mRNA_Ecto-sp13_S_contig1226.1896.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1226.1896.1
Unique NamemRNA_Ecto-sp13_S_contig1226.1896.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: D8LKH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH4_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 2.090e-107
Identity = 155/169 (91.72%), Postives = 160/169 (94.67%), Query Frame = 1
Query:    1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVM 507
            MRGKLKHIQ+YITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAE        VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRD LMYKELKY+LFSKL+GDFRESYASSWHRLEQVWVGFPLPHDISSNVA+KWKV+
Sbjct:    1 MRGKLKHIQSYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAE--------VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDKLMYKELKYDLFSKLVGDFRESYASSWHRLEQVWVGFPLPHDISSNVAIKWKVL 161          
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A6H5JJ50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ50_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 3.760e-98
Identity = 147/175 (84.00%), Postives = 151/175 (86.29%), Query Frame = 1
Query:   49 YNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQS----------------------VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVM 507
            YNYTGEAFFVKKKDRGFRHVTSTAK IIREALPIQCVEAVFVGAYLTADMAEAGP FFQ+                      VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKL+GDFRESYAS+WHRLEQVWVGFPLPHDISSNVAVKWKV+
Sbjct:    5 YNYTGEAFFVKKKDRGFRHVTSTAKQIIREALPIQCVEAVFVGAYLTADMAEAGPLFFQTLADSSTLSPYLRRFLLPGYMVGVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLVGDFRESYASNWHRLEQVWVGFPLPHDISSNVAVKWKVL 179          
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A835YRP7_9STRA (Vasohibin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRP7_9STRA)

HSP 1 Score: 190 bits (483), Expect = 8.900e-58
Identity = 88/168 (52.38%), Postives = 121/168 (72.02%), Query Frame = 1
Query:    1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKV 504
            +R KLK +Q YI + EYN+TG+ ++  KK RGF HV + A+ I+REALPIQCVEA F+GAYLT D+ +        V+R+P+ F+S+L+G  +RHIVLAV SGGKWG+LG+SRRD L YKELKY     L+ +F  +Y S WH+L+ +++G PLP + S N  ++WKV
Sbjct:   31 LRDKLKQLQKYIEAFEYNHTGKCYYSTKKFRGFAHVANVAQDIMREALPIQCVEATFLGAYLTCDLRD--------VERYPLSFKSALEGHEHRHIVLAVTSGGKWGALGISRRDCLAYKELKYSSLGALVAEFAAAYTSCWHQLQAIYLGLPLPRNPSCNAPIRWKV 190          
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A1W0A7K4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7K4_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.650e-50
Identity = 94/210 (44.76%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTAD--MAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
            +R KL  IQ Y+ +LEYNYTG+ +F   K R ++ +  TAK II E+LPIQC+EAVFV AYLTA+      G    Q VDR P+ F+S   G V+RHIVL ++    WG+LGLSR   LM KELKY+ FS+LL D+ E +A   H + +++VGFP  HDI S+  V+W+V+   +   P W + A   + F    + L       G+LPD
Sbjct:   38 VRSKLHAIQTYLNALEYNYTGKLYFNVNKHRSYKSIYGTAKEIIHESLPIQCLEAVFVAAYLTANGNTEYEGMNPNQQVDRVPISFKSRSGGTVFRHIVLGIKHQHMWGALGLSRNADLMNKELKYKNFSELLADYIEHFAKCCHEVTKIYVGFPFSHDIHSSEKVQWRVLNIKISDHP-WDAVAAQFDLFTREHSELMSHLHRVGELPD 246          
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A1V9ZEI7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEI7_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.020e-49
Identity = 93/214 (43.46%), Postives = 131/214 (61.21%), Query Frame = 1
Query:    1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFF------QSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
            ++ KL  IQAY+++LEYNYTG  +F   K+R ++ +  TAK II EALPIQC+EAVFV AYLTA     G P +      Q +DR P+ F+S      +RHIVL VR    WG+LGLSR   LM K+LKY+ FS L+ D+ E++    H++ +V+VGFP  HDI S+  V+W+V+   +   P W + A  ++ F   ++ L       G+LPD
Sbjct:   40 IKAKLHAIQAYLSALEYNYTGRLYFNVNKNRSYKSIYGTAKEIISEALPIQCLEAVFVAAYLTAH----GMPEYEGLNPSQQIDRVPISFKSRSGDSTFRHIVLGVRHQHVWGALGLSRSPALMNKDLKYKSFSDLVADYIENFVKCQHQVTKVYVGFPFSHDIHSSEKVQWRVLNIKIVEHP-WEAVAAQIDLFTRESSELMSHLHRVGELPD 248          
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: K3X8V2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8V2_GLOUD)

HSP 1 Score: 171 bits (433), Expect = 1.200e-48
Identity = 92/209 (44.02%), Postives = 132/209 (63.16%), Query Frame = 1
Query:    1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVR-SGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
            ++ +L  IQ  I +LEYNYTG  +F   K+R F+ + STAK I+ E LPIQC+EAVF+ +YLTA+ ++        ++RFP+ F+S     V+RHI+LAVR    KWG+LGLSR D LMYKELKY   S+L+ DF   +   +HR+ +V+VGFP  HDI S+  V+W+VM  ++  + EW+ AA   + F   A  +     + G LP+
Sbjct:   39 IKTRLIGIQHVINTLEYNYTGTQYFDVNKNRSFKSIVSTAKDIVNETLPIQCLEAVFLASYLTANASD--------LERFPISFKSIAGTNVHRHIILAVRYQHNKWGALGLSRSDKLMYKELKYASLSELIQDFCHEFELLYHRVLKVYVGFPFSHDIHSSEKVEWRVMNISLEFN-EWTDAAQHFDSFAKDAVDILAYKKSKGVLPE 238          
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: W4G7H5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7H5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.790e-48
Identity = 92/209 (44.02%), Postives = 127/209 (60.77%), Query Frame = 1
Query:    1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAE-AGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
            +R K+  IQ Y+ +LEYNYTG+ +F   K+R  + +  TAK II +ALPIQC+EAVF+ AYLTA   E  G  F   +DR P+ F++S  G  +RHIVLA++    WG+LGLSR   LM KELK++  S L+G+F E Y +  H + +V+VGFP  HDI S   V+W+V+   +   P W + A  L+ F    + L       G LPD
Sbjct:   41 VRTKMAAIQTYMNALEYNYTGKMYFDVSKNRSHKSIYGTAKDIIHDALPIQCLEAVFLAAYLTAGGPEYEGATFNHQIDRIPISFKTSSGGTTFRHIVLAIKHQHLWGALGLSRSPGLMNKELKFKSLSDLVGNFVEQYTAVCHDVIKVYVGFPFSHDIHSTERVEWRVLNIKLSIHP-WDNVAAQLDLFTREYSELMSHLHRVGDLPD 248          
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A2D4BXV4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV4_PYTIN)

HSP 1 Score: 171 bits (434), Expect = 5.980e-48
Identity = 92/208 (44.23%), Postives = 126/208 (60.58%), Query Frame = 1
Query:    1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
            ++ +L  +Q Y+ SLEYNYTG  +F   K+R F+ + +TAK I  E LPIQC+EAVF+ AY+TA+        F  ++RFP+ F+S     V+RHIVLAVR   KWG+LGLSR + LMYKEL++   S+L  DF   + S  H + ++ VGFP PHDI S+  V+W+V+   V T  EWS  A  L+     A  L       G +PD
Sbjct:   42 IKTRLMAVQNYLNSLEYNYTGTLYFDVNKNRSFKSIVNTAKEIAAEMLPIQCLEAVFLAAYITAN--------FPDLERFPLSFKSQAGNSVHRHIVLAVRHQNKWGALGLSRSERLMYKELRFNSLSELTQDFCHGFESVCHVVTKLHVGFPFPHDIHSSEKVEWRVLNVPVDT-VEWSHVATHLDAXAKEAGDLLAFRRAKGAMPD 240          
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A067CTS0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTS0_SAPPC)

HSP 1 Score: 172 bits (435), Expect = 8.040e-48
Identity = 87/214 (40.65%), Postives = 134/214 (62.62%), Query Frame = 1
Query:    1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEAGPPFFQS------VDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPD 624
            ++ KL  +Q Y+ +LEYNYTG+ +F   K R ++ +  TAK I+ EALPIQC+EAVFV AYLTA     G P ++       ++R P+ F+S+  G V+RHIVL V+    WG+LGLSR  +LM K+LKY+ FS+LL D+ E+++   H + +++VGFP  HDI S+  V+W+V+   +   P W + A   + F+  ++ +       G+LP+
Sbjct:   36 IKTKLHAVQTYLNALEYNYTGKLYFNVNKHRSYKSIYGTAKEIMAEALPIQCLEAVFVAAYLTAH----GMPEYEGMNPSHQIERVPISFKSTSGGSVFRHIVLGVKHQHLWGALGLSRNPSLMNKDLKYKHFSELLADYVENFSKCHHTVTKIYVGFPFSHDIHSSEKVQWRVLNIKISEHP-WDAVAGQFDLFLRESSEIMSHLHRVGELPE 244          
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Match: A0A485KK56_9STRA (Aste57867_8397 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK56_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.510e-46
Identity = 91/210 (43.33%), Postives = 131/210 (62.38%), Query Frame = 1
Query:    1 MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEA-GPPFFQSVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWVGFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESFTTTGKLPDH 627
            +R KL  IQ Y+ +LEYNYTG+ +F   K+R  + +  TAK II EALPIQC+EAVFV AYLTA   +  G  F Q VDR P+ F++   G V+RHIVLA++    WG+LGLSR   LM K+LK++  S L+ ++ E+Y   +H++ +V++GFP  HDI S   V+W+V+   +   P W++ A  L+ F      L       G+LP++
Sbjct:   38 VRAKLFSIQNYLNALEYNYTGKIYFDVSKNRSHKSIYGTAKEIIHEALPIQCLEAVFVAAYLTAGGPDYDGGSFSQHVDRIPISFKTQSGGTVFRHIVLAIKHQHLWGALGLSRNAGLMTKDLKFKCLSDLVQNYMENYNKCYHQVVKVYIGFPFSHDIHSTEKVEWRVLNIKLSIHP-WTTVASQLDYFSREYPELMSHLHRVGELPEY 246          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1226.1896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKH4_ECTSI2.090e-10791.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ50_9PHAE3.760e-9884.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YRP7_9STRA8.900e-5852.38Vasohibin-domain-containing protein n=1 Tax=Tribon... [more]
A0A1W0A7K4_9STRA3.650e-5044.76Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9ZEI7_9STRA6.020e-4943.46Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
K3X8V2_GLOUD1.200e-4844.02Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W4G7H5_9STRA3.790e-4844.02Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A2D4BXV4_PYTIN5.980e-4844.23Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A067CTS0_SAPPC8.040e-4840.65Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485KK56_9STRA1.510e-4643.33Aste57867_8397 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1226contigEcto-sp13_S_contig1226:7376..9285 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score315.8
Seed ortholog evalue1.6e-83
Seed eggNOG ortholog2880.D8LKH4
Preferred nameVASH1
Model size672
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000768,GO:0001525,GO:0001568,GO:0001701,GO:0001890,GO:0001892,GO:0001936,GO:0001937,GO:0001938,GO:0001944,GO:0003006,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006949,GO:0006950,GO:0007275,GO:0008150,GO:0008284,GO:0008285,GO:0009611,GO:0009653,GO:0009790,GO:0009792,GO:0009893,GO:0009987,GO:0010468,GO:0010594,GO:0010596,GO:0010604,GO:0010628,GO:0010632,GO:0010633,GO:0012505,GO:0016043,GO:0016525,GO:0019222,GO:0022414,GO:0022603,GO:0030334,GO:0030336,GO:0032501,GO:0032502,GO:0032879,GO:0035239,GO:0035295,GO:0040012,GO:0040013,GO:0042127,GO:0043009,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043535,GO:0043537,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045026,GO:0045177,GO:0045765,GO:0045766,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048583,GO:0048608,GO:0048646,GO:0048731,GO:0048856,GO:0050678,GO:0050679,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051239,GO:0051240,GO:0051241,GO:0051270,GO:0051271,GO:0060255,GO:0060674,GO:0060711,GO:0060716,GO:0061024,GO:0061025,GO:0061458,GO:0065007,GO:0071840,GO:0072358,GO:0072359,GO:0080134,GO:0080135,GO:0090342,GO:1901342,GO:1901343,GO:1901490,GO:1901491,GO:1904018,GO:2000026,GO:2000145,GO:2000146,GO:2000181,GO:2000772
Exons5
EggNOG free text desc.negative regulation of lymphangiogenesis
EggNOG OGs2BW4P@1,2QPPX@2759
Ec32 ortholog descriptionVasohibin
Ec32 orthologEc-16_002970.1
Cds size672
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462651.816729-CDS-Ecto-sp13_S_contig1226:7375..75461681462651.816729-CDS-Ecto-sp13_S_contig1226:7375..7546Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1226 7376..7546 -
1681462651.8295648-CDS-Ecto-sp13_S_contig1226:7919..80521681462651.8295648-CDS-Ecto-sp13_S_contig1226:7919..8052Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1226 7920..8052 -
1681462651.8384836-CDS-Ecto-sp13_S_contig1226:8244..83841681462651.8384836-CDS-Ecto-sp13_S_contig1226:8244..8384Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1226 8245..8384 -
1681462651.8467402-CDS-Ecto-sp13_S_contig1226:8663..88441681462651.8467402-CDS-Ecto-sp13_S_contig1226:8663..8844Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1226 8664..8844 -
1681462651.8546977-CDS-Ecto-sp13_S_contig1226:9238..92851681462651.8546977-CDS-Ecto-sp13_S_contig1226:9238..9285Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1226 9239..9285 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1226.1896.1prot_Ecto-sp13_S_contig1226.1896.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1226 7376..9285 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1226.1896.1

>prot_Ecto-sp13_S_contig1226.1896.1 ID=prot_Ecto-sp13_S_contig1226.1896.1|Name=mRNA_Ecto-sp13_S_contig1226.1896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp
MRGKLKHIQAYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPI
QCVEAVFVGAYLTADMAEAGPPFFQSVDRFPVCFRSSLDGRVYRHIVLAV
RSGGKWGSLGLSRRDTLMYKELKYELFSKLLGDFRESYASSWHRLEQVWV
GFPLPHDISSNVAVKWKVMRANVGTDPEWSSAADDLNRFVACATSLFESF
TTTGKLPDHPLLSNSTDTSSSSSN
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mRNA from alignment at Ecto-sp13_S_contig1226:7376..9285-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1226.1896.1 ID=mRNA_Ecto-sp13_S_contig1226.1896.1|Name=mRNA_Ecto-sp13_S_contig1226.1896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1910bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1226:7376..9285- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGGGAAAACTGAAGCATATCCAGGCCTACATCACGTCTCTCGAGTG AGCTCATGCTCCGTCTACTCAGCTAAGGGCGTAGCACTGTTAGCAACTTG TTGTCGCCTTTGCACTTATACGTTGTGGAAGCCACTTGTCATCAACTGCG CACGTGTTGGTGACTACATGCCTTCACCAGCCAAACACGCCCCGGGCAGT CGGCTGCGGCAGATAGATGTGAATCATTGGTAGCCATCTCTCCGTGAGAT ACTGTAAAAGTTCTATATAGCGCGTGCGCACAATCTGATCCTTCGTAATG ATGTTCTCGGTTCAATGTGGTTTATTGTTTCATACCTCGCAATCGCGAGC AAAAGGCGTGCATTCAAGTATATTGAGAGTCTACCGTAGCCCCAAAATGT ACAACAAAAAGCATCGTAACCAATATATCACGTCACCCCAGGTACAACTA CACGGGCGAAGCCTTCTTCGTGAAAAAAAAGGACCGCGGGTTCAGACACG TGACGTCCACAGCGAAGCTGATCATCCGTGAGGCGCTGCCGATCCAATGC GTCGAGGCCGTCTTCGTCGGGGCGTACCTTACCGCGGACATGGCTGAGGC AGGTCCTCCATTTTTTCAATCTGTACGAGACTCGTCCACACTGTCTCCAA AATCACGTCGCGTCTGCTAGGTTACATGGTGGGTGTGGGTCACTACACCC CATGCTCTGTGATCCTGTATGAACCCCTTTGCTGCGGAAAAGCAATCCAC AGATGCTAAATTTCAATAATGTAGAAATTGGTATCTCATTCGTTCCCTGC CCGCGAAAACTCGTTGCTCCCTACGTTGATTACAGCCGTTTCATACAAAC CCTCCTGCCCCTCTCTACGCGACAACCTGAAATCTGTATCGCCGACCACA GGTCGATCGTTTTCCTGTATGCTTCCGATCGTCTCTGGATGGGCGCGTGT ACAGGCACATTGTTTTAGCCGTGCGTAGCGGGGGGAAGTGGGGTTCTCTG GGTCTGAGTCGCCGCGACACGCTCATGTACAAGGAACTGAAGTGAGTCAT TCCCTTGTACGACAAGAGATGGGTAGATTGCCGTTGCCCTAACGGGTACT CTAACTTGTACGGCGTGATTCTCCAACAAGATCTACGAGATTTCTCCGGT AGTCGTGATGACTTAAGTCCATATACATACGATATCAACTTCACACCGAC GCACCATGCCACGCACGGGTATGCATGTTGTAGGTACGAGCTGTTTTCGA AGCTTTTAGGCGACTTCAGGGAATCTTACGCTAGCAGCTGGCACCGCCTG GAACAGGTCTGGGTAGGCTTCCCTCTTCCTCATGACATATCTTCCAACGT GGCCGTCAAGTGGAAGGTATTGGTGGTGTGAATTTTCTGCCATGTGTTCC TGAGCTGTTGGGACAAATGACATAAAATCAAAATGTTGGCAGCAGTTCAC GGACGGTAGAAATCTGGCACCAGACCTGCGACTCGGTTCCACTCGCGGGG GTCGATATTGTATTTTCGAGTGAGCGAGTCTTCAAATATGAACCACAGCG TCAAAGTTTCGTCCGTTGGCATGGTGACAACCATGCCGTAAGCCGTCGGG TACATCAGCGAGAAGTGATCACGCGACTTGTATTTCCTTGTTCCGACCTA TGGCGGCTGAATTTACGTGTTGATACGAGACCCCCAAAAGCTAGCGCCAA ACTGCTCGCCAAAACAGTATGCTGCTTTCACTGGTCCAGGTGATGCGAGC GAACGTTGGAACGGATCCGGAATGGTCGTCAGCCGCAGACGATCTCAACC GCTTCGTTGCCTGCGCGACTAGCCTTTTCGAGAGCTTCACCACCACCGGA AAGCTGCCCGACCACCCTCTCCTCAGCAATAGTACCGACACCAGCAGCAG CAGCAGCAAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1226:7376..9285-

>mRNA_Ecto-sp13_S_contig1226.1896.1 ID=mRNA_Ecto-sp13_S_contig1226.1896.1|Name=mRNA_Ecto-sp13_S_contig1226.1896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1226:7376..9285- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGGGAAAACTGAAGCATATCCAGGCCTACATCACGTCTCTCGAGTA
CAACTACACGGGCGAAGCCTTCTTCGTGAAAAAAAAGGACCGCGGGTTCA
GACACGTGACGTCCACAGCGAAGCTGATCATCCGTGAGGCGCTGCCGATC
CAATGCGTCGAGGCCGTCTTCGTCGGGGCGTACCTTACCGCGGACATGGC
TGAGGCAGGTCCTCCATTTTTTCAATCTGTCGATCGTTTTCCTGTATGCT
TCCGATCGTCTCTGGATGGGCGCGTGTACAGGCACATTGTTTTAGCCGTG
CGTAGCGGGGGGAAGTGGGGTTCTCTGGGTCTGAGTCGCCGCGACACGCT
CATGTACAAGGAACTGAAGTACGAGCTGTTTTCGAAGCTTTTAGGCGACT
TCAGGGAATCTTACGCTAGCAGCTGGCACCGCCTGGAACAGGTCTGGGTA
GGCTTCCCTCTTCCTCATGACATATCTTCCAACGTGGCCGTCAAGTGGAA
GGTGATGCGAGCGAACGTTGGAACGGATCCGGAATGGTCGTCAGCCGCAG
ACGATCTCAACCGCTTCGTTGCCTGCGCGACTAGCCTTTTCGAGAGCTTC
ACCACCACCGGAAAGCTGCCCGACCACCCTCTCCTCAGCAATAGTACCGA
CACCAGCAGCAGCAGCAGCAAC
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