mRNA_Ecto-sp13_S_contig7433.18615.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7433.18615.1
Unique NamemRNA_Ecto-sp13_S_contig7433.18615.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7433.18615.1 vs. uniprot
Match: D8LHV9_ECTSI (Putative: silimar to centromere/kinetochore protein zw10 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV9_ECTSI)

HSP 1 Score: 725 bits (1872), Expect = 2.350e-255
Identity = 398/431 (92.34%), Postives = 402/431 (93.27%), Query Frame = 1
Query:    1 QDLKGEVQTLARVLDSNSSSLASLTADSLADVNRLADQASRCKEAIGALDGLCQAEDFLNSSQSLLAKNEYVQAADAVASAEVLLGDLQLVEEASANRGGRAGGGVDKENRRNGYGTGGEDSGVLRAVKRLLLKRRAALESHLRDLVQEALQLGPTTRCRKLFSGYLCDRYFRSAVPLVDVFEALGRLGQLDALFSEISEKLRKSVVAPLLFARHVPPPKRVSDVDSASLTYAPAPASGISAGGASASPGASGSPSKEEGGKEGGPGMVSELLGRVTVVLEFMHEEVLGGQAHLTSAFGLQLMCDPDGLSKILLNKLEDHIPHSAHQLPDFGRGARDACYLFEDRLCEMGYYADDNAASASQQKAAVRGNLCRFVETLDGRFSAKRRRTLLQQARDLALGDYHNTVEVSDALEGGASSDEASSEGVTSAKG 1293
            QDLKGEVQTLARVLDSNSSS+ASLTADSLADVNRLADQASRCKEAIGALDGLCQAEDFLNSSQSLLAKNEYVQAADAVASAEVLLGDLQ  E ASANRGGRAGGGVDKENRRNG GTGG DSGVLRAVKRLLLKRRAALESHLRDLVQEALQLGPTTRCRKLFSGYLCDRYFRSAVPLVDVFEALGRLGQLDALFSEIS KLRKSVVAPLL ARHVPPPKRVSD DSASLTYA            SASPGASG PSKE GGKEGGPGMVSELLGRVTVVLEFMHEEVLGG+AHLTSAFGLQLM DPDGLSKILLNKLEDHIPHSA QLPDF RGARDACYLFEDRLCEMGYYA DNAA  +QQKAAVRG LCRFVET+DGRFSAKRRRTLLQQARDLALGDYHNTVEVSDALEGGASSDEASSEGVTSAKG
Sbjct:   57 QDLKGEVQTLARVLDSNSSSVASLTADSLADVNRLADQASRCKEAIGALDGLCQAEDFLNSSQSLLAKNEYVQAADAVASAEVLLGDLQRAEAASANRGGRAGGGVDKENRRNGSGTGG-DSGVLRAVKRLLLKRRAALESHLRDLVQEALQLGPTTRCRKLFSGYLCDRYFRSAVPLVDVFEALGRLGQLDALFSEISGKLRKSVVAPLLSARHVPPPKRVSDADSASLTYAXXXXXXXXXXXXSASPGASGFPSKEGGGKEGGPGMVSELLGRVTVVLEFMHEEVLGGRAHLTSAFGLQLMSDPDGLSKILLNKLEDHIPHSAQQLPDFERGARDACYLFEDRLCEMGYYASDNAAPVNQQKAAVRGKLCRFVETVDGRFSAKRRRTLLQQARDLALGDYHNTVEVSDALEGGASSDEASSEGVTSAKG 486          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7433.18615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHV9_ECTSI2.350e-25592.34Putative: silimar to centromere/kinetochore protei... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7433contigEcto-sp13_S_contig7433:2..6048 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score733.0
Seed ortholog evalue7.9e-209
Seed eggNOG ortholog2880.D8LHV9
Preferred nameZW10
Model size1293
KEGG koko:K10481,ko:K11578,ko:K14809,ko:K21122
