prot_Ecto-sp13_S_contig7654.18878.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7654.18878.1
Unique Nameprot_Ecto-sp13_S_contig7654.18878.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length121
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7654.18878.1 vs. uniprot
Match: D8LFQ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ3_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.600e-14
Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 0 
Query:    1 MAAALDGRDSTERQRAEGGLRRLEVAAKAGNVDEFLRVCGELGLRVQINTDHPAFVSGADLDRIAPCRVG 70
            MAA LDG +STER+RAE GLRRL VAAKAG+V  FL VCGE+ + + I+T HPAF + A   R  P  VG
Sbjct:  551 MAAVLDGPESTERRRAEEGLRRLRVAAKAGDVVAFLGVCGEIDVSIHIDTTHPAFANNAG--RTEPLLVG 618
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7654.18878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFQ3_ECTSI1.600e-1460.00Ubiquitin carboxyl-terminal hydrolase family prote... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7654contigEcto-sp13_S_contig7654:1463..1825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7654.18878.1mRNA_Ecto-sp13_S_contig7654.18878.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7654 1191..5266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7654.18878.1 ID=prot_Ecto-sp13_S_contig7654.18878.1|Name=mRNA_Ecto-sp13_S_contig7654.18878.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=121bp
MAAALDGRDSTERQRAEGGLRRLEVAAKAGNVDEFLRVCGELGLRVQINT
DHPAFVSGADLDRIAPCRVGGVPHVRRVTVLLPGLPCTHRQATAHWCASV
SLRWRHEWRYRRPQQERSLL*
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