prot_Ecto-sp13_S_contig7687.18916.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7687.18916.1
Unique Nameprot_Ecto-sp13_S_contig7687.18916.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length345
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7687.18916.1 vs. uniprot
Match: D8LH16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH16_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.110e-36
Identity = 143/167 (85.63%), Postives = 150/167 (89.82%), Query Frame = 0 
Query:  135 EVASVPPVAAVSAPPSXXXXXXXXXXXXTGRVXXXXXXXXXXXXXXXXXXSPKTVVAEEKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXX------IKGSGKVASQDEDQLTPLDMLVGPFMVFATGMQKEAEFLEGELNQRVSQVTAEFQADRKNMEETLREDEAE 295
            EVAS+PPVAAVSAPPS       XXXXXTG  XXXXXXXXXXXXXXXXXXSPKTVVAEEK++  XXXXXXXXXXXXXXXXXXXXXXXXXX      IKGSGKVASQDED+LTPLDMLVGPFMVFATGMQKEAEFLEGELNQRVSQVTAEFQADRKNMEETLRE+E++
Sbjct:  486 EVASIPPVAAVSAPPSPNSGVSAXXXXXTGGXXXXXXXXXXXXXXXXXXXSPKTVVAEEKEKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEIKGSGKVASQDEDKLTPLDMLVGPFMVFATGMQKEAEFLEGELNQRVSQVTAEFQADRKNMEETLRENESD 652
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7687.18916.1 vs. uniprot
Match: A0A6H5JEP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP1_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 5.520e-31
Identity = 133/190 (70.00%), Postives = 138/190 (72.63%), Query Frame = 0 
Query:  135 EVASVPPVAAVSAPPSXXXXXXXXXXXXTGRVXXXXXXXXXXXXXXXXXXSPKTVVAEEKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXIK----------------------GSGKVASQDEDQLTPLDMLVGPFMVFATGMQKEAEFLEGELNQRVSQVTAEFQADRKNMEETLREDEAEEVRTRLE 302
            EVAS+PPV+AVSAPP     XXXXXXXXTG            XXXXX   SPKTVVAEEKKE   XXXXXXXXXXXXXXXXXXXXXXXXX                        GSGKVASQD+DQLTPLDMLVGPF+VFATGMQKEAEFLEGELNQRVSQVTAEFQADRKNMEETLRE  AEE   RL+
Sbjct:  516 EVASIPPVSAVSAPPLPNSGXXXXXXXXTG-----------GXXXXXSPNSPKTVVAEEKKEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGKVASQDDDQLTPLDMLVGPFIVFATGMQKEAEFLEGELNQRVSQVTAEFQADRKNMEETLRE--AEEQLKRLQ 692
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7687.18916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH16_ECTSI1.110e-3685.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEP1_9PHAE5.520e-3170.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 275..345
NoneNo IPR availableCOILSCoilCoilcoord: 188..224
NoneNo IPR availableCOILSCoilCoilcoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7687contigEcto-sp13_S_contig7687:3663..7301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7687.18916.1mRNA_Ecto-sp13_S_contig7687.18916.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7687 3663..7301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7687.18916.1 ID=prot_Ecto-sp13_S_contig7687.18916.1|Name=mRNA_Ecto-sp13_S_contig7687.18916.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=345bp
EEKKEEKKEEKEEEKKEDKREEKEEDKKEEKEEDKKEEKEDKKEVEEKVE
EKDEEKEDKKEDKKEDKKEDKKEDKKEKKEDKEKKEDKEKKEEEDKKEEE
KKEEDKKEEDKEKVEEKKEDKEDKKEDKEDKKEAEVASVPPVAAVSAPPS
PNSGVSAPPPPNTGRVSAPPSPNSGTVSAPPSPNSPKTVVAEEKKEEKKE
EKKEEKKEETNEEKKEDKKEEKVEIKGSGKVASQDEDQLTPLDMLVGPFM
VFATGMQKEAEFLEGELNQRVSQVTAEFQADRKNMEETLREDEAEEVRTR
LEKERKAVAASQEEAAAARKAQEQEKREAKEKLAQVEAELQRERE
back to top