mRNA_Ecto-sp13_S_contig755.18739.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: D7FQ17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ17_ECTSI) HSP 1 Score: 593 bits (1529), Expect = 3.170e-185 Identity = 299/305 (98.03%), Postives = 301/305 (98.69%), Query Frame = 1
Query: 214 YKEWRGDWGDNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMREDLDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTDDEVQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWPPADPSELEKAFDDSKAAGRIANMGLEKLGAMSAGLGDKLNDNADKALNKARALEMGLKVAAAREKEERAKEDAELDAEDGRGRQQEQQQRVVENPYP 1128
++EWRGDWGDNSMLWTRRRRARLGLVKND DNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMREDLDTAAGLPSAQQKVCELENNPQFVLEVN ITDLKISLIQTDDEVQPAACFVLREDEATSSTQ ERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWPPADPSELEKAFDDSKAAGRIANMGLEKLGAMSAGLGDKLNDNADKALNKARALEMGLKVAAAREKEER KEDAELDAEDGRGRQQEQQQRVVENPYP
Sbjct: 3517 HEEWRGDWGDNSMLWTRRRRARLGLVKNDKDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMREDLDTAAGLPSAQQKVCELENNPQFVLEVNRITDLKISLIQTDDEVQPAACFVLREDEATSSTQPERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWPPADPSELEKAFDDSKAAGRIANMGLEKLGAMSAGLGDKLNDNADKALNKARALEMGLKVAAAREKEERVKEDAELDAEDGRGRQQEQQQRVVENPYP 3821
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: A0A7S2CAD0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAD0_9STRA) HSP 1 Score: 177 bits (448), Expect = 4.860e-48 Identity = 86/202 (42.57%), Postives = 125/202 (61.88%), Query Frame = 1
Query: 241 DNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEM--------REDLDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTDD------EVQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTN 804
D+S LWT R R +L N+NDN FWMSF+DFC F++LYVCRWYDP+RW G W + + DTAAGLPS CE+E+NPQ+ L ++ TDLK+ QT++ EV P F++R ++++ PARV LS++ +++ TG P R+ ER++Y +L+ GTYV++ ++AGMEG VE+ +N
Sbjct: 1 DDSPLWTIRLRRKLKATVNENDNTFWMSFDDFCNAFQTLYVCRWYDPKRWGTKTVHGMWTLGSGSAGAEEDSYDTAAGLPSKHNPNCEIESNPQWALHIHRPTDLKVKFSQTNERGSVGREVLPFVGFIVR-------SEVQGTPARVHSLSKQNIISDTGQPVREVERSVYASLSVGTYVLLAGTYVAGMEGPISVEVMSN 195
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: A0A7S3UU73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU73_HETAK) HSP 1 Score: 173 bits (439), Expect = 5.440e-45 Identity = 97/274 (35.40%), Postives = 152/274 (55.47%), Query Frame = 1
Query: 214 YKEWRGDWGDNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMRED----LDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTD------DEVQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWPPAD------PSELEKAFD---DSKAAGRIANMGLEKLGAMSAGLG---DKLNDNAD 969
++EW+GDW D S LWTRR + +L ++ DN FWMSF+DFC FRSLYVC DP +W E G W++ +DTAAGLPS + C++E NPQ+ L V + ++++L Q + E+ P ++LR+ ++T R++ ++R+ +VA TG R+RE +Y+ L GTY ++ A ++AGMEG F+V++ +N Q+ + +P D +L K + D AN+ + A +AGLG D + D+ D
Sbjct: 59 HEEWKGDWSDLSSLWTRRTKYKLEWA-DEEDNTFWMSFDDFCNCFRSLYVCHNIDPNKWKSAEAHGRWDLGNAEEGRVDTAAGLPSRHNRSCKIEENPQYTLRVFRPSAVRLTLSQVEMTGLAAPEILPVTMYLLRQQQSTLK--------RITEITRDKIVADTGAAVRERELELYLNLQPGTYTILVATYIAGMEGPFRVKVLSNY-QVALEQFYPAPDIEAKGLAGKLAKKLNEQADKXXXXXXANLDKAQAKATAAGLGGDPDAVKDDGD 322
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: A0A7S2B0H8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B0H8_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.130e-43 Identity = 89/227 (39.21%), Postives = 126/227 (55.51%), Query Frame = 1
Query: 214 YKEWRGDWGDNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMRED-----LDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTD------DEVQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWPPADPSELE 861
+ EW+GDW D S LWTRR + RL + D DN FWM+F+DFC FR LYVCRWYDP RW + + W+ E DT AGLP+ CE+ NNPQF ++ TD+KI ++Q D EV P A F+ R + R+ LS++ ++ TG P R RE N+Y +L+ G Y+++ ++AGMEG + + +N + ++WPP E E
Sbjct: 574 HDEWKGDWSDESTLWTRRTKHRLNVTVED-DNTFWMAFDDFCNCFRCLYVCRWYDPHRWQTQQLTAIWQNGEGGDENAYDTTAGLPTKHNPGCEVVNNPQFAFHIHRPTDIKIKIVQPDVGEANVSEVLPIAAFLCRPKHLGVA-------GRIQELSKDNIITDTGQPVRDREFNMYASLSPGVYILLVGTYVAGMEGQVDITVMSNYVA-RTEQIWPPVWTPEKE 791
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: A0A7S3USS7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USS7_HETAK) HSP 1 Score: 173 bits (439), Expect = 1.630e-43 Identity = 97/274 (35.40%), Postives = 152/274 (55.47%), Query Frame = 1
Query: 214 YKEWRGDWGDNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMRED----LDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTD------DEVQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWPPAD------PSELEKAFD---DSKAAGRIANMGLEKLGAMSAGLG---DKLNDNAD 969
++EW+GDW D S LWTRR + +L ++ DN FWMSF+DFC FRSLYVC DP +W E G W++ +DTAAGLPS + C++E NPQ+ L V + ++++L Q + E+ P ++LR+ ++T R++ ++R+ +VA TG R+RE +Y+ L GTY ++ A ++AGMEG F+V++ +N Q+ + +P D +L K + D AN+ + A +AGLG D + D+ D
Sbjct: 215 HEEWKGDWSDLSSLWTRRTKYKLEWA-DEEDNTFWMSFDDFCNCFRSLYVCHNIDPNKWKSAEAHGRWDLGNAEEGRVDTAAGLPSRHNRSCKIEENPQYTLRVFRPSAVRLTLSQVEMTGLAAPEILPVTMYLLRQQQSTLK--------RITEITRDKIVADTGAAVRERELELYLNLQPGTYTILVATYIAGMEGPFRVKVLSNY-QVALEQFYPAPDIEAKGLAGKLAKKLNEQADKXXXXXXANLDKAQAKATAAGLGGDPDAVKDDGD 478
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: A0A2D4BLI3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLI3_PYTIN) HSP 1 Score: 179 bits (453), Expect = 3.410e-43 Identity = 98/235 (41.70%), Postives = 133/235 (56.60%), Query Frame = 1
Query: 214 YKEWRGDWGDNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMREDLDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTDD------EVQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWPPADPSELEKAFDDSKAAGRIA 900
+ EW+GDW D S LWTRR + L + +DN FWMSF+DFC FRSLYVCR+YDP +W L + G W TA GLP+ CELENNPQ+ L+V T+L +++ Q D +V P A +V+ + A RV RL +E VVA +G PARQRE ++ L + Y ++ AA+ GMEG FK+ + TN P ++ +LWP + D K AG +A
Sbjct: 2279 HAEWKGDWSDRSRLWTRRLKKLLAFNADADDNTFWMSFDDFCHAFRSLYVCRYYDPAKWPLLVRHGRWAGA----TAVGLPTRHNPGCELENNPQYTLQVTRPTELLLTVTQVDAAGLAPVDVLPIAVYVVAQGAARDRA------FRVKRLVQEEVVAHSGEPARQRELHLRCELPARAYTILLAAYKKGMEGPFKLTVQTNYP-VEVEQLWP--------ALWKDPKTAGGVA 2494
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: A0A485LHZ7_9STRA (Aste57867_21065 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHZ7_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.010e-41 Identity = 102/282 (36.17%), Postives = 154/282 (54.61%), Query Frame = 1
Query: 214 YKEWRGDWGDNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMREDLDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTDDE------VQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWPPA--DPS----------ELEKAFDDSKAAGRIANMGLEKLGAMSAGLGDKLNDNADKA--LNKARALE 999
+ EWRGDWGD+S LWTRR + LG++ N NDN FWMSF+DFC FR LYVC++YDP +W + G + ++ DTA+GLP+ C LENNP + LEV T++ I++ Q D V P A ++++ A +T RV L + VV +G P R+R I L + TY ++ A+ MEG FKV I +N + ++WP +P +L++A ++++ A R+ + ++AGL D L D D+ L +A+ +E
Sbjct: 2246 HAEWRGDWGDDSPLWTRRLKKHLGVLANANDNTFWMSFDDFCNAFRCLYVCKYYDPDKWKTVTCHGEFSVK--ADTASGLPTRHNLDCALENNPHYALEVTRPTEVIITVTQVDKTGLAPVTVLPLAVYIVQNAMADRAT-------RVKTLDKAHVVQHSGQPVRERSLQIQCVLQARTYTLLVVAYKKEMEGPFKVTIQSNYA-VGVEQIWPAVWREPKAVNRVEAMALKLKEAVEETETAKRLKENATKYKNKIAAGLEDALEDEDDEVARLEEAKTIE 2517
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: A0A6G0X9E6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9E6_9STRA) HSP 1 Score: 172 bits (435), Expect = 6.430e-41 Identity = 99/280 (35.36%), Postives = 152/280 (54.29%), Query Frame = 1
Query: 214 YKEWRGDWGDNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMREDLDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTDDE------VQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWP-----PADPSELEK-------AFDDSKAAGRIANMGLEKLGAMSAGLGDKLNDNADKALNKARALE 999
+ EWRGDW D+S LWTRR + LG+ N NDN FWMSF+DFC FR LYVC++YDP +WT G++ + D TA+GLP+ C ++NNP + L+V T + ++L Q D V P A ++++ S+ +R +RV L + VV +GPP R+R + TL + TY ++ AA+ GMEG F+ I TN + ++WP P + +EK +++ AA ++ + ++AGL + L D +D+ +A E
Sbjct: 2216 HAEWRGDWADDSPLWTRRLKKHLGVTANANDNTFWMSFDDFCNAFRCLYVCKYYDPTKWTTQTFHGTFSVAHD--TASGLPTRHNPNCTVDNNPHYALDVTRPTQVILTLTQVDKTGLAPVTVLPLAIYIVQ------SSMTDRA-SRVKVLDKTNVVKHSGPPVRERRITLQCTLKARTYAIVVAAYQKGMEGPFQFTIQTNYA-VGMEQIWPAVWREPKQRTRVEKMALKLKETVEETAAAKKLVEQANKYKNRIAAGLDNALEDESDQVAELEQAAE 2485
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: F0WE76_9STRA (Uncharacterized protein AlNc14C72G4932 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WE76_9STRA) HSP 1 Score: 171 bits (434), Expect = 8.620e-41 Identity = 94/241 (39.00%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 214 YKEWRGDWGDNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMREDLDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTDD------EVQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWPPADPSELEKAFDDSKAAGRIANMGLEK 918
+ EW+GDW D+S WTRR R L + DN FWMSF+DFC FRSLYVCR+YDP +W + GSW DTA GLPS CE+ NPQ++L+++ T++ I + Q D +VQP +V+ +A S + R + V+ L++E VVA +G R+R+ + LA TY ++ A + MEG F++ I +N P +K +LWPP E + K A I +EK
Sbjct: 2235 HPEWKGDWSDSSRFWTRRLRRLLNYTPDVQDNKFWMSFDDFCHAFRSLYVCRYYDPTKWPSITMQGSWRTN---DTAGGLPSRHNSNCEIAKNPQYLLQLDRPTEIIIHVTQVDPSGIAAVDVQPFGIYVVAPSQA--SVKRTREVSLVAHLNKENVVAFSGEVKRERQIQLTCELAPRTYTILVATYRKEMEGFFRMAIQSNYP-VKCTQLWPPVR-KEKGEVTTTGKIAQTIKQNAIEK 2468
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Match: A0A397A8M0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A8M0_9STRA) HSP 1 Score: 171 bits (434), Expect = 8.640e-41 Identity = 96/270 (35.56%), Postives = 152/270 (56.30%), Query Frame = 1
Query: 214 YKEWRGDWGDNSMLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLEQSGSWEMREDLDTAAGLPSAQQKVCELENNPQFVLEVNCITDLKISLIQTDDE------VQPAACFVLREDEATSSTQLERFPARVSRLSREVVVASTGPPARQRERNIYVTLASGTYVVMCAAFLAGMEGSFKVEITTNSPQLKFRKLWP-----PADPSELEK-------AFDDSKAAGRIANMGLEKLGAMSAGLGDKLNDNAD 969
+ EWRGDWGD+S LWTRR + LG++ N NDN FWMSF+DFC FR LYVC++YDP +WT+L + G++ ++ D TA+GLP+ C LENNP + L V T++ I+++Q D V P A ++++ A ++ RV L + V+ +G P R+R+ ++ L + TY ++ AA+ MEG F++ I +N ++ ++WP P + +EK +D+ A ++ + ++AGL D L D D
Sbjct: 2265 HAEWRGDWGDDSPLWTRRLKKHLGVLANSNDNTFWMSFDDFCNAFRCLYVCKYYDPDKWTKLIRHGAFSIKSD--TASGLPTRHNPDCTLENNPHYSLGVTRPTEVIITVMQVDKAGLAPVTVLPIAVYIVQGAMADRAS-------RVKVLDKLHVIKHSGAPVRERQVSLQCVLQARTYTILIAAYKKDMEGPFQLTIQSNYG-VEVDQIWPAVWREPKAMNHMEKMAMKLKETVEDTAAGKKLVANATKYKNRIAAGLEDALQDEGD 2524 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig755.18739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig755.18739.1 >prot_Ecto-sp13_S_contig755.18739.1 ID=prot_Ecto-sp13_S_contig755.18739.1|Name=mRNA_Ecto-sp13_S_contig755.18739.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp MLWTRRRRARLGLVKNDNDNAFWMSFNDFCVVFRSLYVCRWYDPRRWTRLback to top mRNA from alignment at Ecto-sp13_S_contig755:12952..17821- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig755.18739.1 ID=mRNA_Ecto-sp13_S_contig755.18739.1|Name=mRNA_Ecto-sp13_S_contig755.18739.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig755:12952..17821- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig755:12952..17821- >mRNA_Ecto-sp13_S_contig755.18739.1 ID=mRNA_Ecto-sp13_S_contig755.18739.1|Name=mRNA_Ecto-sp13_S_contig755.18739.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=882bp|location=Sequence derived from alignment at Ecto-sp13_S_contig755:12952..17821- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |