prot_Ecto-sp13_S_contig7598.18801.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7598.18801.1
Unique Nameprot_Ecto-sp13_S_contig7598.18801.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: A0A6H5K009_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K009_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.160e-53
Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 0
Query:    1 MQSPSKSLTSQAGGAAGSRVLHFGLAGTRGAEAPALVDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRD 93
            MQSPSK+L SQAGGA GSRVLHFGLAGTRGAEAPALVDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNH LDWTVMFLNRD
Sbjct:    1 MQSPSKNLASQAGGAGGSRVLHFGLAGTRGAEAPALVDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHPLDWTVMFLNRD 93          
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: A0A836CED8_9STRA (Docking domain of Afi1 for Arf3 in vesicle trafficking-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED8_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.120e-27
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 0
Query:   32 EAPALVDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNR 92
            + P LVDYILLAEFDID+GST+RH YP  VPG  DDWFAE+MLPEGAHNH+LDWTVMFLN+
Sbjct:   26 DCPRLVDYILLAEFDIDTGSTLRHKYPGPVPGYRDDWFAEYMLPEGAHNHSLDWTVMFLNK 86          
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: A0A482RWL4_9ARCH (UDENN domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWL4_9ARCH)

HSP 1 Score: 99.0 bits (245), Expect = 9.540e-23
Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 0
Query:   29 RGAEAPALVDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNR 92
            RG     LVD++LLAEFDID+GST+RH YPS++PG + DWFAEHMLPEG HN   D+T +FLNR
Sbjct:   23 RGENTDQLVDFVLLAEFDIDTGSTLRHQYPSNIPGYNADWFAEHMLPEGVHNRTTDYTYIFLNR 86          
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: A0A7S3GW46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GW46_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.420e-22
Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 0
Query:   36 LVDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRD 93
            LVDY++LAEFDID+GSTVRH YP+++P    DWFAE MLPEGAHN  LD+  +FLNRD
Sbjct:   19 LVDYVVLAEFDIDTGSTVRHQYPNNIPDYKADWFAEFMLPEGAHNRDLDFNYIFLNRD 76          
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: D7G403_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G403_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.970e-22
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0
Query:   51 STVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRD 93
            STVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRD
Sbjct:   15 STVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRD 57          
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: A0A7S2GUJ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUJ0_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.220e-21
Identity = 41/58 (70.69%), Postives = 46/58 (79.31%), Query Frame = 0
Query:   36 LVDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRD 93
            LV++ILLAEFDID+GST+RH  P  V GV DDWFAE MLPEGAHN   DWT+ FL RD
Sbjct:   38 LVEHILLAEFDIDTGSTLRHVLPGPVAGVPDDWFAEMMLPEGAHNRDSDWTLSFLRRD 95          
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: A0A7S0SW50_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SW50_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.750e-18
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   36 LVDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRD 93
            LVDY+LLAEFDID+GST+RH YP+ + G  DD+FAE+MLP+GAHN   D+  + LNRD
Sbjct:   23 LVDYVLLAEFDIDTGSTLRHKYPNEIIGYKDDYFAENMLPDGAHNRDKDYNYILLNRD 80          
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: L8GKC3_ACACA (Spindle pole body interacting protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GKC3_ACACA)

HSP 1 Score: 78.2 bits (191), Expect = 7.400e-15
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:   37 VDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRD 93
            +++ILLAEFDID GST++H  P  +P  +DD+ A+ MLP+GA N   DWT+ FLNR+
Sbjct:    9 IEHILLAEFDIDKGSTLKHQIPGPIPNYADDFLADRMLPDGAQNQEWDWTLFFLNRE 65          
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: A0A5D6XH91_9STRA (UDENN domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH91_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.480e-14
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0
Query:   24 GLAGTRGAEAPALVDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNR 92
            GL    G+ A  + + +L AEFDID GST+R ++P+++P  S ++FA+ MLPEGAHN   D TV FLNR
Sbjct:    3 GLMSVAGSAAARVAEVVLFAEFDIDKGSTLRESFPTALPHYSPEFFADVMLPEGAHNRTADSTVFFLNR 71          
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Match: A0A5C5FTP3_9BASI (Mesa protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5FTP3_9BASI)

HSP 1 Score: 76.3 bits (186), Expect = 3.580e-14
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   37 VDYILLAEFDIDSGSTVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNR 92
            VDY+LLAEFDID GS VRH YP+   G  +   AEHMLP+GAH+   DWTV +LN+
Sbjct:   31 VDYVLLAEFDIDQGSLVRHQYPAPT-GTDEHLLAEHMLPDGAHDRPEDWTVFYLNQ 85          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7598.18801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K009_9PHAE1.160e-5395.70UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CED8_9STRA7.120e-2778.69Docking domain of Afi1 for Arf3 in vesicle traffic... [more]
A0A482RWL4_9ARCH9.540e-2365.63UDENN domain-containing protein n=1 Tax=archaeon T... [more]
A0A7S3GW46_9STRA1.420e-2268.97Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
D7G403_ECTSI1.970e-22100.00UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2GUJ0_9STRA1.220e-2170.69Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S0SW50_9STRA4.750e-1863.79Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
L8GKC3_ACACA7.400e-1554.39Spindle pole body interacting protein n=1 Tax=Acan... [more]
A0A5D6XH91_9STRA3.480e-1450.72UDENN domain-containing protein n=1 Tax=Pythium br... [more]
A0A5C5FTP3_9BASI3.580e-1460.71Mesa protein n=1 Tax=Rhodotorula diobovata TaxID=5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012860Arf3-interacting protein 1, N-terminal domainPFAMPF07792Afi1coord: 39..93
e-value: 2.4E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR28245FAMILY NOT NAMEDcoord: 33..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7598contigEcto-sp13_S_contig7598:3700..5379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7598.18801.1mRNA_Ecto-sp13_S_contig7598.18801.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7598 3700..5498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7598.18801.1 ID=prot_Ecto-sp13_S_contig7598.18801.1|Name=mRNA_Ecto-sp13_S_contig7598.18801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
MQSPSKSLTSQAGGAAGSRVLHFGLAGTRGAEAPALVDYILLAEFDIDSG
STVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012860Afi1_N