mRNA_Ecto-sp13_S_contig7486.18673.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: D8LTJ1_ECTSI (DFRP_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ1_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 3.430e-143 Identity = 263/269 (97.77%), Postives = 264/269 (98.14%), Query Frame = 1
Query: 4 PPKQQKGKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTEQQRASDAAKSKKMASKEAKKAQEAELAALFDEALLTGVKKGGTAGKGKTPAVAVETKAKQVQETFVIEEGEKTLEDMIEEQRTKLHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLFEDDADAVDNDTMKQRNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVKVEEALFEGDDEDLDDLDDDEGA 810
PPKQQKGKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTEQQRASDAAKSKKMASKEAKKAQEAELAALFDEALLTGVKKGGTAGKGKTPAVAVETKAKQVQETFVIEEGEKTLEDMIEEQRTKLHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLS+LSGRALYDYDATLFEDDADAVDNDTMKQRNDXXXXXXXXXXXXXXXXXXXXXXXX GVKVEEALFEGDDEDLDDLDDDEGA
Sbjct: 2 PPKQQKGKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTEQQRASDAAKSKKMASKEAKKAQEAELAALFDEALLTGVKKGGTAGKGKTPAVAVETKAKQVQETFVIEEGEKTLEDMIEEQRTKLHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSVLSGRALYDYDATLFEDDADAVDNDTMKQRNDXXXXXXXXXXXXXXXXXXXXXXXXGGVPAGVKVEEALFEGDDEDLDDLDDDEGA 270
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: A0A835ZLI2_9STRA (DFRP_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLI2_9STRA) HSP 1 Score: 170 bits (430), Expect = 4.800e-48 Identity = 112/202 (55.45%), Postives = 143/202 (70.79%), Query Frame = 1
Query: 55 LIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTEQQRASDAAKSKKMASKEAKKAQEAELAALFDEALLTGVK--KGGTAGKGKTP-AVAVETKAKQVQETFVI-EEGEKTLEDMIEEQRTKLHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLFEDDADAVDNDTMKQRND 648
+IEDKTFGLKNK+KSK+VQ+Y++TV+K+V ++ ++A K+K+ E E+ ALF+EAL+ G K K G GKG P VAV+T+ KQVQETFV+ EE EKT+ED+IEEQR KL EGK GTPV ETLA WKA R A + EERR V+ EM KK K KGL++LSGRAL+DYDA+LF+DD DA + R +
Sbjct: 14 VIEDKTFGLKNKSKSKAVQQYVATVEKNVKNSAGAAQAEANKAKRXXXXXXXXXAELEMKALFNEALVAGKKAPKAG-GGKGAEPDPVAVDTREKQVQETFVVAEETEKTIEDLIEEQRAKLAAEGKAGTPVTSETLAAWKARRAAARRDEERRMVEREMAKKGKKKGLAVLSGRALFDYDASLFKDDEDACGQEETSLREE 214
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: A0A7S3M6K0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6K0_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.620e-30 Identity = 97/240 (40.42%), Postives = 143/240 (59.58%), Query Frame = 1
Query: 13 QQKGKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTEQQRASDAAKSKKMA--SKEAKKAQEAELAALFDEALLTGVKKGGTAGKGKTPAVAVETKAKQVQE--------------------TFVIEEGE-------KTLEDMIEEQRTKLHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLFEDDADAVDNDTMKQRN 645
Q+ KKAV KK++ I++ TFGLKNKNKSK VQ++I+ V+KSV + Q +DAAK+K+M +K A++ QE EL LF+E + K +A K A+ + ++K++ F+ +E E KT+ED+IEEQR KL EGK+GTPV E+ A W+ + A+K AE +V+AE+ KK GKGLS+LSG+ L++Y+++LF DD A+D + N
Sbjct: 21 QKPSKKAVREKKEKTIDEATFGLKNKNKSKKVQQFINRVEKSVKN--QNGGADAAKAKEMKKENKLAQQLQEEELRILFNEGIANQFGKKKSAAAAKAGALGLTEQSKEIAAFMEGISSDDSDDESDNDEGPIFIDDEPEATVIFREKTIEDIIEEQRAKLAAEGKKGTPVTAESFATWRTAKLAQKQAEAEARVKAELTKKKGGKGLSVLSGKELFNYNSSLFVDDDGAIDESEEQAMN 258
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: A0A7S2BQG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG9_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.940e-26 Identity = 99/243 (40.74%), Postives = 138/243 (56.79%), Query Frame = 1
Query: 4 PPKQQKGKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTEQQRASDAAKSKKMASKEAKKAQEAELAALFDEAL--LTGVKKGGTAGKGKTPAVAVETKAKQVQET------FVIEE----------------------------GEK-TLEDMIEEQRTKLHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLFEDDADAVD 621
P K+ KKA KK ++IEDKTFGLKNKNKSK VQ +I VQ +V S+ + A + K++K A+K AK + EL ALF+EAL G+KK T + A K ++ ++T F+ +E EK TLE +IE +R K+ EG+ GTPV +E+LA+WK+DR+ ++ KV+AEMKKK GKGLS+LSG+ L+ Y+ +LF DD +A D
Sbjct: 3 PKKKNANKKADQKKKDKIIEDKTFGLKNKNKSKKVQGFIKNVQNNVQSSSGKNA-EQMKAEKKAAKVAKMQADEELRALFNEALDGSGGLKKQKTKKDKQKEQAASIRKEERDKDTLMKDYPFIADEMLAMTGMLNDMEPEELDEQLAIFKKTGKSEKLTLEQIIELERAKMRAEGRIGTPVTEESLARWKSDREERRRLANIAKVEAEMKKKKGGKGLSVLSGKDLFAYNQSLFVDDEEADD 244
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: A0A7S1VVP4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVP4_9STRA) HSP 1 Score: 112 bits (281), Expect = 4.820e-26 Identity = 107/280 (38.21%), Postives = 143/280 (51.07%), Query Frame = 1
Query: 58 IEDKTFGLKNKNKSKSVQKYISTVQKSV-NSTE--QQRASDAAKSKKMASKEAKKAQEAELAALFDEALLTGVKKGGTAGKGKTPA-------------------VAVETKAKQVQETFVIEEGE-KTLEDMIEEQRTK----LHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLF----EDDADAVDNDTMKQRNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVKVEEALF-EGDDEDLDDLDDD 801
IEDKTFGLKNKNKS V+ ++ +V+KSV NS + +R + +K +K +KA + E ALFDEALL KKG GK A + + AK+++E + TLED IE +R + L GK GTPV +E+ W+ ++ +K E R+KV+AE+KKK GKGLS+LSGRALY+Y LF ED A V ++ + N KVEE LF EGDD+DLDDLD+D
Sbjct: 25 IEDKTFGLKNKNKSAKVRAHVKSVEKSVLNSGDPRMRRLEEQRTKQKAEAKARRKAAKQEQQALFDEALLAVQKKGKNLKAGKVSAQGRDGDDDKKKAGTSRAMKMMYQMDAKEMEERLRDDPNYVPTLEDNIEAERQRKLAELKESGKTGTPVTEESFRAWQERKRKRKADEARKKVEAELKKKKGGKGLSVLSGRALYEYKKELFVDKDEDGAAVVSPKSIPEEN-----------------------GNSVDHVAEKVEENLFLEGDDDDLDDLDED 281
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: A0A6T6H7B8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6H7B8_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.400e-25 Identity = 114/286 (39.86%), Postives = 146/286 (51.05%), Query Frame = 1
Query: 25 KKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTEQQRASDAAKSKKMAS--KEAKKAQEAELAALFDEALLTGVKKGGTAGK-GKTPAVAVE----------TKAKQVQETFVIEEGEK----------TLEDMIEEQRTKLHREGK---QGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLFEDDADAVDNDTMKQRNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVKVEEALF-EGDDEDLDDLDDD 801
KK KK ++IED+TFGLKNKNKSK VQ++I +V K V S +++ + K K+M K KKA+EAE ALF EALL KK T K GK A + ++A ++ +E E TLED IE +R K E K QGT V E+ A WK ++ ++ E R+KV+AE KKK GKGL+ILSGR L++Y LF D D D KQ +D KV+ LF EGDD+DLDDLDDD
Sbjct: 13 KKTEQKKKNKIIEDRTFGLKNKNKSKKVQQHIQSVTKQVMSVDRRTRMEEEKRKQMRKDHKLRKKAEEAERNALFGEALLAVKKKKTTNQKDGKQEAKGRDGNDESAKKGTSRAMKMMYQMDAQEMEDRLKEDPNYVPTLEDEIESERQKKVAELKKSGQGTKVTPESFAAWKEKKRKRRAEEARKKVEAEFKKKKGGKGLAILSGRDLFEYKRELF--DKDLEDGAADKQVDDV----------------------------AAKVQSDLFLEGDDDDLDDLDDD 268
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: A0A6T7LTW9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T7LTW9_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.690e-25 Identity = 105/293 (35.84%), Postives = 150/293 (51.19%), Query Frame = 1
Query: 13 QQKGKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSV---NSTEQQRASDAAKSKKMASKEA-KKAQEAELAALFDEALLT--------GVKKGGTAGKGKTPAVAVETK---AKQVQETFVIEEGEK------------TLEDMIEEQRTKLHRE----GKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLFEDDADAVDNDTMKQRNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVKVEEALFEGDDEDLDDLDD 798
+++ KKA KK++L++DKTFGLKNKNKS VQ Y+ + ++S+ + + R DA K ++ +++A KKA+EAE AALF EAL+ G K G KG+ E K ++ ++ F ++ E TLED +E QR K RE G +GTPV QET W+ ++ +K A ++ V+ EMKKK GKGLS+LSGR LY+Y LF+D D + N +KVE+ LF D+DLDDL+D
Sbjct: 10 EKESKKAAQKKKEKLLDDKTFGLKNKNKSSKVQAYVKSTERSILNAGTDARTRQMDAQKKEQAKARKALKKAKEAEQAALFGEALMAVSKKGPKFGAKAGKVEAKGRDGGDENEKKGGTSRAMKMMFQMDAQEMEDKLREDPNYVPTLEDEVESQRQKKLRELKASGVKGTPVTQETFKVWQDKKRKRKEAATKKMVEKEMKKKKGGKGLSVLSGRELYNYKKDLFQDQEGDDGGDNVVDVN-------------------------AAAEVALKVEQDLFLEGDDDLDDLED 277
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: A0A7S1BEE4_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BEE4_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.880e-25 Identity = 88/237 (37.13%), Postives = 140/237 (59.07%), Query Frame = 1
Query: 13 QQKGKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNST---EQQRASDAAKSKKMASKEAKKAQEAELAALFDEALL-----TGVKK----------GGTAGKGKTPAVAV----ETKAKQVQETFVIE-EGEKTLEDMIEEQRTK----LHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLFEDDADAVDNDTMKQR 642
+Q+ KA K +L+EDKTFG+KNK+KS VQ + ++ ++ ++ ++++ ++ K KK A+K +KA + E ALF EAL+ T VKK GG A KT + A+ + AK++++ F + + TLED IE QR L + G++GTP+ +E+L W+ ++ +K E ++ V+ E+KKK GKGLS+LSGRALY Y+ LF DD +A D + + +R
Sbjct: 9 EQQSSKAANKAKAKLVEDKTFGMKNKSKSSKVQAQVRSITNNIMNSGDPKERKRAEMLKQKKSAAKAMRKAADQEREALFGEALMAVSKKTSVKKKGENSAIGRDGGDAASKKTTSRAMKMMYQMDAKELEDKFKDDPDYVPTLEDEIESQRQAKLKALEKSGRKGTPITEESLKAWQERKRRRKAEEAKKLVETELKKKKGGKGLSVLSGRALYSYNKKLFVDDENAEDKNDIAER 245
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: A0A7S2R4K8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4K8_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.220e-24 Identity = 97/253 (38.34%), Postives = 137/253 (54.15%), Query Frame = 1
Query: 4 PPKQQK-GKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTEQQRASDAAKSKKMASKEAKKAQEAELAALFDEAL--LTGVKKGGTA-GKGKTPAVAVETKAKQVQET-----FVIEE-----------------------------GEKTLEDMIEEQRTKLHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLFEDDADAVDNDTMKQRND 648
PPK+ K KK+ + +K ++IEDKTFGLKNK KSK+VQKYI +V +V + + + +K A+K AK + EL LF+EAL G KK T K K A A++ A Q+ F+ +E TLE +IE QR K+ EG+ GTPV +ETLAKW+ DR ++ +V AE++KK GKGL++LSG+ L+ YD +LF DD +A D D ++ +D
Sbjct: 2 PPKKNKESKKSESKRKDKIIEDKTFGLKNKKKSKTVQKYIQSVTSNVKNGRGAAEEEKRRQEKKAAKIAKMQADEELRILFNEALDGSLGPKKAKTKKDKQKEQAAALKKDAADSQKNLKDYPFIADEMLAMTGMLNELSPQELEEELQTFIRTGVSTRLTLEQVIELQRAKMRSEGRVGTPVTEETLAKWREDRAERRRQANAERVAAELRKKKGGKGLAVLSGKDLFTYDRSLFVDD-EAADIDEYERTSD 253
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Match: A0A7S1U4V3_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4V3_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.750e-24 Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 1
Query: 28 KAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTEQQRA---SDAAKSKKMASKEAKKAQEAELAALFDEALLTGVKKGGTAGKGKTPAVA---VETKAKQVQETFVIEEGEK--------TLEDMIEEQRTKLHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSILSGRALYDYDATLFEDDADA 615
K A ++ ++IEDKTFGLKNK KSK VQ+Y++ V+K V S+ +QR + ++++ A++ AK+A+E EL +F +L GV G G G+ A E KA + EE K T+ + IE R +LH G+ GTPV ET AKWKADR A A+ KV+ E+KK +GKGLS+L+GR L++ + LF DDA+A
Sbjct: 59 KGEAKRQNKVIEDKTFGLKNKKKSKKVQQYVNRVKKQVQSSGRQRGFKTDEEKQAERKAARLAKQAEEKELREIFATSLDGGVI-GAPKGSGRRKRSAKQRAEAKAVEXXXXXXEEEAAKAVDPYAGMTVVERIEAMREELHMRGETGTPVTAETFAKWKADRAAAAKAQAEEKVEKELKKGARGKGLSVLTGRELFEVRSELFRDDANA 267 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7486.18673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7486.18673.1 >prot_Ecto-sp13_S_contig7486.18673.1 ID=prot_Ecto-sp13_S_contig7486.18673.1|Name=mRNA_Ecto-sp13_S_contig7486.18673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp QPPKQQKGKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYISTVQKSVNSTback to top mRNA from alignment at Ecto-sp13_S_contig7486:3..5412- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7486.18673.1 ID=mRNA_Ecto-sp13_S_contig7486.18673.1|Name=mRNA_Ecto-sp13_S_contig7486.18673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7486:3..5412- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7486:3..5412- >mRNA_Ecto-sp13_S_contig7486.18673.1 ID=mRNA_Ecto-sp13_S_contig7486.18673.1|Name=mRNA_Ecto-sp13_S_contig7486.18673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7486:3..5412- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |