prot_Ecto-sp13_S_contig7528.18714.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7528.18714.1
Unique Nameprot_Ecto-sp13_S_contig7528.18714.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length298
Homology
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: D8LSH2_ECTSI (Lissencephaly protein 1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH2_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.290e-30
Identity = 90/95 (94.74%), Postives = 90/95 (94.74%), Query Frame = 0
Query:   32 MRTDRDSPQLSTASTSRSTTAXXXXXXXXXXXXXXXXS-SIFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALRLK 125
            MRTDR SPQLSTASTSRST  XXXXXXXXXXXXXXXX  SIFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALRLK
Sbjct:    1 MRTDRSSPQLSTASTSRSTXXXXXXXXXXXXXXXXXXXXSIFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALRLK 95          
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: A0A3L6VRZ9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VRZ9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.770e-9
Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   69 SSIFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 123
            S  FP+DP L+RTFRG  + V  +SY+P+M+QL S + D  +M+W F+ Q+RA R
Sbjct:   29 SDCFPMDPSLQRTFRGHKSGVECLSYNPNMRQLASGSLDCTVMIWNFKPQMRAFR 83          
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: A0A3R6XQU3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XQU3_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.470e-8
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   69 SSIFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 123
            S  FP+DP L+RTFRG  + V  +SYSP+M+QL S + D  +M+W F+ Q+RA R
Sbjct:   29 SDCFPMDPSLQRTFRGHKSGVECLSYSPNMRQLASGSLDCTVMIWNFKPQMRAFR 83          
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: A0A3S0ZAS1_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZAS1_ELYCH)

HSP 1 Score: 65.5 bits (158), Expect = 2.580e-8
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   75 DPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 123
            DP LER FRG    VT V +SP+M QL SS+ DNNLMVW F+A++RA R
Sbjct:    6 DPSLERHFRGHRDVVTAVDFSPNMTQLASSSLDNNLMVWNFKAKMRAYR 54          
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: R1F002_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F002_EMIHU)

HSP 1 Score: 64.7 bits (156), Expect = 3.140e-8
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   73 PVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 123
            P+DP LER+FRG    V+ VS+SP MKQLVS   D  +MVW F+ Q+RA R
Sbjct:    6 PMDPALERSFRGHKDGVSSVSFSPTMKQLVSGGLDGTVMVWNFKMQMRAFR 56          
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: A0A2C9JD71_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JD71_BIOGL)

HSP 1 Score: 64.3 bits (155), Expect = 6.080e-8
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   75 DPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 123
            DP LER FRG    VT V ++P+M QL SS+ DNNLMVW F+A++RA R
Sbjct:    6 DPSLERHFRGHRDVVTSVDFNPNMTQLASSSLDNNLMVWNFKAKMRAYR 54          
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: UPI000359547A (POC1 centriolar protein homolog A isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI000359547A)

HSP 1 Score: 64.3 bits (155), Expect = 6.130e-8
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   75 DPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 123
            DP LER FRG    VT V ++P+M QL SS+ DNNLMVW F+A++RA R
Sbjct:    6 DPSLERHFRGHRDVVTAVDFNPNMTQLASSSLDNNLMVWNFKAKMRAYR 54          
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: A0A418F511_9STRA (Macro domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418F511_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 7.660e-8
Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   69 SSIFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 123
            S  FP+DP L+RTFRG  + V  +SY+P+M+QL S + D  +M+W F+ Q+RA R
Sbjct:   29 SDCFPMDPSLQRTFRGHKSGVECLSYNPNMRQLASGSLDCTVMIWNFKPQMRAFR 83          
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: A0A0B7BTT4_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7BTT4_9EUPU)

HSP 1 Score: 62.8 bits (151), Expect = 1.970e-7
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   75 DPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 123
            DP LER FRG    VT V +SP+M QL SS+ D+NLMVW F+A++RA R
Sbjct:    6 DPYLERHFRGHQDVVTSVDFSPNMTQLASSSLDHNLMVWNFKAKMRAYR 54          
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Match: A0A2G8LCQ3_STIJA (Putative POC1 centriolar protein-like A isoform X2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LCQ3_STIJA)

HSP 1 Score: 61.6 bits (148), Expect = 4.820e-7
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   71 IFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 123
            + P DP LER ++G    VT V ++P+MKQL S   D+ LMVW F+AQ+RA R
Sbjct:   39 LVPEDPTLERNYKGHRDTVTSVDFNPNMKQLASGGMDSCLMVWNFKAQMRAFR 91          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7528.18714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LSH2_ECTSI1.290e-3094.74Lissencephaly protein 1-like n=1 Tax=Ectocarpus si... [more]
A0A3L6VRZ9_9STRA1.770e-949.09Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A3R6XQU3_9STRA2.470e-850.91Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A3S0ZAS1_ELYCH2.580e-861.22Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
R1F002_EMIHU3.140e-856.86Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A2C9JD71_BIOGL6.080e-859.18Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
UPI000359547A6.130e-859.18POC1 centriolar protein homolog A isoform X1 n=2 T... [more]
A0A418F511_9STRA7.660e-849.09Macro domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A0B7BTT4_9EUPU1.970e-759.18Uncharacterized protein n=1 Tax=Arion vulgaris Tax... [more]
A0A2G8LCQ3_STIJA4.820e-750.94Putative POC1 centriolar protein-like A isoform X2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 143..157
score: 36.0
coord: 267..281
score: 32.7
coord: 225..239
score: 32.09
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 241..280
e-value: 1.6E-11
score: 54.3
coord: 199..238
e-value: 2.7E-9
score: 46.9
coord: 117..156
e-value: 4.4E-7
score: 39.5
coord: 159..196
e-value: 0.0094
score: 25.1
coord: 75..114
e-value: 3.9E-5
score: 33.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 243..280
e-value: 5.8E-8
score: 33.3
coord: 165..194
e-value: 2.5E-4
score: 21.8
coord: 79..113
e-value: 0.0053
score: 17.6
coord: 203..238
e-value: 2.1E-8
score: 34.7
coord: 124..155
e-value: 5.2E-7
score: 30.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 124..155
score: 15.154
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 206..247
score: 15.755
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 82..116
score: 11.645
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 248..289
score: 14.017
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 166..194
score: 9.339
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 198..298
e-value: 7.6E-34
score: 118.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 40..197
e-value: 2.1E-32
score: 114.1
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 74..297
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 74..297
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 225..239
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 267..281
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 82..298
score: 48.907
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 73..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7528contigEcto-sp13_S_contig7528:1..4585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7528.18714.1mRNA_Ecto-sp13_S_contig7528.18714.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7528 1..4585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7528.18714.1 ID=prot_Ecto-sp13_S_contig7528.18714.1|Name=mRNA_Ecto-sp13_S_contig7528.18714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=298bp
MTSRSSNFGGGSSSGRLARGGHRRFSGLDQTMRTDRDSPQLSTASTSRST
TAAAKHGGLRASAAAAAASSIFPVDPELERTFRGRGAAVTGVSYSPDMKQ
LVSSATDNNLMVWTFRAQLRALRLKGHSATVLHAEFSPNGSLVASASKDR
TVRLWTPSARGGSSVLKGHMGGVRHASFSRNGRLLITASDDKTIWSLPSQ
RFVCTLNGHNNWVRCATFSPDSRLATSCGDDKAVRLWDVQTQACLRTFFD
HDGPVRQARFHPDGTCVAACSADRTIKVWDTRSHQLLQHYPAHDGDVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf