prot_Ecto-sp13_S_contig1224.1883.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1224.1883.1
Unique Name	prot_Ecto-sp13_S_contig1224.1883.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	133

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1224.1883.1 vs. uniprot
Match: D8LPX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX8_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 5.500e-79
Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 0

Query:    1 MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDRRDRHPIVPGDIPALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPRHLYRELQDCVTQDAMLLSPLPRRRQQRGHRHRH 127
            MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDRRDRHP+VPGDIPALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPR+LYRELQDCVTQDAMLLSPLPRRRQQ GH H H
Sbjct:    1 MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDRRDRHPVVPGDIPALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPRYLYRELQDCVTQDAMLLSPLPRRRQQHGHHHLH 127

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BLAST of mRNA_Ecto-sp13_S_contig1224.1883.1 vs. uniprot
Match: A0A6H5KJF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF2_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 3.450e-55
Identity = 102/127 (80.31%), Postives = 104/127 (81.89%), Query Frame = 0

Query:    1 MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDRRDRHPIVPGDIPALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPRHLYRELQDCVTQDAMLLSPLPRRRQQRGHRHRH 127
            MKNRVMHLEAALVRSELDLCR                   +AATDRRDRHP+VPGDIPALYHALEGSVVLLQIASEKML LEHTIAKHREAMPRHLYRELQDCVTQDAMLLSPLPRRRQQ GH H H
Sbjct:  631 MKNRVMHLEAALVRSELDLCRXXXXXXXXXXXXXXXXXXXEAATDRRDRHPVVPGDIPALYHALEGSVVLLQIASEKMLCLEHTIAKHREAMPRHLYRELQDCVTQDAMLLSPLPRRRQQHGHYHVH 757

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1224.1883.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1224.1883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LPX8_ECTSI	5.500e-79	96.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KJF2_9PHAE	3.450e-55	80.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..46
None	No IPR available	COILS	Coil	Coil	coord: 71..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1224	contig	Ecto-sp13_S_contig1224:1152..3898 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1224.1883.1	mRNA_Ecto-sp13_S_contig1224.1883.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1224 1152..3898 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1224.1883.1 ID=prot_Ecto-sp13_S_contig1224.1883.1|Name=mRNA_Ecto-sp13_S_contig1224.1883.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDRRDRH
PIVPGDIPALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPRHLYREL
QDCVTQDAMLLSPLPRRRQQRGHRHRHLHPQR*