prot_Ecto-sp13_S_contig7667.18896.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig7667.18896.1
Unique Name	prot_Ecto-sp13_S_contig7667.18896.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	100

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: A0A6H5JE16_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE16_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 4.610e-62
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ
Sbjct:  241 HQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 340

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: A0A812XMR1_SYMMI (AP1M1 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812XMR1_SYMMI)

HSP 1 Score: 190 bits (482), Expect = 1.350e-59
Identity = 90/100 (90.00%), Postives = 96/100 (96.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEF+LMTYRL THVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVP DVDSP+FKASIG+V Y PD+
Sbjct:   35 HQCVRLARFENDRTISFIPPDGEFELMTYRLNTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPQDVDSPSFKASIGTVTYFPDR 134

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: A0A7S2R9Z0_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2R9Z0_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.370e-58
Identity = 92/100 (92.00%), Postives = 99/100 (99.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEFDLMTYRL+THVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVP+DVDSP+FKASIG+V YLPD+
Sbjct:  253 HQCVRLARFENDRTISFIPPDGEFDLMTYRLSTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPSDVDSPSFKASIGTVVYLPDR 352

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: A0A7S0XCY6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCY6_9STRA)

HSP 1 Score: 185 bits (469), Expect = 9.630e-58
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEF+LM+YRL T VKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVP DVDSP+FKASIG+V Y PD+
Sbjct:   12 HQCVRLARFENDRTISFIPPDGEFELMSYRLNTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPRDVDSPSFKASIGTVVYYPDK 111

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: F0YHG2_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHG2_AURAN)

HSP 1 Score: 191 bits (485), Expect = 1.900e-57
Identity = 89/100 (89.00%), Postives = 99/100 (99.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEFDLMTYRL+THVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRS+ANNV+IIIPVP+DVDSP+FK+SIG+V YLPD+
Sbjct:  239 HQCVRLARFENDRTISFIPPDGEFDLMTYRLSTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSVANNVDIIIPVPHDVDSPSFKSSIGTVTYLPDR 338

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: A0A7R9Z8F8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z8F8_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.120e-56
Identity = 85/100 (85.00%), Postives = 94/100 (94.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEFDLMTYRL THVKPLIWVEAVVEPH  SRIEYMIK +SQFKSRS+ANNVEIIIPVP DVDSP+FK+S+G+V YLPD+
Sbjct:    1 HQCVRLARFENDRTISFIPPDGEFDLMTYRLNTHVKPLIWVEAVVEPHKGSRIEYMIKTRSQFKSRSVANNVEIIIPVPPDVDSPSFKSSVGNVTYLPDR 100

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: A0A6S8WNP8_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8WNP8_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.670e-56
Identity = 87/100 (87.00%), Postives = 99/100 (99.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEFDLMTYRLTT VKPLIWVEAVVEPHSHSRIEYM+KAKSQFKSRS+AN+V+I+IPVP+DVDSP+FK+SIGSV+YLPD+
Sbjct:  229 HQCVRLARFENDRTISFIPPDGEFDLMTYRLTTQVKPLIWVEAVVEPHSHSRIEYMVKAKSQFKSRSVANSVDIVIPVPHDVDSPSFKSSIGSVSYLPDR 328

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: A0A7S4A236_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A236_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.110e-56
Identity = 87/100 (87.00%), Postives = 99/100 (99.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEFDLMTYRLTT VKPLIWVEAVVEPHSHSRIEYM+KAKSQFKSRS+AN+V+I+IPVP+DVDSP+FK+SIGSV+YLPD+
Sbjct:  239 HQCVRLARFENDRTISFIPPDGEFDLMTYRLTTQVKPLIWVEAVVEPHSHSRIEYMVKAKSQFKSRSVANSVDIVIPVPHDVDSPSFKSSIGSVSYLPDR 338

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: F0YMC8_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMC8_AURAN)

HSP 1 Score: 187 bits (476), Expect = 2.380e-56
Identity = 87/100 (87.00%), Postives = 97/100 (97.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEFDLMTYRLTT VKPLIWVEAVVEPHSHSRIEYM+KAKSQFKSRS+AN V+I+IPVP+DVDSP+FK+SIGSV YLPD+
Sbjct:  215 HQCVRLARFENDRTISFIPPDGEFDLMTYRLTTQVKPLIWVEAVVEPHSHSRIEYMVKAKSQFKSRSVANGVDIVIPVPHDVDSPSFKSSIGSVTYLPDR 314

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BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Match: W7U403_9STRA (Ap-1 complex subunit mu-1-like isoform 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U403_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.650e-56
Identity = 89/100 (89.00%), Postives = 98/100 (98.00%), Query Frame = 0

Query:    1 NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ 100
            ++CVRLARFENDRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNV+IIIPVP+DVD+P+FKASIG+V YLPD+
Sbjct:  242 HQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDK 341

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7667.18896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JE16_9PHAE	4.610e-62	98.00	MHD domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A812XMR1_SYMMI	1.350e-59	90.00	AP1M1 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A8...	[more]
A0A7S2R9Z0_9STRA	2.370e-58	92.00	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
A0A7S0XCY6_9STRA	9.630e-58	88.00	Hypothetical protein n=1 Tax=Chromulina nebulosa T...	[more]
F0YHG2_AURAN	1.900e-57	89.00	MHD domain-containing protein n=1 Tax=Aureococcus ...	[more]
A0A7R9Z8F8_9STRA	1.120e-56	85.00	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A6S8WNP8_9STRA	1.670e-56	87.00	Hypothetical protein n=3 Tax=Pelagomonas calceolat...	[more]
A0A7S4A236_9STRA	2.110e-56	87.00	Hypothetical protein n=3 Tax=Pelagomonas calceolat...	[more]
F0YMC8_AURAN	2.380e-56	87.00	MHD domain-containing protein n=1 Tax=Aureococcus ...	[more]
W7U403_9STRA	2.650e-56	89.00	Ap-1 complex subunit mu-1-like isoform 1 n=2 Tax=M...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.40.1170		coord: 37..99 e-value: 8.4E-36 score: 125.7
None	No IPR available	GENE3D	2.60.40.1170		coord: 2..36 e-value: 8.4E-36 score: 125.7
None	No IPR available	PANTHER	PTHR10529	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	coord: 2..100
None	No IPR available	PANTHER	PTHR10529:SF262	ADAPTOR PROTEIN COMPLEX 1, MU SUBUNIT	coord: 2..100
IPR028565	Mu homology domain	PFAM	PF00928	Adap_comp_sub	coord: 2..98 e-value: 3.3E-29 score: 102.1
IPR028565	Mu homology domain	PROSITE	PS51072	MHD	coord: 1..100 score: 17.843
IPR018240	Clathrin adaptor, mu subunit, conserved site	PROSITE	PS00991	CLAT_ADAPTOR_M_2	coord: 15..29
IPR036168	AP-2 complex subunit mu, C-terminal superfamily	SUPERFAMILY	49447	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	coord: 2..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7667	contig	Ecto-sp13_S_contig7667:993..1915 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7667.18896.1	mRNA_Ecto-sp13_S_contig7667.18896.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig7667 993..1915 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig7667.18896.1 ID=prot_Ecto-sp13_S_contig7667.18896.1|Name=mRNA_Ecto-sp13_S_contig7667.18896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
NRCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSH
SRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028565	MHD
IPR018240	Clathrin_mu_CS
IPR036168	AP2_Mu_C_sf