prot_Ecto-sp13_S_contig7543.18732.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7543.18732.1
Unique Nameprot_Ecto-sp13_S_contig7543.18732.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length151
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7543.18732.1 vs. uniprot
Match: A0A6H5L4V6_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V6_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.010e-19
Identity = 103/110 (93.64%), Postives = 104/110 (94.55%), Query Frame = 0 
Query:   42 MAETYPEIPAILRPTDRSPPPDFFPVSPGTAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRVRKMXXXXXXXXXXXXAAGEVRSGRLETLGWVSASWEPR 151
            MAETYPEIPAILRPTDRSPPPDFFPVSPGTAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXX+AGEVRSGRLETLGWVSASWEPR
Sbjct:    1 MAETYPEIPAILRPTDRSPPPDFFPVSPGTAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGEVRSGRLETLGWVSASWEPR 110
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BLAST of mRNA_Ecto-sp13_S_contig7543.18732.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.230e-9
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0 
Query:   42 MAETYPEIPAILRPTDRSPPPDFFPVSPGTAKA 74
            MAETYPEIPAILRPTDRSPPPDFFPVSP TAKA
Sbjct:    1 MAETYPEIPAILRPTDRSPPPDFFPVSPRTAKA 33
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7543.18732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4V6_9PHAE1.010e-1993.64Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LS90_ECTSI1.230e-996.97eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7543contigEcto-sp13_S_contig7543:3811..6513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7543.18732.1mRNA_Ecto-sp13_S_contig7543.18732.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7543 3811..6515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7543.18732.1 ID=prot_Ecto-sp13_S_contig7543.18732.1|Name=mRNA_Ecto-sp13_S_contig7543.18732.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=151bp
FFIPAGSPGIVAVLSPVKGSSVFRDSCTSAPALSKKDGEEDMAETYPEIP
AILRPTDRSPPPDFFPVSPGTAKAKAASKAAAAAAAGGVPRTQQSRSRSR
SGDDEDREEYIRVRKMVEEEDDDEDDEDAAGEVRSGRLETLGWVSASWEP
R
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