mRNA_Ecto-sp13_S_contig7555.18749.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7555.18749.1
Unique NamemRNA_Ecto-sp13_S_contig7555.18749.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: D7FJB1_ECTSI (Fucokinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB1_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 3.030e-110
Identity = 188/244 (77.05%), Postives = 192/244 (78.69%), Query Frame = 1
Query:    1 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDG--------------------GRGHAAISSKATPPSYRALHRKRRIPTNQVPSET--VAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 666
            PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSG SSGSLEPGTLVVTACDVMLL+PPEVAATADWSFD+QSGAAGGVAGLAIAADAAKY  NHGVYCLDG                       R  A  S     P   A  +      N  PS    VAIDSGVVVFSGAAT+ALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG
Sbjct:  113 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGGSSGSLEPGTLVVTACDVMLLVPPEVAATADWSFDQQSGAAGGVAGLAIAADAAKYASNHGVYCLDGGXXXXXQESHGITGVRKYLQKPSREEAEASGAFLNPGGMAAPKNESGNPNHDPSANPEVAIDSGVVVFSGAATRALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 356          
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A6H5LE27_9PHAE (FK protein ( GFPPprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE27_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 6.690e-101
Identity = 184/244 (75.41%), Postives = 187/244 (76.64%), Query Frame = 1
Query:    1 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDG--------------------GRGHAAISSKATPPSYRALHRKRRIPTNQVPSET--VAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 666
            PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSG SSGSLEPGTLVVTACDVMLLIPPEVAATADWSFD QSGAAGGVAGLAIAADAAKY  +HGVYCLDG                       R  A  S     P             N  P+    VAIDSGVVVFSGAAT ALTSLA SETFKGCTSRGVAGGASALRLELYSD+LLALRTG
Sbjct:  113 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGGSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDNQSGAAGGVAGLAIAADAAKYASHHGVYCLDGGXXXXXQKSHGIKGVRKYLQKPSREEAETSGAFINPGSMVTPNNESGNPNHDPNANPEVAIDSGVVVFSGAATWALTSLALSETFKGCTSRGVAGGASALRLELYSDILLALRTG 356          
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A0G4EMB4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EMB4_VITBC)

HSP 1 Score: 117 bits (294), Expect = 9.920e-27
Identity = 85/221 (38.46%), Postives = 114/221 (51.58%), Query Frame = 1
Query:    1 PQGLAAARVLLV-HSGGDSQRSPTQCVCGKAWSALNSCGDSGSGR-CNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAAISSKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLAL 657
            P G  A  +LL+ HSGGDSQRSP Q VCGKA++ LN     G+G   + P DLLLE L RLF+G     ++ G LVV+  DV+L +P           D+      GV G+A   DA +Y   HGVY    +G      ++     P+   +  +       +P   +A+D+GVV F    TQ L  +A S    GCT  G+  G   LR ELYSD++LAL
Sbjct:   68 PGGPPADELLLIIHSGGDSQRSPVQSVCGKAFATLNCQQQGGTGPFLSAPFDLLLESLCRLFAG-----VKKGGLVVSCSDVVLAVP---------HADEGMWGGSGVVGVAAEVDA-RYGPRHGVYVPTTEG-----RVAQFLQKPTEAVMTSEGA----SLPPGKIAVDTGVVYFDTTTTQRLVEMAQSPVLAGCTEAGLKEGQPPLRTELYSDIMLAL 264          
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: W7TJC8_9STRA (L-fucose kinase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJC8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.460e-26
Identity = 94/242 (38.84%), Postives = 121/242 (50.00%), Query Frame = 1
Query:   25 VLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAAISSKATPPSYRALHRKRRIPTNQV-------------------PSETVAIDSGVVVFSGAATQALTSL--AHSETFKGCTSRGVAGGASA-------LRLELYSDLLLALRTG 666
            +L+VHSGGDSQRSPT  VCGKAWS LNS      G  NTP+DLLLE  ++LF+G     +  G LVV + DV+L++PP      DW+  +      GV GLA +  AA    NHGVY          +AI+              R++ T +V                       V ID+GV+ F    T+ L SL  AH+  F+ C SRG   G +A       LRLELY+D+LLAL  G
Sbjct:  102 ILMVHSGGDSQRSPTNSVCGKAWSCLNSHRKEDGGS-NTPIDLLLEQFTQLFAG----GVPSGALVVASSDVLLVLPPW---PVDWASQR------GVVGLAASVPAALGP-NHGVYVT------ATSAIACARRGRDVEERSEDRKVMTQRVMQYLQKASLVDLTAKGAVSTEGNVLIDTGVLFFCPQITRELMSLPKAHA-VFRRCCSRGETEGGTAEGRVEAALRLELYTDMLLALSDG 321          
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A196SM10_BLAHN (L-fucose kinase-like protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SM10_BLAHN)

HSP 1 Score: 114 bits (284), Expect = 2.120e-25
Identity = 85/220 (38.64%), Postives = 113/220 (51.36%), Query Frame = 1
Query:    1 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAA-ISSKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLAL 657
            P  LA ++++++HSGGDS+RSP Q +CGKAWSA+NS   +      TP D LL++L++ F     G      L+V + DV+L       + ADWS         GV GL I  D   Y   HGV+  D DG   H      KA+    RA         + V  E V +DSGVV F    TQ LT++        CT  GV  GA+ LR+ELYSD++ AL
Sbjct:   86 PDILANSKIVIIHSGGDSRRSPLQSLCGKAWSAVNS---TLCEEVMTPFDFLLQNLAKAFKDSPPG------LIVCSSDVLLDFGEY--SKADWSKP-------GVTGLGIPMDI-DYGTRHGVFIHDADG---HVIEFCQKASVEQLRAKGAVHTEVVDGVEVEKVDLDSGVVFFDSQTTQILTNIHLYPPLDACTYMGVDSGATPLRIELYSDIMEAL 283          
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A5A8EPJ8_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EPJ8_CAFRO)

HSP 1 Score: 112 bits (279), Expect = 9.700e-25
Identity = 92/221 (41.63%), Postives = 109/221 (49.32%), Query Frame = 1
Query:   25 VLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVY---CLDGDGGRG-HAAIS---SKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 666
            VLL+HSGGDSQR P Q VCGKAWSAL    D        P+DLL+E L+ LF G  +G      +VV + DV+LLIP       DW  +       G  GLAI +  A    NHGVY    L GDG    H  +     KAT     A            P+  V +DSGV+ FS  AT  L  LA +     CT  GV      LR+ELYSDLLLA+  G
Sbjct:   92 VLLIHSGGDSQRLPLQSVCGKAWSALPVFSDRLE--LQAPVDLLIETLTTLFRGVKAG------VVVASSDVLLLIPESF--RVDWPQE-------GATGLAIPSPKALGP-NHGVYHVAALPGDGAASMHVPVERFFQKATVDELAAAGAVS-------PAGEVLLDSGVIYFSPPATSTLLELAQTAPVLSCTYLGVDTATRPLRVELYSDLLLAMSGG 287          
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: UPI0007121680 (fucose kinase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007121680)

HSP 1 Score: 108 bits (271), Expect = 1.090e-23
Identity = 83/219 (37.90%), Postives = 109/219 (49.77%), Query Frame = 1
Query:    1 PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAAISSKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLAL 657
            P  LA ++++++HSGGDS+RSP Q +CGKAWSA+NS   S      TP D LL +L+  F     G      L+V + DV+L         ADW+         GV GL I      Y   HGVY  D  G         KA+    RA     ++  N +  E V +DSGVV F    TQ LT++        CT  GV  GA+ LR+ELYSD++ AL
Sbjct:   78 PDILANSKIVIIHSGGDSRRSPLQSLCGKAWSAVNS---SLREDVMTPFDFLLLNLADAFRDSPPG------LIVCSSDVLLDFGK--VQKADWTRP-------GVTGLGIPMPI-DYGTRHGVYISDEFGKV--KEFCQKASVEELRAKGAVHKVLVNGIEEERVNLDSGVVFFDSQTTQTLTNIHLYPPLDACTYMGVDNGATPLRIELYSDIMEAL 275          
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A0G4HS55_9ALVE (START domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HS55_9ALVE)

HSP 1 Score: 97.4 bits (241), Expect = 1.200e-19
Identity = 85/239 (35.56%), Postives = 116/239 (48.54%), Query Frame = 1
Query:   22 RVLLVHSGGDSQRSPTQCVCGKAWSALNS------CGDSGSGRCN---TPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVML--LIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRG----HAAISSKATPPSYRALHRKRRIPTNQVPSET---------VAIDSGVVVFSGAATQALTSLAHSE-TFKGCTSRGVAGGASALRLELYSDLLLALRT 663
            R+LLVHSGGDSQR P Q +CGKAWS LN        G   S R     +  DL   ++ +LF+       +   + V   DV+L  + P +      W     +     V GLAI+A A+ Y   HGVY L+ D G       ++ SS   P   R   +K   P+  V + T         +A+DSGVV+   +   +L  L  S     GCT RG+AGG   LR+ELYSD+L+A+ T
Sbjct: 1326 RILLVHSGGDSQRLPIQSLCGKAWSPLNVPPFGVIIGSPSSRRTEISKSSFDLTFAYMCKLFA-----KFQGDGVAVCCSDVLLSCVAPDDNPRVLLWE-PSDTAVDQTVVGLAISA-ASSYGPKHGVYVLEDDYGSACNCADSSDSSSRIPLPVRTFLQK---PSPSVLAGTAGATSAEGEIALDSGVVLLGTSVVSSLLGLTGSGGALAGCTERGIAGGTDVLRVELYSDILMAVGT 1554          
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A7S0K729_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K729_CAFRO)

HSP 1 Score: 78.2 bits (191), Expect = 1.020e-14
Identity = 58/126 (46.03%), Postives = 68/126 (53.97%), Query Frame = 1
Query:   25 VLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVY---CLDGDG 393
            VLL+HSGGDSQR P Q VCGKAWSAL    D        P+DLL+E L+ LF G  +G      +VV + DV+LLIP       DW  +       G  GLAI +  A    NHGVY    L GDG
Sbjct:   19 VLLIHSGGDSQRLPLQSVCGKAWSALPVFSDRLE--LQAPVDLLIETLTTLFRGVKAG------VVVASSDVLLLIPESF--RVDWPQE-------GATGLAIPSPKALGP-NHGVYHVAALPGDG 126          
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Match: A0A812MTR0_9DINO (Fcsk protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MTR0_9DINO)

HSP 1 Score: 73.2 bits (178), Expect = 2.270e-11
Identity = 67/207 (32.37%), Postives = 94/207 (45.41%), Query Frame = 1
Query:   46 GDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMDLLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQSGAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAAISSKATPPSYRALHRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGVAGGASALRLELYSDLLLALRTG 666
            GDSQR P+Q VCGKAWSAL S   + +    TP D ++  + +L      G      LVV   D +L  P    + ++  F +      G  GLAI+  A+ Y   HGVY L G      ++ S +A    Y+            V    V +DSGV+ F      +L  LA     + CT   V    + +R+ELYSD+L+A   G
Sbjct:    1 GDSQRMPSQSVCGKAWSALPSL--TTNDELVTPFDHMVAIMMQLLDQAPCG------LVVGCSDTLLSFP----SLSNLEFPED-----GPTGLAISMPAS-YGPRHGVYKLAG------SSDSVQAVESFYQKASVVELESDGAVVDGQVFLDSGVIYFPRKTVSSLIDLARQPVVRRCTYMSVDSNETPIRIELYSDILMAFAGG 183          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7555.18749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FJB1_ECTSI3.030e-11077.05Fucokinase domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5LE27_9PHAE6.690e-10175.41FK protein ( GFPPprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A0G4EMB4_VITBC9.920e-2738.46Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
W7TJC8_9STRA4.460e-2638.84L-fucose kinase n=4 Tax=Monodopsidaceae TaxID=4250... [more]
A0A196SM10_BLAHN2.120e-2538.64L-fucose kinase-like protein n=1 Tax=Blastocystis ... [more]
A0A5A8EPJ8_CAFRO9.700e-2541.63Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
UPI00071216801.090e-2337.90fucose kinase n=1 Tax=Blastocystis sp. subtype 4 T... [more]
A0A0G4HS55_9ALVE1.200e-1935.56START domain-containing protein n=1 Tax=Chromera v... [more]
A0A7S0K729_CAFRO1.020e-1446.03Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A812MTR0_9DINO2.270e-1132.37Fcsk protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7555contigEcto-sp13_S_contig7555:5921..7207 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score344.0
Seed ortholog evalue5.3e-92
Seed eggNOG ortholog2880.D7FJB1
Model size666
KEGG rclassRC00002,RC00078
KEGG koko:K00976,ko:K05305
KEGG ReactionR01951,R03161
KEGG Pathwayko00051,ko00520,ko01100,map00051,map00520,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009225,GO:0009226,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042350,GO:0042352,GO:0043094,GO:0043173,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046368,GO:0046483,GO:0047341,GO:0050201,GO:0055086,GO:0070568,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576
Exons3
EggNOG free text desc.GDP-L-fucose salvage
EggNOG OGsCOG2605@1,KOG4644@2759
EC2.7.1.52,2.7.7.30
Cds size666
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464024.29356-CDS-Ecto-sp13_S_contig7555:5920..60911681464024.29356-CDS-Ecto-sp13_S_contig7555:5920..6091Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7555 5921..6091 -
1681464024.3057492-CDS-Ecto-sp13_S_contig7555:6200..62951681464024.3057492-CDS-Ecto-sp13_S_contig7555:6200..6295Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7555 6201..6295 -
1681464024.3178868-CDS-Ecto-sp13_S_contig7555:6807..72071681464024.3178868-CDS-Ecto-sp13_S_contig7555:6807..7207Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7555 6808..7207 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7555.18749.1prot_Ecto-sp13_S_contig7555.18749.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7555 5921..7207 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7555.18749.1

>prot_Ecto-sp13_S_contig7555.18749.1 ID=prot_Ecto-sp13_S_contig7555.18749.1|Name=mRNA_Ecto-sp13_S_contig7555.18749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp
PQGLAAARVLLVHSGGDSQRSPTQCVCGKAWSALNSCGDSGSGRCNTPMD
LLLEHLSRLFSGDSSGSLEPGTLVVTACDVMLLIPPEVAATADWSFDKQS
GAAGGVAGLAIAADAAKYVCNHGVYCLDGDGGRGHAAISSKATPPSYRAL
HRKRRIPTNQVPSETVAIDSGVVVFSGAATQALTSLAHSETFKGCTSRGV
AGGASALRLELYSDLLLALRTG
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mRNA from alignment at Ecto-sp13_S_contig7555:5921..7207-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7555.18749.1 ID=mRNA_Ecto-sp13_S_contig7555.18749.1|Name=mRNA_Ecto-sp13_S_contig7555.18749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1287bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7555:5921..7207- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCCAGGGCTTGGCCGCCGCGCGCGTCCTCCTCGTGCACAGCGGTGGCGA CAGCCAGAGGTCCCCAACGCAATGCGTCTGTGGCAAGGCGTGGTCCGCCC TCAACAGCTGCGGAGACAGCGGCAGCGGCAGGTGCAACACCCCGATGGAC CTGCTGCTCGAGCACCTGAGCCGCCTGTTCTCCGGAGACTCGTCCGGGAG TTTGGAACCCGGAACGCTGGTCGTCACCGCGTGTGACGTCATGCTGCTGA TTCCTCCCGAGGTGGCGGCCACCGCCGACTGGTCGTTCGACAAACAGAGC GGCGCCGCCGGGGGCGTGGCCGGTTTGGCGATAGCTGCGGATGCGGCGAA ATACGTCTGTAACCACGGCGTGTACTGCCTGGACGGGGACGGCGGCCGCG GTGGGGGGCAGGAGAGCCACGGCATCACGGGGGTCAGAAAGTGAGCTCTC CTTTTAGTTGAAAGGATTGTCAGTCGGGTGCAGCATTGTTTCCGGCGTGC TGCTGTGATCTTGTTCATGTGCTTGCACGGTTGCCTTTTCGAACGTGGAG CTCCCCCGCCCAGGCATCAGGATTTGCATTCCCTTGTGCTGTGAATCTTT TGGGTCGCTTTGTACAATTGTTTAGACTGGAGCGCGACGTGCCCCTTGAT TGATTCACGGGATATGGGTGGTTTGCCTGTCTTCTGTGCTGACGCGTGTC GTTGATTCTCTGCTGCAGTTTGTTTTCTCTGGATTCTACGTTCGTTCGGG TAACCTCTTTGGGTACGCAGTACGTTGGCTGACCACGGAAGGCGTCCGCT TCAGTTGGACCATTACGGGTGGTCCAAGGTTTTTAACGTGCACACATCAT CGACCTACATGAGGACGAACCCTAGCCTAACCTGCAACCTACACACCGCG TCCGCTACGAAGGCCATGCCGCGATTTCCTCCAAAGCAACTCCGCCTTCG TACCGCGCGCTCCACCGCAAACGACGCATCCCAACCAACCAGGTACCTTC AGAAACCGTCCCTCGAGGAGGCGGAGGCGTCCGGAGCCTTCCTCAACCCT GGCGGCATGGTGACGCCCAAGAATGAGTCTGGAAACCCCAACGACGATCC CAGTGCCAACCCGGAGGTCGCCATCGACTCGGGCGTCGTGGTGTTCTCGG GAGCGGCAACTCAGGCTCTGACGAGCCTTGCGCACTCGGAGACGTTCAAG GGGTGCACCTCGCGGGGTGTGGCCGGGGGGGCTTCCGCGCTGAGGTTGGA GCTGTATTCGGACCTGCTGCTGGCGCTGAGGACGGGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7555:5921..7207-

>mRNA_Ecto-sp13_S_contig7555.18749.1 ID=mRNA_Ecto-sp13_S_contig7555.18749.1|Name=mRNA_Ecto-sp13_S_contig7555.18749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=666bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7555:5921..7207- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCCAGGGCTTGGCCGCCGCGCGCGTCCTCCTCGTGCACAGCGGTGGCGA
CAGCCAGAGGTCCCCAACGCAATGCGTCTGTGGCAAGGCGTGGTCCGCCC
TCAACAGCTGCGGAGACAGCGGCAGCGGCAGGTGCAACACCCCGATGGAC
CTGCTGCTCGAGCACCTGAGCCGCCTGTTCTCCGGAGACTCGTCCGGGAG
TTTGGAACCCGGAACGCTGGTCGTCACCGCGTGTGACGTCATGCTGCTGA
TTCCTCCCGAGGTGGCGGCCACCGCCGACTGGTCGTTCGACAAACAGAGC
GGCGCCGCCGGGGGCGTGGCCGGTTTGGCGATAGCTGCGGATGCGGCGAA
ATACGTCTGTAACCACGGCGTGTACTGCCTGGACGGGGACGGCGGCCGCG
GCCATGCCGCGATTTCCTCCAAAGCAACTCCGCCTTCGTACCGCGCGCTC
CACCGCAAACGACGCATCCCAACCAACCAGGTACCTTCAGAAACCGTCGC
CATCGACTCGGGCGTCGTGGTGTTCTCGGGAGCGGCAACTCAGGCTCTGA
CGAGCCTTGCGCACTCGGAGACGTTCAAGGGGTGCACCTCGCGGGGTGTG
GCCGGGGGGGCTTCCGCGCTGAGGTTGGAGCTGTATTCGGACCTGCTGCT
GGCGCTGAGGACGGGA
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