mRNA_Ecto-sp13_S_contig7555.18749.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: D7FJB1_ECTSI (Fucokinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB1_ECTSI) HSP 1 Score: 340 bits (873), Expect = 3.030e-110 Identity = 188/244 (77.05%), Postives = 192/244 (78.69%), Query Frame = 1
Query: 1 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDG--------------------GRGHAAISSKATPPSYRALHRKRRIPTNQVPSET--VAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 666
PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSG SSGSLEPGTLVVTACDVMLL+PPEVAATADWSFD+QSGAAGGVAGLAIAADAAKY NHGVYCLDG R A S P A + N PS VAIDSGVVVFSGAAT+ALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG
Sbjct: 113 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGGSSGSLEPGTLVVTACDVMLLVPPEVAATADWSFDQQSGAAGGVAGLAIAADAAKYASNHGVYCLDGGXXXXXQESHGITGVRKYLQKPSREEAEASGAFLNPGGMAAPKNESGNPNHDPSANPEVAIDSGVVVFSGAATRALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 356
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A6H5LE27_9PHAE (FK protein ( GFPPprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE27_9PHAE) HSP 1 Score: 329 bits (844), Expect = 6.690e-101 Identity = 184/244 (75.41%), Postives = 187/244 (76.64%), Query Frame = 1
Query: 1 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDG--------------------GRGHAAISSKATPPSYRALHRKRRIPTNQVPSET--VAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 666
PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSG SSGSLEPGTLVVTACDVMLLIPPEVAATADWSFD QSGAAGGVAGLAIAADAAKY +HGVYCLDG R A S P N P+ VAIDSGVVVFSGAAT ALTSLA SETFKGCTSRGVAGGASALRLELYSD+LLALRTG
Sbjct: 113 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGGSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDNQSGAAGGVAGLAIAADAAKYASHHGVYCLDGGXXXXXQKSHGIKGVRKYLQKPSREEAETSGAFINPGSMVTPNNESGNPNHDPNANPEVAIDSGVVVFSGAATWALTSLALSETFKGCTSRGVAGGASALRLELYSDILLALRTG 356
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A0G4EMB4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EMB4_VITBC) HSP 1 Score: 117 bits (294), Expect = 9.920e-27 Identity = 85/221 (38.46%), Postives = 114/221 (51.58%), Query Frame = 1
Query: 1 PQGLAAARVLLV-HSGGDSQRSPTQCVCGKAWSALNSCGDSGSGR-CNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAAISSKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLAL 657
P G A +LL+ HSGGDSQRSP Q VCGKA++ LN G+G + P DLLLE L RLF+G ++ G LVV+ DV+L +P D+ GV G+A DA +Y HGVY +G ++ P+ + + +P +A+D+GVV F TQ L +A S GCT G+ G LR ELYSD++LAL
Sbjct: 68 PGGPPADELLLIIHSGGDSQRSPVQSVCGKAFATLNCQQQGGTGPFLSAPFDLLLESLCRLFAG-----VKKGGLVVSCSDVVLAVP---------HADEGMWGGSGVVGVAAEVDA-RYGPRHGVYVPTTEG-----RVAQFLQKPTEAVMTSEGA----SLPPGKIAVDTGVVYFDTTTTQRLVEMAQSPVLAGCTEAGLKEGQPPLRTELYSDIMLAL 264
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: W7TJC8_9STRA (L-fucose kinase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJC8_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.460e-26 Identity = 94/242 (38.84%), Postives = 121/242 (50.00%), Query Frame = 1
Query: 25 VLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAAISSKATPPSYRALHRKRRIPTNQV-------------------PSETVAIDSGVVVFSGAATQALTSL--AHSETFKGCTSRGVAGGASA-------LRLELYSDLLLALRTG 666
+L+VHSGGDSQRSPT VCGKAWS LNS G NTP+DLLLE ++LF+G + G LVV + DV+L++PP DW+ + GV GLA + AA NHGVY +AI+ R++ T +V V ID+GV+ F T+ L SL AH+ F+ C SRG G +A LRLELY+D+LLAL G
Sbjct: 102 ILMVHSGGDSQRSPTNSVCGKAWSCLNSHRKEDGGS-NTPIDLLLEQFTQLFAG----GVPSGALVVASSDVLLVLPPW---PVDWASQR------GVVGLAASVPAALGP-NHGVYVT------ATSAIACARRGRDVEERSEDRKVMTQRVMQYLQKASLVDLTAKGAVSTEGNVLIDTGVLFFCPQITRELMSLPKAHA-VFRRCCSRGETEGGTAEGRVEAALRLELYTDMLLALSDG 321
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A196SM10_BLAHN (L-fucose kinase-like protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SM10_BLAHN) HSP 1 Score: 114 bits (284), Expect = 2.120e-25 Identity = 85/220 (38.64%), Postives = 113/220 (51.36%), Query Frame = 1
Query: 1 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAA-ISSKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLAL 657
P LA ++++++HSGGDS+RSP Q +CGKAWSA+NS + TP D LL++L++ F G L+V + DV+L + ADWS GV GL I D Y HGV+ D DG H KA+ RA + V E V +DSGVV F TQ LT++ CT GV GA+ LR+ELYSD++ AL
Sbjct: 86 PDILANSKIVIIHSGGDSRRSPLQSLCGKAWSAVNS---TLCEEVMTPFDFLLQNLAKAFKDSPPG------LIVCSSDVLLDFGEY--SKADWSKP-------GVTGLGIPMDI-DYGTRHGVFIHDADG---HVIEFCQKASVEQLRAKGAVHTEVVDGVEVEKVDLDSGVVFFDSQTTQILTNIHLYPPLDACTYMGVDSGATPLRIELYSDIMEAL 283
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A5A8EPJ8_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EPJ8_CAFRO) HSP 1 Score: 112 bits (279), Expect = 9.700e-25 Identity = 92/221 (41.63%), Postives = 109/221 (49.32%), Query Frame = 1
Query: 25 VLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVY---CLDGDGGRG-HAAIS---SKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 666
VLL+HSGGDSQR P Q VCGKAWSAL D P+DLL+E L+ LF G +G +VV + DV+LLIP DW + G GLAI + A NHGVY L GDG H + KAT A P+ V +DSGV+ FS AT L LA + CT GV LR+ELYSDLLLA+ G
Sbjct: 92 VLLIHSGGDSQRLPLQSVCGKAWSALPVFSDRLE--LQAPVDLLIETLTTLFRGVKAG------VVVASSDVLLLIPESF--RVDWPQE-------GATGLAIPSPKALGP-NHGVYHVAALPGDGAASMHVPVERFFQKATVDELAAAGAVS-------PAGEVLLDSGVIYFSPPATSTLLELAQTAPVLSCTYLGVDTATRPLRVELYSDLLLAMSGG 287
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: UPI0007121680 (fucose kinase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007121680) HSP 1 Score: 108 bits (271), Expect = 1.090e-23 Identity = 83/219 (37.90%), Postives = 109/219 (49.77%), Query Frame = 1
Query: 1 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAAISSKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLAL 657
P LA ++++++HSGGDS+RSP Q +CGKAWSA+NS S TP D LL +L+ F G L+V + DV+L ADW+ GV GL I Y HGVY D G KA+ RA ++ N + E V +DSGVV F TQ LT++ CT GV GA+ LR+ELYSD++ AL
Sbjct: 78 PDILANSKIVIIHSGGDSRRSPLQSLCGKAWSAVNS---SLREDVMTPFDFLLLNLADAFRDSPPG------LIVCSSDVLLDFGK--VQKADWTRP-------GVTGLGIPMPI-DYGTRHGVYISDEFGKV--KEFCQKASVEELRAKGAVHKVLVNGIEEERVNLDSGVVFFDSQTTQTLTNIHLYPPLDACTYMGVDNGATPLRIELYSDIMEAL 275
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A0G4HS55_9ALVE (START domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HS55_9ALVE) HSP 1 Score: 97.4 bits (241), Expect = 1.200e-19 Identity = 85/239 (35.56%), Postives = 116/239 (48.54%), Query Frame = 1
Query: 22 RVLLVHSGGDSQRSPTQCVCGKAWSALNS------CGDSGSGRCN---TPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVML--LIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRG----HAAISSKATPPSYRALHRKRRIPTNQVPSET---------VAIDSGVVVFSGAATQALTSLAHSE-TFKGCTSRGVAGGASALRLELYSDLLLALRT 663
R+LLVHSGGDSQR P Q +CGKAWS LN G S R + DL ++ +LF+ + + V DV+L + P + W + V GLAI+A A+ Y HGVY L+ D G ++ SS P R +K P+ V + T +A+DSGVV+ + +L L S GCT RG+AGG LR+ELYSD+L+A+ T
Sbjct: 1326 RILLVHSGGDSQRLPIQSLCGKAWSPLNVPPFGVIIGSPSSRRTEISKSSFDLTFAYMCKLFA-----KFQGDGVAVCCSDVLLSCVAPDDNPRVLLWE-PSDTAVDQTVVGLAISA-ASSYGPKHGVYVLEDDYGSACNCADSSDSSSRIPLPVRTFLQK---PSPSVLAGTAGATSAEGEIALDSGVVLLGTSVVSSLLGLTGSGGALAGCTERGIAGGTDVLRVELYSDILMAVGT 1554
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A7S0K729_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K729_CAFRO) HSP 1 Score: 78.2 bits (191), Expect = 1.020e-14 Identity = 58/126 (46.03%), Postives = 68/126 (53.97%), Query Frame = 1
Query: 25 VLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVY---CLDGDG 393
VLL+HSGGDSQR P Q VCGKAWSAL D P+DLL+E L+ LF G +G +VV + DV+LLIP DW + G GLAI + A NHGVY L GDG
Sbjct: 19 VLLIHSGGDSQRLPLQSVCGKAWSALPVFSDRLE--LQAPVDLLIETLTTLFRGVKAG------VVVASSDVLLLIPESF--RVDWPQE-------GATGLAIPSPKALGP-NHGVYHVAALPGDG 126
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A812MTR0_9DINO (Fcsk protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MTR0_9DINO) HSP 1 Score: 73.2 bits (178), Expect = 2.270e-11 Identity = 67/207 (32.37%), Postives = 94/207 (45.41%), Query Frame = 1
Query: 46 GDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAAISSKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 666
GDSQR P+Q VCGKAWSAL S + + TP D ++ + +L G LVV D +L P + ++ F + G GLAI+ A+ Y HGVY L G ++ S +A Y+ V V +DSGV+ F +L LA + CT V + +R+ELYSD+L+A G
Sbjct: 1 GDSQRMPSQSVCGKAWSALPSL--TTNDELVTPFDHMVAIMMQLLDQAPCG------LVVGCSDTLLSFP----SLSNLEFPED-----GPTGLAISMPAS-YGPRHGVYKLAG------SSDSVQAVESFYQKASVVELESDGAVVDGQVFLDSGVIYFPRKTVSSLIDLARQPVVRRCTYMSVDSNETPIRIELYSDILMAFAGG 183 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7555.18749.1 >prot_Ecto-sp13_S_contig7555.18749.1 ID=prot_Ecto-sp13_S_contig7555.18749.1|Name=mRNA_Ecto-sp13_S_contig7555.18749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDback to top mRNA from alignment at Ecto-sp13_S_contig7555:5921..7207- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7555.18749.1 ID=mRNA_Ecto-sp13_S_contig7555.18749.1|Name=mRNA_Ecto-sp13_S_contig7555.18749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1287bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7555:5921..7207- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7555:5921..7207- >mRNA_Ecto-sp13_S_contig7555.18749.1 ID=mRNA_Ecto-sp13_S_contig7555.18749.1|Name=mRNA_Ecto-sp13_S_contig7555.18749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=666bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7555:5921..7207- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |