prot_Ecto-sp13_S_contig1222.1870.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1222.1870.1
Unique Nameprot_Ecto-sp13_S_contig1222.1870.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length217
Homology
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: D7G7G8_ECTSI (Similar to vacuolar protein sorting 24 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G8_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 1.590e-126
Identity = 212/216 (98.15%), Postives = 214/216 (99.07%), Query Frame = 0
Query:    1 MHRLLHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPEPAAVAAXXXXAEEEEKANAMKARLESL 216
            M RLLHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELV SRNAKNRMHEGKAQLHSVQMQLQNQIALI+VTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGL+LTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPEPAAVAAXXXXAEEEEKANAMKARLESL
Sbjct:    1 MRRLLHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVMSRNAKNRMHEGKAQLHSVQMQLQNQIALIKVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLSLTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPEPAAVAAXXXXAEEEEKANAMKARLESL 216          
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: A0A835ZDQ5_9STRA (Vacuolar protein-like protein sorting 24 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ5_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.210e-55
Identity = 101/183 (55.19%), Postives = 137/183 (74.86%), Query Frame = 0
Query:    7 RKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE 189
            +KVDP+EQAKEW R++N E+R +ERQI S++  E K+ +DIK +AKEG+RNE+A+R+LA+++VT R  K RM+EGK Q+HSVQMQL+NQ+AL++VTG + KSTE+M  +G LV IPELQ  M  LA EMERAGL EE++ D +  T     D + D EV+KV+AEIT   + GA +AP   P+
Sbjct:    1 KKVDPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNED-EVDQEVEKVLAEITATTMAGAEEAPVGEPQ 182          
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: A0A8J2S9J1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 7.530e-42
Identity = 89/212 (41.98%), Postives = 141/212 (66.51%), Query Frame = 0
Query:    5 LHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPEPAAVAAXXXXAEEEEKANAMKARLESL 216
            L +  DP+E+ K+WRR +  E RA++R+I  LE+ E+K + + +   KEG ++  A +++A+E+V +R A+NRM   KAQ++SV MQLQ Q A++R  G +KKSTE+M  +  LVK+PELQ+ M ++  EMER+GL+EEVV D L   D + ++ + + +V+KV+ E+   + +G  DAP  +PE  AV      AE ++  + MKARL++L
Sbjct:    9 LQKAKDPQEEMKKWRRELRKEQRAMDREISKLEQMERKSRDECRKYGKEGRQD--ACKIVAREIVRTRAARNRMLMAKAQINSVNMQLQTQAAMVRAAGCMKKSTEVMRCMNKLVKLPELQKTMMEMQREMERSGLIEEVVGDALDELDGDDVEEETELQVNKVVEELAGDLFKGQTDAPETLPEQQAV----EPAEADDDLDTMKARLQAL 214          
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: A0A2R5GMG8_9STRA (Charged multivesicular body protein 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMG8_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.190e-40
Identity = 89/189 (47.09%), Postives = 134/189 (70.90%), Query Frame = 0
Query:    1 MHRLLHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALT-DAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVP 188
            + R+  ++ DP E  KEW R++  E R L+RQ+  +ER E K+Q+DIK +AK+G     AIR LA  LV S+ AKNR++  KA ++SV +QL++Q A +R+  V++ ST++MA++  LVK+PE+ +NM ++A EMERAGL+EE++ D +  T D EG+D +ADA VD++IAE+T G+L+ A  APT  P
Sbjct:   12 LERVGLKQPDPRELVKEWTRNLRREQRMLDRQLRQIEREELKMQRDIKMLAKKGEMA--AIRPLAHSLVQSKKAKNRINVTKAHMNSVNLQLRHQAAQMRMAQVMQSSTKVMAAMNSLVKMPEVAKNMQEMAMEMERAGLIEEIMDDAMESTFDDEGMDGEADAAVDQIIAELTTGLLDKAPAAPTTAP 198          
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: A0A507DEA3_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DEA3_9FUNG)

HSP 1 Score: 142 bits (357), Expect = 1.080e-38
Identity = 77/177 (43.50%), Postives = 125/177 (70.62%), Query Frame = 0
Query:    1 MHRLLHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVL 177
            ++ L+ +K+ PEEQ K+WR  +  + R LER+I S++  E KV++DIK  AK G +   +   LAKE+V +R AK RM+  KAQ++S+ MQLQ Q+A+I+V G I+KS E+M  +  L+K+PE+ +NM ++  EM +AG++EE++ D + + D EG+D +++  VDKV+ E+T+G+L
Sbjct:    5 LNMLVGKKLSPEEQVKKWRSDMRQQERELERRIRSIDSEEAKVKRDIKAAAKRGDKT--SCMTLAKEVVNARKAKERMYTSKAQMNSIIMQLQQQVAMIKVAGNIQKSAELMKLVNKLIKVPEMSKNMQEMQREMMKAGIIEEMMNDAIDMADDEGIDDESEEIVDKVLLELTDGLL 179          
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: A0A1Y2CQ12_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CQ12_9FUNG)

HSP 1 Score: 139 bits (351), Expect = 3.750e-38
Identity = 82/186 (44.09%), Postives = 130/186 (69.89%), Query Frame = 0
Query:    5 LHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKA-IRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVL--EGAVDAPTAV 187
            + +++ PEEQ K+W+ SI  + R L++QI  +E AE KV+KDIK  AK   RN+ A  RLLAKE+V SR A++R+H  KAQL+S+ MQLQ Q+A+ +V G +K+ST+IM  + +L+K+PE+   M +++ EM +AG++ E++ D +   D EG++ +AD EV+ ++ ++T+G+L   G V AP  V
Sbjct:    1 MFKRLTPEEQVKKWKASIRGQERELDKQIRGIETAEAKVKKDIKAAAK---RNDAASCRLLAKEIVRSRKARDRLHTSKAQLNSLSMQLQQQLAVAKVAGSLKQSTDIMKIVNNLIKLPEIHNTMQEMSKEMMKAGIIGEMMEDAIDTLDEEGIEEEADKEVENILFDLTDGLLGQAGQVGAPLEV 183          
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: UPI00145575B8 (charged multivesicular body protein 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145575B8)

HSP 1 Score: 139 bits (350), Expect = 1.350e-37
Identity = 92/211 (43.60%), Postives = 138/211 (65.40%), Query Frame = 0
Query:   10 DPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE--PAAVAAXXXXAEEE--EKANAMKARLESL 216
            DP+EQ +EW R++  E R L+RQI S+ER E KV++ IK  AK+G ++    ++LAKE+V SR AK R+H  KAQL+SV MQ++NQ+A+IR++G + KSTE+M  +  L K+ E+Q  M +++ EM +AG++EE++ D     + + L+  +  EV+K++ EIT   L    DAP AV +  PA   A     EEE  E  + M+ARLE+L
Sbjct:   11 DPKEQVQEWTRNLTKESRKLDRQIRSIEREELKVKRSIKEAAKKGQKD--VCKILAKEIVNSRKAKTRIHTSKAQLNSVSMQMKNQLAVIRMSGALSKSTEVMKYMQQLCKVSEVQATMMEMSKEMMKAGIIEEMLEDTFESMEDDDLEEASSEEVEKILFEITANHLS---DAPKAVKDDLPAGATAVVSDEEEEVAEDISEMQARLEAL 216          
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: A0A433PQA2_9FUNG (Vacuolar sorting protein VPS24 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQA2_9FUNG)

HSP 1 Score: 139 bits (350), Expect = 1.430e-37
Identity = 90/212 (42.45%), Postives = 143/212 (67.45%), Query Frame = 0
Query:    8 KVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLE--GAVDAPTAVPE-PAAVAAXXXXAEEEEKANAMKARLESL 216
            K  PEE  K+WR+ I  + RALERQ+  +E  E KV+K +K +AK G  ++KA   LAKELV S+  K R++  KAQL+S+ MQL NQ++ +++ GV++KS+EIM  +  +V++PE+ + M +++ EM +AG+++E++ D +   D E L+A+AD EV+KV+ ++T+G+L   G V AP  VPE PA+        EEE + + M+ RL++L
Sbjct:   14 KKTPEELVKKWRQDIRAQERALERQLRGIEGEELKVKKSLKALAKRG--DKKACMTLAKELVRSKRHKERLYTSKAQLNSIVMQLNNQLSTLKIAGVLQKSSEIMKLVNQVVRLPEISQAMQEMSMEMMKAGIMDEMIQDTMESLDDEDLEAEADEEVNKVLFQVTDGLLGEVGQVGAPLEVPELPAS-----EEEEEEPELDIMQKRLQAL 218          
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: A0A4P9YWD9_9FUNG (Snf7-domain-containing protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YWD9_9FUNG)

HSP 1 Score: 139 bits (349), Expect = 2.020e-37
Identity = 95/219 (43.38%), Postives = 140/219 (63.93%), Query Frame = 0
Query:    3 RLLHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVL--EGAVDAP---TAVPEPAAVAAXXXXAEEEEKANAMKARLESL 216
            R + R   PEE  +EWR+SI  + R LERQI S+E  E KV++ IK  A  G ++  + R+LAKELV SR  K R+H  KA L S+ MQLQ Q+A+++++G +K+STE+M ++  LV++PEL   M  ++ EM +AG++ E++ D + + D E L+ +AD EV+KV+ E+T G L   GA+ A    TA P  AA A      E E +  +M+ARLE+L
Sbjct:    6 RFIFRTRKPEELVREWRQSIRAQERQLERQIRSIETEELKVKRTIKQAA--GRKDTASCRMLAKELVRSRRQKTRLHTNKAHLSSINMQLQQQLAMLKMSGTLKQSTEVMRAVNRLVRVPELSAQMQAMSMEMMKAGVISEMMEDTMDMLDDEELEDEADEEVEKVLFEVTNGKLGEAGAMPAEHIATATPAEAAAAVE----EGEPELESMQARLEAL 218          
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Match: A0A1X7VAT8_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VAT8_AMPQE)

HSP 1 Score: 137 bits (344), Expect = 9.330e-37
Identity = 78/174 (44.83%), Postives = 122/174 (70.11%), Query Frame = 0
Query:    4 LLHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVL 177
            LL +K DP+EQ ++WR  +  E R ++RQI S++  E KV+K I+  AK+G  +    ++LAKELV SR A ++++  KAQ++SV MQ+QNQ+A +R+ G I KST++M ++ DLVK+PE++  M  L+ EM RAGL+EE++ D L   + + +D  AD E++KV+ E+T+G L
Sbjct:    3 LLGKKPDPKEQVRDWRSKMRKEQRVIDRQIRSIQTEEMKVKKSIRDAAKKGQTD--VCKILAKELVHSRKAVSKLYASKAQMNSVVMQMQNQLATMRMAGAISKSTDVMHAMNDLVKLPEIRAAMMDLSKEMARAGLIEEMMEDTLEGLEDDDVDDLADEEIEKVLLEVTQGKL 174          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1222.1870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7G8_ECTSI1.590e-12698.15Similar to vacuolar protein sorting 24 homolog n=2... [more]
A0A835ZDQ5_9STRA2.210e-5555.19Vacuolar protein-like protein sorting 24 (Fragment... [more]
A0A8J2S9J1_9STRA7.530e-4241.98Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2R5GMG8_9STRA2.190e-4047.09Charged multivesicular body protein 3 n=1 Tax=Hond... [more]
A0A507DEA3_9FUNG1.080e-3843.50Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
A0A1Y2CQ12_9FUNG3.750e-3844.09Uncharacterized protein (Fragment) n=1 Tax=Rhizocl... [more]
UPI00145575B81.350e-3743.60charged multivesicular body protein 3-like n=1 Tax... [more]
A0A433PQA2_9FUNG1.430e-3742.45Vacuolar sorting protein VPS24 n=1 Tax=Endogone sp... [more]
A0A4P9YWD9_9FUNG2.020e-3743.38Snf7-domain-containing protein n=1 Tax=Syncephalis... [more]
A0A1X7VAT8_AMPQE9.330e-3744.83Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..53
NoneNo IPR availableCOILSCoilCoilcoord: 199..216
NoneNo IPR availablePANTHERPTHR10476:SF1CHARGED MULTIVESICULAR BODY PROTEIN 3coord: 8..216
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 8..216
IPR005024Snf7 familyPFAMPF03357Snf7coord: 17..186
e-value: 2.3E-24
score: 85.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1222contigEcto-sp13_S_contig1222:1818..6406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1222.1870.1mRNA_Ecto-sp13_S_contig1222.1870.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1222 2..6606 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1222.1870.1 ID=prot_Ecto-sp13_S_contig1222.1870.1|Name=mRNA_Ecto-sp13_S_contig1222.1870.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp
MHRLLHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTM
AKEGTRNEKAIRLLAKELVTSRNAKNRMHEGKAQLHSVQMQLQNQIALIR
VTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLA
LTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPEPAAVAAPAAAA
EEEEKANAMKARLESL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam