prot_Ecto-sp13_S_contig7645.18863.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7645.18863.1
Unique Nameprot_Ecto-sp13_S_contig7645.18863.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length605
Homology
BLAST of mRNA_Ecto-sp13_S_contig7645.18863.1 vs. uniprot
Match: A0A6H5JS20_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE)

HSP 1 Score: 778 bits (2010), Expect = 1.920e-275
Identity = 444/608 (73.03%), Postives = 452/608 (74.34%), Query Frame = 0
Query:   96 KNTEYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEDRRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLRRASEVAGGKLGVGGAGSAGPNGGGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSMARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRAPPGRQLPSTGPQDGGPPLAGSFLRPSGSGGASAAVPAGAAGSVDGSQWSLRGMLPAWSREQPSEPGDGS---------------------------------------------------------------------------------------------------TLRQAPGSSFEGGGSSRGSSAWMPDMSRGSGTSTSSSLPGNLLGAAGAVPTSPTPREELTGSGDTSNGNSGRGPTDRPARGELFWAAGSGGENAVFPGSSGGLSMAASPAWPSEQSNAPLGGAAGAEGSARAGESSGGRNLAVPTFSSSLDTGARFTSEVGRSGGTFIGTTTLEESGXXXXXXXXXXXXXENPFA 604
            +NTEYEYEVSVPATVDTGSRV GVTWYEVHTMRKADSKGTLVHRRFRDF+ALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVE+RRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKL+RASEVAGGKLGVGGAGSAGPNG GGAPPVITSVLGNGRSPPGVC GDRLFKVNGDSTELMSLEAAWSS+ARATRPVMLHFLGPILRMDSTLAPLPEAFLRHR PPGRQLPSTGPQDGGP LAGSFLRPSGSGGASA           G QW LRGMLPAWSREQPS+PGDGS                                                                                                   TLRQAPGSSF          AWMPD SRGSGTSTSSS PGN+LGAAGAVPT PT REEL GSG TSNGNS RGPTDRPARG LF AAGSGGENA FPGSSGG SMAASPAWPSEQSNAPLGGAAGAEG  R GESSGGRNLAVPTFSSSLDTGARFTSEVGRSGGTF+GTTTL ES              ENPFA
Sbjct:  116 QNTEYEYEVSVPATVDTGSRVRGVTWYEVHTMRKADSKGTLVHRRFRDFHALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCSGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQLPSTGPQDGGPSLAGSFLRPSGSGGASAXXXXXXXXXXXGGQWRLRGMLPAWSREQPSKPGDGSALAPGGSAAPGREWNPHENPRTRIGNGVGRGGAVGPFGNGTGAAAAGRTNPANSSLFGGDATAGASGGGMGGAAKKESLFDSWRSPRAAXXXXXXXXXGTLRQAPGSSFGXXXXXXXXXAWMPDTSRGSGTSTSSSPPGNMLGAAGAVPTPPTSREELAGSGSTSNGNSVRGPTDRPARGGLFSAAGSGGENAGFPGSSGGSSMAASPAWPSEQSNAPLGGAAGAEGRVRGGESSGGRNLAVPTFSSSLDTGARFTSEVGRSGGTFVGTTTLGESDDHHGFEEEDGEEEENPFA 723          
BLAST of mRNA_Ecto-sp13_S_contig7645.18863.1 vs. uniprot
Match: D8LMZ7_ECTSI (PX domain containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ7_ECTSI)

HSP 1 Score: 590 bits (1521), Expect = 6.110e-207
Identity = 301/313 (96.17%), Postives = 307/313 (98.08%), Query Frame = 0
Query:   96 KNTEYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEDRRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLRRASEVAGGKLGVGGAGSAGPNGGGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSMARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRAPPGRQLPSTGPQDGGPPLAGSFLRPSGSGGASAAVPAGAAGSVDGSQWSLRGMLPAWSREQPSEPGDG 408
            +NT+YEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVE+RRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKL+RASEVAGGKLGVGGAGSAGPNG GGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSS+ARATRPVMLHFLGPILRMDSTLAPLPEAFLRHR PPGRQLPST PQDGGPPLAGSFLRPSGSGGASAA PAGAAG VDG QWSLRGMLPAWSREQPS+PGDG
Sbjct:   43 QNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQLPSTAPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDG 355          
