prot_Ecto-sp13_S_contig7585.18786.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7585.18786.1
Unique Nameprot_Ecto-sp13_S_contig7585.18786.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length41
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7585.18786.1 vs. uniprot
Match: D7FH38_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH38_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 5.240e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0 
Query:    1 TPLHRAVLGGHSEVARVLIKAGADKDARTGGSGA 34
            TPLHRAVLGGHSEVARVLIKAGADKDARTGGSGA
Sbjct:  125 TPLHRAVLGGHSEVARVLIKAGADKDARTGGSGA 158
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7585.18786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH38_ECTSI5.240e-12100.00Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..41
e-value: 2.8E-12
score: 48.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..41
NoneNo IPR availablePFAMPF13857Ank_5coord: 1..40
e-value: 7.6E-8
score: 32.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..30
score: 12.983
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..41
score: 19.014

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7585contigEcto-sp13_S_contig7585:7007..7129 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7585.18786.1mRNA_Ecto-sp13_S_contig7585.18786.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7585 7007..7129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7585.18786.1 ID=prot_Ecto-sp13_S_contig7585.18786.1|Name=mRNA_Ecto-sp13_S_contig7585.18786.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=41bp
TPLHRAVLGGHSEVARVLIKAGADKDARTGGSGATPLHLAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom