prot_Ecto-sp13_S_contig1224.1885.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1224.1885.1
Unique Nameprot_Ecto-sp13_S_contig1224.1885.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length46
Homology
BLAST of mRNA_Ecto-sp13_S_contig1224.1885.1 vs. uniprot
Match: D8LPX5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPX5_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.380e-21
Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 AGGQVLQHAGGKAGEPGEDVRYNKEEPLNPFFVVYGTRKAGAPAV 45
            AGGQVLQHAGGKAGEPGEDVRYNKE+PLNPFFVVYG+RKA APAV
Sbjct:  212 AGGQVLQHAGGKAGEPGEDVRYNKEDPLNPFFVVYGSRKAAAPAV 256          
BLAST of mRNA_Ecto-sp13_S_contig1224.1885.1 vs. uniprot
Match: F0XWS2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWS2_AURAN)

HSP 1 Score: 56.2 bits (134), Expect = 4.580e-8
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 AGGQVLQHAGGKAGEPGEDVRYNKEEPLNPFFVV 34
            AGG+VLQHAGGK  EPG+ V YNK E LNPFFVV
Sbjct:  235 AGGEVLQHAGGKDCEPGKPVAYNKPEALNPFFVV 268          
BLAST of mRNA_Ecto-sp13_S_contig1224.1885.1 vs. uniprot
Match: A0A0G4F0W4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F0W4_VITBC)

HSP 1 Score: 54.7 bits (130), Expect = 1.610e-7
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 AGGQVLQHAGGKAGEPGEDVRYNKEEPLNPFFVVYGTR 38
            AGG+V+Q AGG   E GE +RYNKE+ LNPFFVVYG +
Sbjct:  221 AGGRVVQAAGGAPCEEGEALRYNKEDQLNPFFVVYGNQ 258          
BLAST of mRNA_Ecto-sp13_S_contig1224.1885.1 vs. uniprot
Match: A0A0G4ENA2_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ENA2_VITBC)

HSP 1 Score: 54.3 bits (129), Expect = 2.720e-7
Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    1 AGGQVLQHAGGKAGEPGEDVRYNKEEPLNPFFVVYGTR 38
            AGG+V+Q  GG   E GE VRYNKE  LNPFFVVYG +
Sbjct:  373 AGGRVVQATGGSPCEEGEPVRYNKENTLNPFFVVYGNQ 410          
BLAST of mRNA_Ecto-sp13_S_contig1224.1885.1 vs. uniprot
Match: A0A7S2USH2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USH2_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.150e-5
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 AGGQVLQHAGGKAGEPGEDVRYNKEEPLNPFFVVYGTRKAGA 42
            AGG+VLQ+ GGK  +  + + YNK + LNP+FVVYG RKA A
Sbjct:  237 AGGEVLQYQGGKDCDHLKPLVYNKPDVLNPWFVVYGKRKAAA 278          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1224.1885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPX5_ECTSI1.380e-2193.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0XWS2_AURAN4.580e-876.47Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A0G4F0W4_VITBC1.610e-765.79Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0G4ENA2_VITBC2.720e-765.79Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A7S2USH2_9STRA1.150e-557.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1224contigEcto-sp13_S_contig1224:18147..18284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1224.1885.1mRNA_Ecto-sp13_S_contig1224.1885.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1224 18147..18284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1224.1885.1 ID=prot_Ecto-sp13_S_contig1224.1885.1|Name=mRNA_Ecto-sp13_S_contig1224.1885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=46bp
AGGQVLQHAGGKAGEPGEDVRYNKEEPLNPFFVVYGTRKAGAPAV*
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