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000132,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000779,GO:0000793,GO:0000819,GO:0000910,GO:0000922,GO:0000940,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005783,GO:0005794,GO:0005795,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0006810,GO:0006888,GO:0006890,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007059,GO:0007060,GO:0007080,GO:0007088,GO:0007093,GO:0007094,GO:0007096,GO:0007107,GO:0007112,GO:0007140,GO:0007163,GO:0007276,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010256,GO:0010324,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0012505,GO:0015630,GO:0016043,GO:0016192,GO:0017016,GO:0017137,GO:0019237,GO:0019899,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030010,GO:0030071,GO:0031267,GO:0031577,GO:0031984,GO:0032501,GO:0032504,GO:0032506,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033206,GO:0033365,GO:0034501,GO:0034502,GO:0034613,GO:0036063,GO:0036090,GO:0040001,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043565,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045132,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0046907,GO:0048193,GO:0048232,GO:0048285,GO:0048519,GO:0048523,GO:0048609,GO:0050000,GO:0050789,GO:0050794,GO:0051020,GO:0051128,GO:0051129,GO:0051179,GO:0051233,GO:0051234,GO:0051276,GO:0051293,GO:0051294,GO:0051301,GO:0051303,GO:0051310,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0061024,GO:0061640,GO:0065003,GO:0065007,GO:0070727,GO:0070939,GO:0071173,GO:0071174,GO:0071459,GO:0071840,GO:0097159,GO:0098687,GO:0098791,GO:0098813,GO:0099023,GO:0099024,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:0140014,GO:1901363,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902850,GO:1903046,GO:1903047,GO:1905818,GO:1905819,GO:1990423,GO:1990837,GO:2000816,GO:2001251
Exons10
EggNOG free text desc.spindle assembly checkpoint
EggNOG OGsKOG2163@1,KOG2163@2759
EC3.4.19.12,3.6.4.13
Cds size1293
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03009,ko03036,ko04121,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7433.18615.1prot_Ecto-sp13_S_contig7433.18615.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7433 2..6048 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464012.3493397-CDS-Ecto-sp13_S_contig7433:1..221681464012.3493397-CDS-Ecto-sp13_S_contig7433:1..22Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 2..22 -
1681464012.3604283-CDS-Ecto-sp13_S_contig7433:320..3711681464012.3604283-CDS-Ecto-sp13_S_contig7433:320..371Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 321..371 -
1681464012.371556-CDS-Ecto-sp13_S_contig7433:1291..13701681464012.371556-CDS-Ecto-sp13_S_contig7433:1291..1370Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 1292..1370 -
1681464012.383972-CDS-Ecto-sp13_S_contig7433:1734..18771681464012.383972-CDS-Ecto-sp13_S_contig7433:1734..1877Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 1735..1877 -
1681464012.395132-CDS-Ecto-sp13_S_contig7433:2278..24191681464012.395132-CDS-Ecto-sp13_S_contig7433:2278..2419Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 2279..2419 -
1681464012.4059627-CDS-Ecto-sp13_S_contig7433:3254..34521681464012.4059627-CDS-Ecto-sp13_S_contig7433:3254..3452Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 3255..3452 -
1681464012.4165456-CDS-Ecto-sp13_S_contig7433:3892..40691681464012.4165456-CDS-Ecto-sp13_S_contig7433:3892..4069Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 3893..4069 -
1681464012.4298391-CDS-Ecto-sp13_S_contig7433:4946..50741681464012.4298391-CDS-Ecto-sp13_S_contig7433:4946..5074Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 4947..5074 -
1681464012.4466634-CDS-Ecto-sp13_S_contig7433:5353..55461681464012.4466634-CDS-Ecto-sp13_S_contig7433:5353..5546Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 5354..5546 -
1681464012.4600081-CDS-Ecto-sp13_S_contig7433:5886..60481681464012.4600081-CDS-Ecto-sp13_S_contig7433:5886..6048Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7433 5887..6048 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7433.18615.1

>prot_Ecto-sp13_S_contig7433.18615.1 ID=prot_Ecto-sp13_S_contig7433.18615.1|Name=mRNA_Ecto-sp13_S_contig7433.18615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=431bp
QDLKGEVQTLARVLDSNSSSLASLTADSLADVNRLADQASRCKEAIGALD
GLCQAEDFLNSSQSLLAKNEYVQAADAVASAEVLLGDLQLVEEASANRGG
RAGGGVDKENRRNGYGTGGEDSGVLRAVKRLLLKRRAALESHLRDLVQEA
LQLGPTTRCRKLFSGYLCDRYFRSAVPLVDVFEALGRLGQLDALFSEISE
KLRKSVVAPLLFARHVPPPKRVSDVDSASLTYAPAPASGISAGGASASPG
ASGSPSKEEGGKEGGPGMVSELLGRVTVVLEFMHEEVLGGQAHLTSAFGL
QLMCDPDGLSKILLNKLEDHIPHSAHQLPDFGRGARDACYLFEDRLCEMG
YYADDNAASASQQKAAVRGNLCRFVETLDGRFSAKRRRTLLQQARDLALG
DYHNTVEVSDALEGGASSDEASSEGVTSAKG
back to top

mRNA from alignment at Ecto-sp13_S_contig7433:2..6048-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7433.18615.1 ID=mRNA_Ecto-sp13_S_contig7433.18615.1|Name=mRNA_Ecto-sp13_S_contig7433.18615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7433:2..6048- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGATCTCAAAGGAGAGGTGCAAACCCTTGCGAGGGTGCTCGACAGCAA CAGCTCATCGCTGGCGTCACTCACGGCCGACAGCCTCGCAGACGTGAACA GGCTGGCGGACCAGGCCTCTCGGTGCAAGGAAGCCATCGGCGCTCTTGAT GGGCTGTGTCAGGTGGGGGCGGCTTTTGTTGTTGAGTGTTGTGCGCTATT ACTGTATTTTGTTGATAAATTGTTGCATATGTTGTTGTTGTTTTCATTGT TGTACTGTTTTCGGTATTGTTGTTGATGTTGTTGTGGCTGTCGTCTGTCG TTGTTGTTCTTGCTGTTGTCATTGGTGCTGCCAAAGGGGTTTTTCGATAC CGGTATTTTTTCAAGTCTCAACACCGATGGAGCATACGGGACGTACTTCT AATCGATTCCCGCTTCGATACGGTTGAGCACGACATTTGTCGCTTCTCGT CGCGGCGACATTTCCGAAAAAAAAATCACCGAAAGCGATTTTTACCTGGC AGGCGGAGGATTTCCTGAACTCGTCGCAGTCTCTCCTAGCCAAGAACGAG TACGTTCAAGCGGCCGATGCAGTGGCAAGCGCCGAGGTGCTCCTGGGCGA CCTCCAGCTAGTGGAAGAGGCGAGCGCAAACCGAGGGGGAAGAGCTGGGG GTGGGGTCGACAAGGAGAACCGGCGGAACGGTTACGGAACAGGTGGTCGA TGTTCTTTGGCAGAGAAGACCCGAATCCGCAGGAAGTTTTGCTACTGGTG TTGTGTCTTTGTTATTCGCAAAATTCAGGGGGGACGGCGAGAAACCCTCC AGGCAACCCACTTGTTGACGGCGTAGTATGGTCAGCAAGCAAAGTGCCTG TGTTCCGACGACGTGCAGGAATTTAGTTCGTGCAAGTGCACCCCAGAATA GCGACTGTTTTCTTGGAGGATGCTGTACTTCTGTCGTGCCGCCGACCCGA TTTTGTTGCTTGTTGTTGGCGCAGGGGAGGACAGCGGCGTCCTCCGCGCC GTGAAGCGCCTTCTCCTGAAGAGGAGGGCCGCGCTGGAGAGCCACCTTCG AGACCTGGTGCAGGAGGCCCTTCAGCTGGGACCCACCACTCGCTGCCGGA AGGTACCATACCTCTATGTTTCAGCCTAGATTGCAACCGCCTTTTTTTAT TGGGTGCAGTTTGGATGAGTCTGCGATGATGTGGCTGGCAGTCTTGTGTG CAGGTGGTCTGCGTTTGTGGACCGTGTGTTTAGTCTGTGCTGGTTTTTCG GAGTTCGATGCGCTAACCGACTGACCCGTGCGAGAGGCATTGTATTTGCA GGAGGGGCAACAGGCGAGGAACTCGAAACGCCGCATCGGCGTACGTGCCT GACTGGTAGCTTTTTACAATGGCGTGGCAAGAACTGGAGGATCGTTTGAA GTGTCTACTGCAGTTTGTTTGCCGCTATAGAATGAATCAACGTAAGACGC TACAGGAGCAGCCTGATATACAGTAGTGGTGTGGCAACTTGAATAGTGGA ACTGCCGATCGACATAGTAGTATCAAAATCTCTTTTCACAGTCTCAACAT GTGCATGAACCCTATACTTCGAGTAGCGGCACTGCCCCGAACAGTGGCAC ATTCTCCTCTTGCCCCTACATGCCACTACACCGGGCTGCTACCGTATCAT GAAAGTAGTGTCCTGTTGGGAGGGAAATGTTGTTTTTCACGATACGCGCA GAAATTGTTGGGAACACGCGAGACGGGGGGACACCGATCAGGTGACGTTC TTAGACTATCATTCAGGGCGCGGCTACGACTACGTCATGCTGTTGCCGTG CCTTGGTACAACATTGTATTTTGTTCCGCTCGCGACCTCCAACGGTGCCA CGTTCGCTATCCCCCGAGATCTTCAAGACCAAGAAATCACACAATTGACA TGGGCACCGATGTCGTTTCCCCCTTGCGCCCGTCCTCTCCTGAAACGCCT ATATTTTTTTGTTGTTGTTTTTGCACCAGTTATTCTCCGGGTACCTATGC GATCGTTATTTCCGATCGGCGGTGCCCCTCGTCGACGTGTTCGAGGCCCT CGGGAGGCTGGGCCAGCTCGACGCCCTGTTCTCGGAGATTTCGGAGAAGC TGAGGAAGAGCGTCGTCGCGCCCCTCTTGTTTGCTCGTCACGTACCCCCT CCGAAGGTGCGCAAGCCCCGCGTGCTTGTGGCGCATAGTAAAAAAATAGT TACAAGAAAGCACCGTTCCGATCTCTCTATCCAGTACCTTTTGTCCGTAC TGGTCGAACACTTGACGCGGTCGATTCCCGTGGTCACAGACTGACTTACA CCAAATAACAGTGGAGATCCAAGCCACGGGGCATGGAGTAGGCGCACTCT AAAACCAAGTGAAAGTGAAAATTTCCCCTTTTCTTCCGACCTCGTCGATA GGCAGGTGTCTTCTGTGCTCTTGTTGGTTCACCCTCTCCATGTGGGGTAG TTTTTTGCAGACTTCGGCTGTTGGTTGGAGGGGCAGCCATTCTCCGTATC ATGCCATGGAGCGGGTTGGGTTGGATGCCGTTTGACAACAACTCGACCCC GTTTGCAATCTAACTTCCGTACCTATTTTTTTTGTTGACCAATCAGCGAG TTTCGGACGTGGACTCGGCTTCGCTGACTTACGCTCCCGCCCCAGCCAGC GGGATCAGCGCCGGTGGAGCATCGGCGAGTCCCGGCGCAAGCGGGTCTCC ATCGAAGGAGGAGGGGGGTAAGGAAGGGGGCCCCGGGATGGTGTCGGAGC TGCTGGGTCGTGTTACGGTTGTGCTGGAGTTTATGCACGAAGAGGTGAGA GTGTGTGTCAGAGAGAGAGAGAGAGAGAGAGAGAAAGGTGGGGGGGGGCG GGGGAGGAGCAACACAGAGGAAGTCAGGCAGACGAACGCACAGACAGACA GATGCAGACAGACGGACAGGTGAGAGAGAGAGAGCGAGACGATGGTAGGC AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGGGAGGGAGAGGGAAAG ACAGTCTGTTGTTTCTTAACGTCAGCCCATCATCAACGTTCTTTGCAGGG AACTTCAATATGTAATGGAAACGTGGACGTGCTACGCAGGTTTCGATGTG GCAAAACACCGAAATGCGCATGCCGGCCTTGTGTTTTTTGCTTTTTTTTT AAATTGGCCTTGTATTTCGGTACAGCGGGGATTCGTTTCGCAACGAAGTG AGTCTTGTCTTGAGCAAGAGCGGTGCCGCAAGGGGGGTAATTCGTCATTT GGTAGCATTTCTTCGAGTAGTAGGTGTTTTGGCTGTGCTTCTTTGACCAC GTGTTCTGTATTGTTTCTCTATTACTCTGCTTTCCAACGGTGTCATGGAG TAGATGGGCAATGGTCGCGTTTGTTCCAGGTAGTGGCGCCAGGTCGGATC GAGGAGGGTGGGTCATGGCATGTCATTCATTTGGCCTCCGTCGTGCAGCG TGGATGTTCAGCGAGTGCCCCTTGTACTTGGAGAGCGATAGACGCTCTTT TCGTACGTCCCACTGTTTTGTTCTTTTTTCGGTTGATTATTTTTCATACA GTCCATGTTCGTGCCCCCTCATTGCCGCAACTTGGTCGGTTCATTCGTTT GTGATTCGGCTCCGATTTCGCACGTGTAGGTTTTAGGGGGACAGGCGCAC CTGACTTCCGCGTTCGGCTTGCAGCTGATGTGTGACCCTGATGGGCTGAG CAAGATTCTCCTCAACAAGCTGGAGGACCACATCCCGCATAGCGCACACC AGCTGCCAGACTTCGGACGGGTGAATTTCGTGTTTCTTTTTTGAGTGGAA CTTTCGACAATATTCTTAAGGCGCCGTCTACCGTAATATTGTACCCTGTA AAGTCGAAGCTGTCTTTCCAAATCCGCGGTACTTGGGTTTGATTTCTCTC TTGATCGTGTCTCCACCTGAGTTTATCCTTTCTGCAAGCTCCAACGATAG CGTCTCGGACATTGTTCATCACAAGCTATCCTATCGACGGCCGTATCCTC CGCGCACCTGCGTGGGTTTTAGGGACACCGGAGCTTTCCTCGTGGAGGAG ATAGGCGTCAAGCTCGTCTTCTTGTCAATGGCCAGGCGGGTGGAAACAAA ATATCCCGATGCGGCCGAACACGTCACTCATTTCCCTCTCAAACACACGA AATATCGCATCCCTATCACAGGGAGCGCGCGACGCTTGCTACCTCTTCGA AGATCGTCTCTGCGAGATGGGCTACTACGCGGACGACAACGCTGCGTCGG CCAGCCAGCAGAAAGCCGCCGTGCGGGGGAACCTGTGCCGCTTCGTTGAA ACCCTCGACGGGAGGTGAAAGTCCAGGCGTGCGGGCGAGCTTCCCGCTGG CTTGTTGTCAGTGCCCAGGCACACCGACCAAGTCTTACGTGTCGTATTTA CTCCCTTCTCTTCCTTTTTGTGCTCCGCATTTTTTTTCCTGGCGTTCGTG AAACAATGGCATCCGTTTGGGAATTCGAACCCTCATTTATTGCGATGTCT TGTGCTTTCTGATTCGGCAAGGGTTTTGGCGAACCGAAGGGCGCTCGCTC TCCCAAACACGACGTGACCCTTTTTTTTTTTTGTTCCTCCTTTCGCTTTT GGTTGCTCGGGTTTTGCGTGACTGTCAAGGCGGCATCTGAAGAAGTTTCT CACTTTCCTGCCCATATTTTTTGTTCAGGTTTTCGGCGAAGCGCAGAAGA ACTCTCCTTCAGCAGGCTCGCGACCTGGCCCTAGGGGATTACCACAACAC TGTCGAGGTGGAAGTGGATGTCGATTTCTGTCCAATTTTTCATATTTCGA TCCAGAGTTGTGCAGAGTTCAGAGCTGTTTCACCTACAGGCTTGTATAAG GCAATCCCCAATTCAGCACCAACTAAATAGGGCAGTATTATAGAGTTTTC ATTCGCACTGAGAGGAAGTGAATGTTACATGGAGGTGTCACCCCCGCAGA AAGGAAGCCGAATGAAATGGTTTCTCTCCATTCGGCGTCGTTACCTAGAA CAGAAGAAGCAGAGTGCAGGGATGTACCATGTGCTTTTTTGTATCTTCCT GCTGTAAAGTGGCAGTCATTGAGTAATGTGATTCCGCATGTTAATTCCCT GCTACTTCGATACAGCCTAGAATATGGTTGTCGTAGTTATCGATTCGTTC GAATGATGTTCACTTATCGATTGAATCGTGTATGTATCGTAGCTTTTTTG TGTCGTGTGTTTCGTTACCGCAGCCGGAGTGAACTACGTTACCCGTAAAG TATGCCTTCGACTTTTACGTTTAACGCTCCCCAACGAGAAGGGGCCAACG CGGAAGCGGTTGGTCCTGGAACATCTCGTTGAGAGAGAGCTTTCCTCACG TTCTTCTGCCGGGTTTGACGATAACTCTCTTGCCCTTTTGCTCGTGGAGC AATCGAGAATTTTTTTTCGGTCCGTACCCTGACGGTTCTTACGCGTTTTT TTGGGGCTCTACTGTCCCTGCGTCTTCAAGAATCCTACTGCCACAGTGCA AGTAATGTTGTTGTCCCTCACCGTACATCATTGTTTTACTTTTGTACCAA GATAAGACACCATGTAGCAGATGAGTGTAAATGATGCTGGCTCCCGTTCA CCATCATCTGCCCGCGTCTATCTAACCTGCACCTGTTCTACGCATCGGTG TCGATCGACGCATGTTCCTGTCGTAAGGTTTCCGATGCCCTGGAAGGCGG TGCTTCGTCCGACGAGGCTTCTTCCGAGGTGAGTATTGACGGTACCAATA CCTCGGGAGGCCACAATCGTTTGGAGTTTCCAGGGGTTTTCGCTGGGTTC TTCCTAACATCATGGTGTATACATGTAGTTGCCTCTCGTTCTGCTGTTGC ATGTTTTGTGTAATTTTTTAACAAAAAAAAGAGAAATTCCGTCGGAGTGC TGAGCGCGTCCGTTTGCAAACGGGAGGCACGTTGCGCCCCAACGAGCACA AGGCGGTTTTGCTGGTCGGTGGCAAACAACGCCAACCTTGACCTGAACCC ACCGTTTCACTTGGCTCACTTGCCAGGGTGTGACATCAGCGAAGGGT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7433:2..6048-

>mRNA_Ecto-sp13_S_contig7433.18615.1 ID=mRNA_Ecto-sp13_S_contig7433.18615.1|Name=mRNA_Ecto-sp13_S_contig7433.18615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1293bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7433:2..6048- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGATCTCAAAGGAGAGGTGCAAACCCTTGCGAGGGTGCTCGACAGCAA
CAGCTCATCGCTGGCGTCACTCACGGCCGACAGCCTCGCAGACGTGAACA
GGCTGGCGGACCAGGCCTCTCGGTGCAAGGAAGCCATCGGCGCTCTTGAT
GGGCTGTGTCAGGCGGAGGATTTCCTGAACTCGTCGCAGTCTCTCCTAGC
CAAGAACGAGTACGTTCAAGCGGCCGATGCAGTGGCAAGCGCCGAGGTGC
TCCTGGGCGACCTCCAGCTAGTGGAAGAGGCGAGCGCAAACCGAGGGGGA
AGAGCTGGGGGTGGGGTCGACAAGGAGAACCGGCGGAACGGTTACGGAAC
AGGTGGGGAGGACAGCGGCGTCCTCCGCGCCGTGAAGCGCCTTCTCCTGA
AGAGGAGGGCCGCGCTGGAGAGCCACCTTCGAGACCTGGTGCAGGAGGCC
CTTCAGCTGGGACCCACCACTCGCTGCCGGAAGTTATTCTCCGGGTACCT
ATGCGATCGTTATTTCCGATCGGCGGTGCCCCTCGTCGACGTGTTCGAGG
CCCTCGGGAGGCTGGGCCAGCTCGACGCCCTGTTCTCGGAGATTTCGGAG
AAGCTGAGGAAGAGCGTCGTCGCGCCCCTCTTGTTTGCTCGTCACGTACC
CCCTCCGAAGCGAGTTTCGGACGTGGACTCGGCTTCGCTGACTTACGCTC
CCGCCCCAGCCAGCGGGATCAGCGCCGGTGGAGCATCGGCGAGTCCCGGC
GCAAGCGGGTCTCCATCGAAGGAGGAGGGGGGTAAGGAAGGGGGCCCCGG
GATGGTGTCGGAGCTGCTGGGTCGTGTTACGGTTGTGCTGGAGTTTATGC
ACGAAGAGGTTTTAGGGGGACAGGCGCACCTGACTTCCGCGTTCGGCTTG
CAGCTGATGTGTGACCCTGATGGGCTGAGCAAGATTCTCCTCAACAAGCT
GGAGGACCACATCCCGCATAGCGCACACCAGCTGCCAGACTTCGGACGGG
GAGCGCGCGACGCTTGCTACCTCTTCGAAGATCGTCTCTGCGAGATGGGC
TACTACGCGGACGACAACGCTGCGTCGGCCAGCCAGCAGAAAGCCGCCGT
GCGGGGGAACCTGTGCCGCTTCGTTGAAACCCTCGACGGGAGGTTTTCGG
CGAAGCGCAGAAGAACTCTCCTTCAGCAGGCTCGCGACCTGGCCCTAGGG
GATTACCACAACACTGTCGAGGTTTCCGATGCCCTGGAAGGCGGTGCTTC
GTCCGACGAGGCTTCTTCCGAGGGTGTGACATCAGCGAAGGGT
back to top