prot_Ecto-sp13_S_contig7714.18954.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7714.18954.1
Unique Nameprot_Ecto-sp13_S_contig7714.18954.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length386
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7714.18954.1 vs. uniprot
Match: A0A6H5KJB2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB2_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 3.580e-15
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0 
Query:  338 VREFRARAMRYLFGHDHDEYEENDSGRGAGETIEAFARRCLTESKRIT 385
            +RE RAR M YLFGHDHDE+EENDSGRGAGETIEAFARRCL ESKRIT
Sbjct:  784 LRELRARTMWYLFGHDHDEHEENDSGRGAGETIEAFARRCLAESKRIT 831
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7714.18954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJB2_9PHAE3.580e-1587.50Reverse transcriptase domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7714contigEcto-sp13_S_contig7714:2902..5667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7714.18954.1mRNA_Ecto-sp13_S_contig7714.18954.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7714 2902..5667 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7714.18954.1 ID=prot_Ecto-sp13_S_contig7714.18954.1|Name=mRNA_Ecto-sp13_S_contig7714.18954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=386bp
MPRGGLTLRDRHRSAGSNGLHRQQTERPSSGRNPEVNAPSAKDADGLCEP
DENLKDRAALGVSHGGLEVRKDARETCAEGQTSMSRERTEIGPVYSRWHE
IKESSLLANAWREKAEEVVMQTTGCGAKVTSSTDCKRACYPPQWDYFRDR
RREPIDRSKITVPQSLIGRVSADAAMERLKVPPTITTCWQTSCTGETPRK
VAGPSARRDTRSSTTGRVSAYLSIKAEQIRSRRDHERWLLRVASGLHTPT
QDPLRLAEDCLESTICLTGNTQRQLGTSPPPGGCADSNHEKLDHLNILEP
HESEADERAAAERREFLSCAHLEGLVDSARRLLEDEAVREFRARAMRYLF
GHDHDEYEENDSGRGAGETIEAFARRCLTESKRIT*
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