prot_Ecto-sp13_S_contig7433.18615.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7433.18615.1
Unique Nameprot_Ecto-sp13_S_contig7433.18615.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length431
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7433.18615.1 vs. uniprot
Match: D8LHV9_ECTSI (Putative: silimar to centromere/kinetochore protein zw10 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV9_ECTSI)

HSP 1 Score: 725 bits (1872), Expect = 2.350e-255
Identity = 398/431 (92.34%), Postives = 402/431 (93.27%), Query Frame = 0 
Query:    1 QDLKGEVQTLARVLDSNSSSLASLTADSLADVNRLADQASRCKEAIGALDGLCQAEDFLNSSQSLLAKNEYVQAADAVASAEVLLGDLQLVEEASANRGGRAGGGVDKENRRNGYGTGGEDSGVLRAVKRLLLKRRAALESHLRDLVQEALQLGPTTRCRKLFSGYLCDRYFRSAVPLVDVFEALGRLGQLDALFSEISEKLRKSVVAPLLFARHVPPPKRVSDVDSASLTYAPAPASGISAGGASASPGASGSPSKEEGGKEGGPGMVSELLGRVTVVLEFMHEEVLGGQAHLTSAFGLQLMCDPDGLSKILLNKLEDHIPHSAHQLPDFGRGARDACYLFEDRLCEMGYYADDNAASASQQKAAVRGNLCRFVETLDGRFSAKRRRTLLQQARDLALGDYHNTVEVSDALEGGASSDEASSEGVTSAKG 431
            QDLKGEVQTLARVLDSNSSS+ASLTADSLADVNRLADQASRCKEAIGALDGLCQAEDFLNSSQSLLAKNEYVQAADAVASAEVLLGDLQ  E ASANRGGRAGGGVDKENRRNG GTGG DSGVLRAVKRLLLKRRAALESHLRDLVQEALQLGPTTRCRKLFSGYLCDRYFRSAVPLVDVFEALGRLGQLDALFSEIS KLRKSVVAPLL ARHVPPPKRVSD DSASLTYA            SASPGASG PSKE GGKEGGPGMVSELLGRVTVVLEFMHEEVLGG+AHLTSAFGLQLM DPDGLSKILLNKLEDHIPHSA QLPDF RGARDACYLFEDRLCEMGYYA DNAA  +QQKAAVRG LCRFVET+DGRFSAKRRRTLLQQARDLALGDYHNTVEVSDALEGGASSDEASSEGVTSAKG
Sbjct:   57 QDLKGEVQTLARVLDSNSSSVASLTADSLADVNRLADQASRCKEAIGALDGLCQAEDFLNSSQSLLAKNEYVQAADAVASAEVLLGDLQRAEAASANRGGRAGGGVDKENRRNGSGTGG-DSGVLRAVKRLLLKRRAALESHLRDLVQEALQLGPTTRCRKLFSGYLCDRYFRSAVPLVDVFEALGRLGQLDALFSEISGKLRKSVVAPLLSARHVPPPKRVSDADSASLTYAXXXXXXXXXXXXSASPGASGFPSKEGGGKEGGPGMVSELLGRVTVVLEFMHEEVLGGRAHLTSAFGLQLMSDPDGLSKILLNKLEDHIPHSAQQLPDFERGARDACYLFEDRLCEMGYYASDNAAPVNQQKAAVRGKLCRFVETVDGRFSAKRRRTLLQQARDLALGDYHNTVEVSDALEGGASSDEASSEGVTSAKG 486
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7433.18615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHV9_ECTSI2.350e-25592.34Putative: silimar to centromere/kinetochore protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12205CENTROMERE/KINETOCHORE PROTEIN ZW10coord: 5..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7433contigEcto-sp13_S_contig7433:2..6048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7433.18615.1mRNA_Ecto-sp13_S_contig7433.18615.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7433 2..6048 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7433.18615.1 ID=prot_Ecto-sp13_S_contig7433.18615.1|Name=mRNA_Ecto-sp13_S_contig7433.18615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=431bp
QDLKGEVQTLARVLDSNSSSLASLTADSLADVNRLADQASRCKEAIGALD
GLCQAEDFLNSSQSLLAKNEYVQAADAVASAEVLLGDLQLVEEASANRGG
RAGGGVDKENRRNGYGTGGEDSGVLRAVKRLLLKRRAALESHLRDLVQEA
LQLGPTTRCRKLFSGYLCDRYFRSAVPLVDVFEALGRLGQLDALFSEISE
KLRKSVVAPLLFARHVPPPKRVSDVDSASLTYAPAPASGISAGGASASPG
ASGSPSKEEGGKEGGPGMVSELLGRVTVVLEFMHEEVLGGQAHLTSAFGL
QLMCDPDGLSKILLNKLEDHIPHSAHQLPDFGRGARDACYLFEDRLCEMG
YYADDNAASASQQKAAVRGNLCRFVETLDGRFSAKRRRTLLQQARDLALG
DYHNTVEVSDALEGGASSDEASSEGVTSAKG
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