BLAST of mRNA_Ecto-sp13_S_contig7645.18863.1 vs. uniprot
Match: A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.070e-28
Identity = 88/244 (36.07%), Postives = 122/244 (50.00%), Query Frame = 0
Query:   97 NTEYEYEVSVPATVDT----GSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEDRRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLRRASEVAGGKLGVGGAGSAGPNGGGGAPPVITSVLGNGRSPP---------------GVCPGDRLFKVNGDSTELMSLEAAWSSMARATRPVMLHFLGPI 321
            N E+E++V +P++V      G     VTWY +   R  D   T VHRR+ DF  L +Q + +MKGHHL  SLP  P K   L  +  D +F+E RR  L+ YL+TLL++PHV  LD+TRAFLG+VG+LRE               R+  V+GG  G GGAG A          +   V G+G S P               GV  GD L +V G + E  SL      + +  +P ++H +  +
Sbjct:  194 NQEHEFDVRIPSSVQACAYKGGDQPNVTWYLLRVRRLRDGACTEVHRRYTDFEMLHQQCDGMMKGHHLSDSLPPLPCKSPLL--DRSDAAFIESRRAELQAYLRTLLRVPHVGGLDTTRAFLGLVGDLRE---------------RSFVVSGGAAGGGGAGFA----------LTADVQGDGLSDPHGFLTVAQLLRGAPAGVAVGDMLLRVGGATIEGKSLLQVTERLEKMPQPYLVHLISAV 410          
BLAST of mRNA_Ecto-sp13_S_contig7645.18863.1 vs. uniprot
Match: A0A4D9CLT8_9STRA (PX domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLT8_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.260e-26
Identity = 80/216 (37.04%), Postives = 112/216 (51.85%), Query Frame = 0
Query:  114 SRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEDRRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLRRASEVAGGKLGVGGAGSAGPNGGGGAPPVITSV--LGNGRSPPGVCPGDRLFKVNGDS-TELMSLEAAWSSMARATRPVMLHFLGPILRMDS 326
            S+   VTWYE+   R +D   TLVHRR+R+F  L EQV +  KGHHLRSSLP  PG++ KL  +H D +FVE+RR  LE  L  LL +PHV  +   + FLG    L+E SV +  ++LG  + R + V    +                  V+T V   G G     V  GD L KV G+  ++    +     ++R  RP+++HFL  + R  S
Sbjct:  126 SKEKSVTWYELTVTRGSDGARTLVHRRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFLGFFDRLKEHSVIFTQRDLGLSITR-TVVPEESI------------------VVTRVKEAGPGGQKSRVMVGDTLSKVGGEPVSKFGGFDGVAFQVSRGLRPIVIHFLEAVDRNPS 322          
BLAST of mRNA_Ecto-sp13_S_contig7645.18863.1 vs. uniprot
Match: A0A7S3M5K7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5K7_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.490e-24
Identity = 72/213 (33.80%), Postives = 110/213 (51.64%), Query Frame = 0
Query:  109 TVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEDRRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLRRASEVAGGKLGVGGAGSAGPNGGGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSMARATRPVMLHFLGPI 321
            TVD  S    + WY V T R  D   + VHRRFR+F  L  Q++  MKGHH+R  LP  P K  K +T+H D SF++DR   LE++L  +  +PHV  +   +AFLG++  +RE+S++++   LG  L                      G  G+ P +  ++       GV PGD+L +VNG   +  +  AA + +    RP+++HF+  I
Sbjct:  133 TVDDQSEFQ-IAWYVVKTTRITDGATSTVHRRFREFAELNSQIKQNMKGHHMRDVLPALPEKPLKQFTDHHDPSFIQDRCIKLERFLIAMTSIPHVGNMVCMKAFLGIMDQVREYSLAFQAPTLGLSLLPRDR----------------QGEPGSSPCVVGMIQKPEVCQGVLPGDQLSRVNGVPLQGATFAAAVARIKSTPRPMIVHFIQVI 328          
BLAST of mRNA_Ecto-sp13_S_contig7645.18863.1 vs. uniprot
Match: A0A6T9YST3_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A6T9YST3_BIGNA)

HSP 1 Score: 59.7 bits (143), Expect = 3.280e-6
Identity = 41/139 (29.50%), Postives = 62/139 (44.60%), Query Frame = 0
Query:  106 VPATVDTGSRVSGVTWYEVHTMR--KADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEDRRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLRRASEV 242
            +P  +   S  S + +Y+V          +  ++ +RF DF  L   V S   GH L S+LP  P K  KLWT+H + SFV+ RR  L +YL  L  +  V        F        +F V  E  E  +  + A+++
Sbjct:  116 LPCAMIRKSGESKIVYYKVEVTNGDPLQKETYVLKKRFSDFEKLDHLVRSSFSGHQLMSNLPPKPSKSVKLWTDHLEKSFVQQRRGELNRYLTKLFNVKKVCANPDFANFFRKPTEEDKFHVDEETDEPDSSKKEAAKI 254          
BLAST of mRNA_Ecto-sp13_S_contig7645.18863.1 vs. uniprot
Match: A0A7S0CUY1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CUY1_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 8.230e-6
Identity = 27/78 (34.62%), Postives = 46/78 (58.97%), Query Frame = 0
Query:  139 RRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEDRRKALEQYLKTLLQLPHVSTLDSTRAFLGM 216
            +RF  FY    ++    K    +  LP+FP + SK++T+H D  F+E RRK L++++K L ++P +S  +    FLG+
Sbjct:   67 KRFNAFYGFYRKLSKDFK----KCGLPKFPPRHSKVFTDHNDPVFIEQRRKKLDKFMKELFKIPGMSNQECVLDFLGI 140          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7645.18863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JS20_9PHAE1.920e-27573.03PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LMZ7_ECTSI6.110e-20796.17PX domain containing protein (Partial) (Fragment) ... [more]
A0A835YSM5_9STRA2.070e-2836.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CLT8_9STRA4.260e-2637.04PX domain-containing protein n=3 Tax=Monodopsidace... [more]
A0A7S3M5K7_9STRA1.490e-2433.80Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6T9YST3_BIGNA3.280e-629.50Hypothetical protein n=1 Tax=Bigelowiella natans T... [more]
A0A7S0CUY1_9EUKA8.230e-634.62Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 96..217
e-value: 7.1E-7
score: 38.8
IPR001683Phox homologous domainPFAMPF00787PXcoord: 110..214
e-value: 6.4E-14
score: 51.9
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 100..221
score: 14.746
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 86..217
e-value: 2.7E-19
score: 71.2
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 96..214
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 261..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7645contigEcto-sp13_S_contig7645:781..5905 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7645.18863.1mRNA_Ecto-sp13_S_contig7645.18863.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7645 781..5905 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7645.18863.1 ID=prot_Ecto-sp13_S_contig7645.18863.1|Name=mRNA_Ecto-sp13_S_contig7645.18863.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=605bp
FSLPVFVSPPRQQAFPFLCLFCFAPRKQTFPFLPLFVCHPSKTNIFFSAW
FCVFPQKQTFPFSPPVFVSPLETTPFFLGLFLCHPSKTNLSSLSAKNTEY
EYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQ
VESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEDRRKALEQYLKTLLQ
LPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLRRASEVAGGKLGVG
GAGSAGPNGGGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLE
AAWSSMARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRAPPGRQLPSTG
PQDGGPPLAGSFLRPSGSGGASAAVPAGAAGSVDGSQWSLRGMLPAWSRE
QPSEPGDGSTLRQAPGSSFEGGGSSRGSSAWMPDMSRGSGTSTSSSLPGN
LLGAAGAVPTSPTPREELTGSGDTSNGNSGRGPTDRPARGELFWAAGSGG
ENAVFPGSSGGLSMAASPAWPSEQSNAPLGGAAGAEGSARAGESSGGRNL
AVPTFSSSLDTGARFTSEVGRSGGTFIGTTTLEESGDHHGDEEDDGEEEE
NPFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR036871PX_dom_sf
IPR036034PDZ_sf