mRNA_Ecto-sp13_S_contig1226.1896.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: D8LKH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH4_ECTSI) HSP 1 Score: 315 bits (806), Expect = 2.090e-107 Identity = 155/169 (91.72%), Postives = 160/169 (94.67%), Query Frame = 1
Query: 1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVM 507
MRGKLKHIQ+YITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAE VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRD LMYKELKY+LFSKL+GDFRESYASSWHRLEQVWVGFPLPHDISSNVA+KWKV+
Sbjct: 1 MRGKLKHIQSYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAE--------VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDKLMYKELKYDLFSKLVGDFRESYASSWHRLEQVWVGFPLPHDISSNVAIKWKVL 161
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A6H5JJ50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ50_9PHAE) HSP 1 Score: 292 bits (747), Expect = 3.760e-98 Identity = 147/175 (84.00%), Postives = 151/175 (86.29%), Query Frame = 1
Query: 49 YNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQS----------------------VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVM 507
YNYTGEAFFVKKKDRGFRHVTSTAK IIREALPIQCVEAVFVGAYLTADMAEAGP FFQ+ VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKL+GDFRESYAS+WHRLEQVWVGFPLPHDISSNVAVKWKV+
Sbjct: 5 YNYTGEAFFVKKKDRGFRHVTSTAKQIIREALPIQCVEAVFVGAYLTADMAEAGPLFFQTLADSSTLSPYLRRFLLPGYMVGVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLVGDFRESYASNWHRLEQVWVGFPLPHDISSNVAVKWKVL 179
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A835YRP7_9STRA (Vasohibin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRP7_9STRA) HSP 1 Score: 190 bits (483), Expect = 8.900e-58 Identity = 88/168 (52.38%), Postives = 121/168 (72.02%), Query Frame = 1
Query: 1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKV 504
+R KLK +Q YI + EYN+TG+ ++ KK RGF HV + A+ I+REALPIQCVEA F+GAYLT D+ + V+R+P+ F+S+L+G +RHIVLAV SGGKWG+LG+SRRD L YKELKY L+ +F +Y S WH+L+ +++G PLP + S N ++WKV
Sbjct: 31 LRDKLKQLQKYIEAFEYNHTGKCYYSTKKFRGFAHVANVAQDIMREALPIQCVEATFLGAYLTCDLRD--------VERYPLSFKSALEGHEHRHIVLAVTSGGKWGALGISRRDCLAYKELKYSSLGALVAEFAAAYTSCWHQLQAIYLGLPLPRNPSCNAPIRWKV 190
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A1W0A7K4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7K4_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.650e-50 Identity = 94/210 (44.76%), Postives = 128/210 (60.95%), Query Frame = 1
Query: 1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTAD--MAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
+R KL IQ Y+ +LEYNYTG+ +F K R ++ + TAK II E+LPIQC+EAVFV AYLTA+ G Q VDR P+ F+S G V+RHIVL ++ WG+LGLSR LM KELKY+ FS+LL D+ E +A H + +++VGFP HDI S+ V+W+V+ + P W + A + F + L G+LPD
Sbjct: 38 VRSKLHAIQTYLNALEYNYTGKLYFNVNKHRSYKSIYGTAKEIIHESLPIQCLEAVFVAAYLTANGNTEYEGMNPNQQVDRVPISFKSRSGGTVFRHIVLGIKHQHMWGALGLSRNADLMNKELKYKNFSELLADYIEHFAKCCHEVTKIYVGFPFSHDIHSSEKVQWRVLNIKISDHP-WDAVAAQFDLFTREHSELMSHLHRVGELPD 246
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A1V9ZEI7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEI7_9STRA) HSP 1 Score: 175 bits (443), Expect = 6.020e-49 Identity = 93/214 (43.46%), Postives = 131/214 (61.21%), Query Frame = 1
Query: 1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFF------QSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
++ KL IQAY+++LEYNYTG +F K+R ++ + TAK II EALPIQC+EAVFV AYLTA G P + Q +DR P+ F+S +RHIVL VR WG+LGLSR LM K+LKY+ FS L+ D+ E++ H++ +V+VGFP HDI S+ V+W+V+ + P W + A ++ F ++ L G+LPD
Sbjct: 40 IKAKLHAIQAYLSALEYNYTGRLYFNVNKNRSYKSIYGTAKEIISEALPIQCLEAVFVAAYLTAH----GMPEYEGLNPSQQIDRVPISFKSRSGDSTFRHIVLGVRHQHVWGALGLSRSPALMNKDLKYKSFSDLVADYIENFVKCQHQVTKVYVGFPFSHDIHSSEKVQWRVLNIKIVEHP-WEAVAAQIDLFTRESSELMSHLHRVGELPD 248
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: K3X8V2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8V2_GLOUD) HSP 1 Score: 171 bits (433), Expect = 1.200e-48 Identity = 92/209 (44.02%), Postives = 132/209 (63.16%), Query Frame = 1
Query: 1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVR-SGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
++ +L IQ I +LEYNYTG +F K+R F+ + STAK I+ E LPIQC+EAVF+ +YLTA+ ++ ++RFP+ F+S V+RHI+LAVR KWG+LGLSR D LMYKELKY S+L+ DF + +HR+ +V+VGFP HDI S+ V+W+VM ++ + EW+ AA + F A + + G LP+
Sbjct: 39 IKTRLIGIQHVINTLEYNYTGTQYFDVNKNRSFKSIVSTAKDIVNETLPIQCLEAVFLASYLTANASD--------LERFPISFKSIAGTNVHRHIILAVRYQHNKWGALGLSRSDKLMYKELKYASLSELIQDFCHEFELLYHRVLKVYVGFPFSHDIHSSEKVEWRVMNISLEFN-EWTDAAQHFDSFAKDAVDILAYKKSKGVLPE 238
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: W4G7H5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7H5_9STRA) HSP 1 Score: 173 bits (438), Expect = 3.790e-48 Identity = 92/209 (44.02%), Postives = 127/209 (60.77%), Query Frame = 1
Query: 1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAE-AGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
+R K+ IQ Y+ +LEYNYTG+ +F K+R + + TAK II +ALPIQC+EAVF+ AYLTA E G F +DR P+ F++S G +RHIVLA++ WG+LGLSR LM KELK++ S L+G+F E Y + H + +V+VGFP HDI S V+W+V+ + P W + A L+ F + L G LPD
Sbjct: 41 VRTKMAAIQTYMNALEYNYTGKMYFDVSKNRSHKSIYGTAKDIIHDALPIQCLEAVFLAAYLTAGGPEYEGATFNHQIDRIPISFKTSSGGTTFRHIVLAIKHQHLWGALGLSRSPGLMNKELKFKSLSDLVGNFVEQYTAVCHDVIKVYVGFPFSHDIHSTERVEWRVLNIKLSIHP-WDNVAAQLDLFTREYSELMSHLHRVGDLPD 248
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A2D4BXV4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV4_PYTIN) HSP 1 Score: 171 bits (434), Expect = 5.980e-48 Identity = 92/208 (44.23%), Postives = 126/208 (60.58%), Query Frame = 1
Query: 1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
++ +L +Q Y+ SLEYNYTG +F K+R F+ + +TAK I E LPIQC+EAVF+ AY+TA+ F ++RFP+ F+S V+RHIVLAVR KWG+LGLSR + LMYKEL++ S+L DF + S H + ++ VGFP PHDI S+ V+W+V+ V T EWS A L+ A L G +PD
Sbjct: 42 IKTRLMAVQNYLNSLEYNYTGTLYFDVNKNRSFKSIVNTAKEIAAEMLPIQCLEAVFLAAYITAN--------FPDLERFPLSFKSQAGNSVHRHIVLAVRHQNKWGALGLSRSERLMYKELRFNSLSELTQDFCHGFESVCHVVTKLHVGFPFPHDIHSSEKVEWRVLNVPVDT-VEWSHVATHLDAXAKEAGDLLAFRRAKGAMPD 240
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A067CTS0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTS0_SAPPC) HSP 1 Score: 172 bits (435), Expect = 8.040e-48 Identity = 87/214 (40.65%), Postives = 134/214 (62.62%), Query Frame = 1
Query: 1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQS------VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
++ KL +Q Y+ +LEYNYTG+ +F K R ++ + TAK I+ EALPIQC+EAVFV AYLTA G P ++ ++R P+ F+S+ G V+RHIVL V+ WG+LGLSR +LM K+LKY+ FS+LL D+ E+++ H + +++VGFP HDI S+ V+W+V+ + P W + A + F+ ++ + G+LP+
Sbjct: 36 IKTKLHAVQTYLNALEYNYTGKLYFNVNKHRSYKSIYGTAKEIMAEALPIQCLEAVFVAAYLTAH----GMPEYEGMNPSHQIERVPISFKSTSGGSVFRHIVLGVKHQHLWGALGLSRNPSLMNKDLKYKHFSELLADYVENFSKCHHTVTKIYVGFPFSHDIHSSEKVQWRVLNIKISEHP-WDAVAGQFDLFLRESSEIMSHLHRVGELPE 244
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A485KK56_9STRA (Aste57867_8397 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK56_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.510e-46 Identity = 91/210 (43.33%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEA-GPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPDH 627
+R KL IQ Y+ +LEYNYTG+ +F K+R + + TAK II EALPIQC+EAVFV AYLTA + G F Q VDR P+ F++ G V+RHIVLA++ WG+LGLSR LM K+LK++ S L+ ++ E+Y +H++ +V++GFP HDI S V+W+V+ + P W++ A L+ F L G+LP++
Sbjct: 38 VRAKLFSIQNYLNALEYNYTGKIYFDVSKNRSHKSIYGTAKEIIHEALPIQCLEAVFVAAYLTAGGPDYDGGSFSQHVDRIPISFKTQSGGTVFRHIVLAIKHQHLWGALGLSRNAGLMTKDLKFKCLSDLVQNYMENYNKCYHQVVKVYIGFPFSHDIHSTEKVEWRVLNIKLSIHP-WTTVASQLDYFSREYPELMSHLHRVGELPEY 246 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1226.1896.1 >prot_Ecto-sp13_S_contig1226.1896.1 ID=prot_Ecto-sp13_S_contig1226.1896.1|Name=mRNA_Ecto-sp13_S_contig1226.1896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIback to top mRNA from alignment at Ecto-sp13_S_contig1226:7376..9285- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1226.1896.1 ID=mRNA_Ecto-sp13_S_contig1226.1896.1|Name=mRNA_Ecto-sp13_S_contig1226.1896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1910bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1226:7376..9285- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1226:7376..9285- >mRNA_Ecto-sp13_S_contig1226.1896.1 ID=mRNA_Ecto-sp13_S_contig1226.1896.1|Name=mRNA_Ecto-sp13_S_contig1226.1896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1226:7376..9285- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |