077 -
1681464043.1461349-UTR-Ecto-sp13_S_contig7723:6047..61011681464043.1461349-UTR-Ecto-sp13_S_contig7723:6047..6101Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7723 6048..6101 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464043.0938258-CDS-Ecto-sp13_S_contig7723:3077..35241681464043.0938258-CDS-Ecto-sp13_S_contig7723:3077..3524Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7723 3078..3524 -
1681464043.1049292-CDS-Ecto-sp13_S_contig7723:3806..41181681464043.1049292-CDS-Ecto-sp13_S_contig7723:3806..4118Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7723 3807..4118 -
1681464043.1147873-CDS-Ecto-sp13_S_contig7723:4359..44261681464043.1147873-CDS-Ecto-sp13_S_contig7723:4359..4426Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7723 4360..4426 -
1681464043.1244235-CDS-Ecto-sp13_S_contig7723:4839..50061681464043.1244235-CDS-Ecto-sp13_S_contig7723:4839..5006Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7723 4840..5006 -
1681464043.1346867-CDS-Ecto-sp13_S_contig7723:5942..60471681464043.1346867-CDS-Ecto-sp13_S_contig7723:5942..6047Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7723 5943..6047 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7723.18961.1

>prot_Ecto-sp13_S_contig7723.18961.1 ID=prot_Ecto-sp13_S_contig7723.18961.1|Name=mRNA_Ecto-sp13_S_contig7723.18961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=366bp
MEGLPLDVILLASIGIVAVTSLVVYLRRKLASNDQDEGGVAAAAAAGVDG
ANNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQG
GRVRIRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGAAPAATTGSPE
IQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMR
RGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYR
TVLLSWERSRAARAEAAAAAAATATASSAEAAAAAAAAAPPTGVASGEGR
FDNSPQGAGMAAVLALMVGTLLALAGGGEGQTAVAAGAMGAAVAAVAERY
GSRASRAMPPLAGDW*
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mRNA from alignment at Ecto-sp13_S_contig7723:2399..6101-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7723.18961.1 ID=mRNA_Ecto-sp13_S_contig7723.18961.1|Name=mRNA_Ecto-sp13_S_contig7723.18961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3703bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7723:2399..6101- (Ectocarpus species13 EcNAP12_S_4_19m)
TGTGCTGGGTGTCCTGCACCGCTACTACTGTCTCTCCTTCTCTACCTTTT CGCGATGGAAGGACTGCCGCTTGATGTCATACTGCTGGCATCGATCGGTA TTGTGGCTGTCACCTCGCTCGTTGTCTACCTTCGCAGAAAACTGGCTTCA AATGACCAGGTACATTGTAGCCAGTTTGAAAATCACCCGTGCATTGAGTT CTACCGCGTTTGTGTAAAACAGCAGAAGCACCTACTGGCTGTACGTCGTC TACCAGAGGGTAGGTTGTACTGACTTCTGCATCGCCATTTAGAACAAAAA AAGAAGTCATTGGGGTTCTCACACACAAGCCGTGCCTCCTGAATGAATGA GGCGAGCTTTGTTGTTCTCAAGCAAAAACATCGACCTTACCCAAAGTCAG ACTGACGAGCGCTCTTACACTCACTGCTGTCTGCCTAGATTGGAGGAGGT TCCTTGACCCCTAGCTGAAGAGCTTGTACTTTAGTGCGGCGGGTTTAAAC GTCGCCATCCGGGACACAGATAATCCCCTTGTGAGGGAAAGGGGGTGTCG GAAACCCCGCCCCTGCACAATTGTTCCTACAATATGCTTCATATAATAGA GGTATCCAATCCAGAAGTTTGGAGCGGACGTGTTGGTCATTAAGAAAAGC GAATATGGCATGACCGTAGTGAATGCCGTGGTGTTCTCACAACTTGGTGC AGACTGTCACCTCGAATATCAACAAGTTACGTGTATACGAGTCCTAACAA AGCGACGCACACATTATGGGGATGTGTCCGGGAGGCGGGCTCCGGGCACC TTGGGTTCATTCGTTCGCGGTGATTCGTTCGAAACTACAGAAACCGAATT AGGGGCCTCGTGCCGTGAGTCGGCGCTGCGCGCGACTTAGAAGGCCGGGC CAAGTGAGCTACAGCAGTTGAGCGAGAGCAAAGAAAACGTTAGGTCGTCA CAGTAGGGCTACAGAGTCTTCGATCGCTAGGCTACGGAGGAAGGAGAAGT TCGGACGGCGGTCATGTTTCGCAACCAGATGGGAGTATCTAGCGCCGTAT TGTTCCTTTTTGTAGATTTAACCTTCGTGCTCGCGTCGCACACAGGACGA AGGAGGCGTTGCCGCCGCCGCCGCCGCAGGAGTAGATGGGGCCAACAACG ACACAACCCCCGGCAGGCTCGCAAGACATCCAGGCGGGGAGTGCCCGATA TGCCTCTCGATCGAGGTGGAAACCCCCGTGCAAACGAACTGCGGGCATTG GTTCTGCGCCAGGTGAGGAAAGGCCTGTGTCGGAACGTCGGAACCGACGA ACAAATTCGAAAATGCCTCGAAAGGGACCAACCTACAGCAATATCAGATT AAACTACCGAGCCCCCATGTCTTAAATCGTGACTTTTTCTCCTCGGCTGG GGGCTTCTTGGAGCAGCCATGCAGTGCGCGTGGTAGCTCCGTGATTGCAT GTGTACCAACGCGTTCGGGCGCGCAGGACGTGTGTGCCTGTGCGCTACTA TGCAGGATAGTGCGAGGCTGATTCGCTTTCTACAGGGTTGAATAGCCTAG GGCCCATTTCAAGCAAGAAGCAATGTACGTACCACGTACGGCCTAAAGTT TTGTGGGGGTCGTGGGCTCTTTATGTAATGTCGTCCTGTGCCGTTCTACC AACCTGCGTTGGACTTTTGGCCCAGGTGTATTTTGAGCTACTACGATCAA GGCGGCAGGGTGCGCATTCGGTGTCCAATGTGCAGGCAGGAGGTGAGTCT CGGAATGATGCTCGGTTTCGGCCGAACCGAGCGAATGCCCTTACGATTAG CATTATTTGCTGGGGACGATTTTGTGGGGTATCAACCACCGAACGTCGAA GTAGATCGGCGCGCCTCCTTCTCTTGCGTGCTCGAAGGCACGCGCTGAAA CCCACGCACCAGCGCTGTCCCAGGCCGCAAGAATCACAAACAGCAGGCTT CTCTTGTCTCGATCGATGCCGGGCCCGCTTCAGGTTACCATGCTGTACGG AGCGGCAGGAGACGCACAGGCCGCTGGCGACACCGATCAAGCCCACGACG CAAGAGCCGGAGCAGCACCGGCAGCAACGACAGGCTCCCCGGAGATTCAG GAGGAGATATCCAGGTTCAACGACCGCAACTCGGGACGGTGGAGATCGCC GTGGCAGGTCATCGAGGACGCCCCGCTGCTGCTCCGCCGGTTGTGGTCGG ACCTCAGCCGGGGGGACACTCGGGTGTTCGGCGAGTTGATGCGAAGAGGG GTGCAGCTGCAGCTCTTCGTGGCCGCCTTGTACATTCTGAGCCCGGTGAG TGGGTGTCTTTTTCTCGCGGTGAAGGGACGCTTGTTGGTTGGCAAGTATC GGCCCGGAAATCTGAACCTGCAGAGGCGTTTGGACGCCCGCTGGGCACGC ACGGTTTAGGAAGGGCCTGCATGATAAACTGATGTACAGCAGTCGCGACC GTACGTGCATTGGCACAAATGCTTTTTTCCACCCACTCGGTACTTTTTCG GTACCCCGACTTTGTCTCCTCACCTTCACCCACCCCCGTCCCCCCATGCC TCTGTACGTCTGTCGCGAGCCTCCCAGATCGACGTGATCCCCGAGAGCCT GGTCGGAATCGCGGGTCTCCTCGACGATCTGGTAGTCGTGGTCTTCCTGC TGCTCCACCTCACCTCCGTGTATCGCACGGTTCTGCTCTCCTGGGAAAGG TCGAGAGCAGCACGCGCCGAAGCCGCTGCTGCTGCGGCCGCGACGGCAAC TGCTTCCAGTGCCGAAGCCGCCGCCGCCGCCGCCGCCGCCGCACCCCCCA CCGGGGTCGCTTCCGGCGAAGGGAGGTTTGACAACTCCCCCCAGGGGGCA GGAATGGCGGCAGTGCTCGCTCTAATGGTGGGCACGCTATTGGCGCTCGC GGGGGGCGGGGAGGGGCAAACGGCGGTGGCGGCAGGAGCGATGGGGGCCG CGGTGGCGGCAGTGGCGGAGCGCTATGGGTCAAGGGCATCGCGGGCGATG CCACCATTGGCTGGGGATTGGTAGTTGTCGTCGTGGGGGCGGTTTTCGAG CGAGAACGGAATTAGCGTGATTGCGATTCCGTTGTAGACGAGTGAACCAG AGAGCCGCTGCTTGTGTTCCATTTGGCTGGCGGTGACGGGGCGCGCGGCG GCATGCCGGTGAGGGTTGGGGCGGAGAAGCGTTTGCAGGTGGAATTGGTT TGGTTCAGCAATAGTTGTGTCTGTCTGTTGTGAGGATATGAGCAATACTA GGAAACATAAATACAAACACAGAAAGACTATCCATTCGAGATAAGACTGT TTGTTCAACATTGTGGCGCCACCCCCATTGCCACCATAAGTGTGAAGCAC ATCCCTGGAGGGTCGTGGTTATCACGCCTGATTGTTGCTGTAAAGCATGG GCGACGCAGTCGGGGTGGGTGGACGGGGGTTCGACAGCGAGTCTCGCGTT AGCTTTGTGGGTAGGAAGGTGGCGGCACACGTTGTGCACCATTTGGCCAT CCTCAACAAACGTTCCCGATGTTGGAGATGTCAAATTCCAATCCGAAAAG GATTGGTTTCTGCTGCAGAAACAAAATAACCTACTTCGTAGCACAAGAGT GCTTGACCGCGTTTTTTTTATCGCGACCGACTTGTCGCAGCTCGCGAAAG CTACGAGCACGAGATCGCGGCGGTGCCTTCGCGCGACCTACGCCTCGAGG GCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7723:2399..6101-

>mRNA_Ecto-sp13_S_contig7723.18961.1 ID=mRNA_Ecto-sp13_S_contig7723.18961.1|Name=mRNA_Ecto-sp13_S_contig7723.18961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1098bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7723:2399..6101- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAGGACTGCCGCTTGATGTCATACTGCTGGCATCGATCGGTATTGT
GGCTGTCACCTCGCTCGTTGTCTACCTTCGCAGAAAACTGGCTTCAAATG
ACCAGGACGAAGGAGGCGTTGCCGCCGCCGCCGCCGCAGGAGTAGATGGG
GCCAACAACGACACAACCCCCGGCAGGCTCGCAAGACATCCAGGCGGGGA
GTGCCCGATATGCCTCTCGATCGAGGTGGAAACCCCCGTGCAAACGAACT
GCGGGCATTGGTTCTGCGCCAGGTGTATTTTGAGCTACTACGATCAAGGC
GGCAGGGTGCGCATTCGGTGTCCAATGTGCAGGCAGGAGGTTACCATGCT
GTACGGAGCGGCAGGAGACGCACAGGCCGCTGGCGACACCGATCAAGCCC
ACGACGCAAGAGCCGGAGCAGCACCGGCAGCAACGACAGGCTCCCCGGAG
ATTCAGGAGGAGATATCCAGGTTCAACGACCGCAACTCGGGACGGTGGAG
ATCGCCGTGGCAGGTCATCGAGGACGCCCCGCTGCTGCTCCGCCGGTTGT
GGTCGGACCTCAGCCGGGGGGACACTCGGGTGTTCGGCGAGTTGATGCGA
AGAGGGGTGCAGCTGCAGCTCTTCGTGGCCGCCTTGTACATTCTGAGCCC
GATCGACGTGATCCCCGAGAGCCTGGTCGGAATCGCGGGTCTCCTCGACG
ATCTGGTAGTCGTGGTCTTCCTGCTGCTCCACCTCACCTCCGTGTATCGC
ACGGTTCTGCTCTCCTGGGAAAGGTCGAGAGCAGCACGCGCCGAAGCCGC
TGCTGCTGCGGCCGCGACGGCAACTGCTTCCAGTGCCGAAGCCGCCGCCG
CCGCCGCCGCCGCCGCACCCCCCACCGGGGTCGCTTCCGGCGAAGGGAGG
TTTGACAACTCCCCCCAGGGGGCAGGAATGGCGGCAGTGCTCGCTCTAAT
GGTGGGCACGCTATTGGCGCTCGCGGGGGGCGGGGAGGGGCAAACGGCGG
TGGCGGCAGGAGCGATGGGGGCCGCGGTGGCGGCAGTGGCGGAGCGCTAT
GGGTCAAGGGCATCGCGGGCGATGCCACCATTGGCTGGGGATTGGTAG
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