prot_Ecto-sp13_S_contig7572.18773.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig7572.18773.1
Unique Name	prot_Ecto-sp13_S_contig7572.18773.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	146

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7572.18773.1 vs. uniprot
Match: D7FR82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR82_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 6.610e-35
Identity = 74/95 (77.89%), Postives = 76/95 (80.00%), Query Frame = 0

Query:    1 MQQNAPEAAASAQYKGSSGSTTWANKAFECLRCVGYVAAWTLLLLC--TELGHHESFAGILVVVLAVPIVTFRSRCEITWRGLMLVFSVTLLAII 93
            MQQ   EA  SAQ  GSSGSTTWA+KAFECLRCV  VAAWTLLLLC  T LGHHESF GIL VVL V IV FR RCE TWRGLMLVFSVTLLAI+
Sbjct:  317 MQQTVREAVTSAQDNGSSGSTTWADKAFECLRCVCCVAAWTLLLLCSFTVLGHHESFVGILAVVLVVTIVAFRIRCERTWRGLMLVFSVTLLAIM 411

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BLAST of mRNA_Ecto-sp13_S_contig7572.18773.1 vs. uniprot
Match: A0A6H5JQP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP3_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.340e-33
Identity = 72/95 (75.79%), Postives = 76/95 (80.00%), Query Frame = 0

Query:    1 MQQNAPEAAASAQYKGSSGSTTWANKAFECLRCVGYVAAWTLLLLC--TELGHHESFAGILVVVLAVPIVTFRSRCEITWRGLMLVFSVTLLAII 93
            MQQ   EA ASAQ  GSSGSTTWANKAF CLRCV  VAAWTLLLLC  T LGH ESF+GIL VV  V +V FR+RCE TWRGLMLVFSVTLLAI+
Sbjct:  319 MQQTVREAVASAQDNGSSGSTTWANKAFVCLRCVCCVAAWTLLLLCSFTVLGHQESFSGILAVVFVVTMVAFRTRCERTWRGLMLVFSVTLLAIM 413

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7572.18773.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7572.18773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FR82_ECTSI	6.610e-35	77.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JQP3_9PHAE	1.340e-33	75.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 49..69
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 76..93
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 94..145
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 70..75
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..48

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7572	contig	Ecto-sp13_S_contig7572:6168..6605 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7572.18773.1	mRNA_Ecto-sp13_S_contig7572.18773.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig7572 3681..6639 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig7572.18773.1 ID=prot_Ecto-sp13_S_contig7572.18773.1|Name=mRNA_Ecto-sp13_S_contig7572.18773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=146bp
MQQNAPEAAASAQYKGSSGSTTWANKAFECLRCVGYVAAWTLLLLCTELG
HHESFAGILVVVLAVPIVTFRSRCEITWRGLMLVFSVTLLAIINSQGSLC
EALSHFRGFQPSGVQRRRRPLSVAPLHPEVFLSFHPELSRFLGTP*