prot_Ecto-sp13_S_contig7422.18602.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7422.18602.1
Unique Nameprot_Ecto-sp13_S_contig7422.18602.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: D8LFH4_ECTSI (Short-chain dehydrogenase/reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFH4_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 1.240e-133
Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0
Query:    1 VTLGQRGCTVYVTGRSVGGNTTDKARQREIGGSLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYSFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTEKMKSLMTKSPAEFEAN 208
            VTLGQRGCTVYVTGRSVGGNTTDK    EIGGSLEETAAEIEAAGGKGIPVACDHAKD+QVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGL YSFNVAYGVGKAGVDRLAKDMA+ELEEEKVAVVS+YPGIVKTEKMKSLMTK+PAEFEAN
Sbjct:  107 VTLGQRGCTVYVTGRSVGGNTTDK----EIGGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLAYSFNVAYGVGKAGVDRLAKDMAIELEEEKVAVVSVYPGIVKTEKMKSLMTKNPAEFEAN 310          
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: D8LFI0_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI0_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 4.300e-96
Identity = 144/152 (94.74%), Postives = 148/152 (97.37%), Query Frame = 0
Query:    1 VTLGQRGCTVYVTGRSVGGNTTDKARQREIGGSLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYSF 152
            VTLGQRGCTVYVTGRSVGGNTTDK    EIGGSLEETAAEIEAAGGKGIPVACDHAKD+QVKALFE+VESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHY+ASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYS+
Sbjct:   37 VTLGQRGCTVYVTGRSVGGNTTDK----EIGGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFEKVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYVASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYSW 184          
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: A0A7S3USF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF7_HETAK)

HSP 1 Score: 206 bits (525), Expect = 2.730e-62
Identity = 109/208 (52.40%), Postives = 145/208 (69.71%), Query Frame = 0
Query:    1 VTLGQRGCTVYVTGRSVGGNTTDKARQREIGGSLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKS---VKDRGGKPG-------LIACVSSFGGLTYSFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTEKMKSLM 198
            + L +RG TVY+TGRS+            +GG+L +T AEI+AAGGK IP+ CDHA D+Q +A+FE+V+S +GRLDILVNNAFA+     L   FW QGA+ WD+  TVGLRSHY+ SC A P+M+++   V+   G  G       LI  +SSFGGL+Y+FNVAYGVGKAGVDRL KDM VEL++  ++ VS++PG+V TE+   +M
Sbjct:   50 IALAERGATVYITGRSL------DFPADPLGGTLRQTQAEIQAAGGKCIPIKCDHANDEQTRAVFEQVQSREGRLDILVNNAFAIPKQKDLFTNFWEQGAEIWDACHTVGLRSHYLCSCHAVPVMLQNPPLVQGARGDFGGGRKTNPLIVGISSFGGLSYTFNVAYGVGKAGVDRLIKDMDVELKQHGISTVSLWPGVVLTEQTLKMM 251          
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: A0A8J9X4G2_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X4G2_PHATR)

HSP 1 Score: 193 bits (490), Expect = 2.300e-57
Identity = 108/215 (50.23%), Postives = 142/215 (66.05%), Query Frame = 0
Query:    3 LGQRGCTVYVTGRSVGGNTTDK-------ARQREIGG--SLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQGRLDILVNNAFALGPG--DQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKD--RGGKPGLIACVSSFGGLTYSFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTEKMKSLMTKSPAE 204
            LG++G  VY+TG S   N++         +  +E GG  ++E+TA EI  AGG G+ V C+HA D +VK L +R+E + GRLDIL+NNAF L  G  + L  KFW QG + WD+L TVGLRSH++AS +A PL+  + K+  R      +  VSSFGGLTY+FNV YGVGKAGVDRLAKDMAVEL  E + VVS +PG+V TE+ +  + K   E
Sbjct:   19 LGKQGAIVYITGTSTSDNSSSLNAATGPYSATKESGGPGTIEQTAQEIMNAGGIGVAVLCNHAVDSEVKHLMDRIERDHGRLDILINNAFRLPQGGVEMLYKKFWEQGPEIWDTLHTVGLRSHFVASVYAMPLLQAAKKNPQRNLPRPFVGMVSSFGGLTYTFNVPYGVGKAGVDRLAKDMAVELTPEDICVVSFWPGVVDTERTQESVKKGDWE 233          
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: A0A6U5IRZ3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5IRZ3_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.500e-55
Identity = 107/222 (48.20%), Postives = 142/222 (63.96%), Query Frame = 0
Query:    3 LGQRGCTVYVTGRSVGGNTTDKARQREIG----------------------GSLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQGRLDILVNNAFALGPG--DQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKD--RGGKPGLIACVSSFGGLTYSFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTEKMKSLM 198
            LG+ G TVYVTG S   +  D++R  + G                      G++++TA E+ AAGG GIPV C+HA D+QVK LFE+VE EQGRLDIL+NN F + PG  D L  KFWT G + +D L  VG+RSHY ++ FA PLM++S K   +  +P  I  +SSFGG +Y+FNV YGV K  VDR+AKDMA+EL  E V V+S YPG+V TE+ + ++
Sbjct:    3 LGKEGATVYVTGTS---SRADESRGNKGGRFGLGSKKIQGKYLTNEDVGGPGTVDDTADEVTAAGGLGIPVLCNHADDEQVKQLFEQVEEEQGRLDILINNVFRVPPGGADSLSGKFWTLGMELFDVLHDVGVRSHYASTVFAMPLMLRSRKTSTKLDRP-FIGMISSFGGNSYTFNVPYGVAKGAVDRMAKDMAIELNNEDVCVLSFYPGLVMTERTERMV 220          
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: A0A2D6BHG0_9DELT (Short-chain dehydrogenase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BHG0_9DELT)

HSP 1 Score: 187 bits (474), Expect = 1.540e-55
Identity = 103/204 (50.49%), Postives = 132/204 (64.71%), Query Frame = 0
Query:    3 LGQRGCTVYVTGRSVGGNTTDKARQREIGGSLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYSFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTEKMKSLMTKSPAEFE 206
            LG+ G TVYVTGR     T D + Q  + G++  TA E+   GGKGIPV CDH++D+++KAL ERV SEQGR+DIL+NN F L   +  + KFW      WD L+ VG R HY+AS   AP+M++       K GLI  +SSF G  Y F+V YGVGKA VDR+AKDMAVEL    V  VS++PG+V+TE     +T+S AE E
Sbjct:   28 LGEAGATVYVTGR-----TLDDS-QSYVPGTIGATADEVTRLGGKGIPVRCDHSRDEEIKALIERVHSEQGRIDILINNVFTLPSENVFEGKFWEHSIQLWDDLLQVGCRGHYVASHAVAPIMVEQ------KGGLIVNISSFAGAAYVFSVPYGVGKAAVDRMAKDMAVELGPFGVTCVSLWPGVVRTE----YLTRSHAEGE 215          
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: A0A7M7RF35_STRPU (Uncharacterized protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7RF35_STRPU)

HSP 1 Score: 186 bits (471), Expect = 1.180e-54
Identity = 103/195 (52.82%), Postives = 131/195 (67.18%), Query Frame = 0
Query:    3 LGQRGCTVYVTGRSVGGNTTDKARQREIGGSLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQ-GRLDILVNNAFALGPG--DQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYSFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTEKM 194
            LG+ G TVY+TGR++      K +Q  +GGSLEETA EI+  GGK +PV CDH+KD Q+KALFER+E EQ G LD+LVNNA+A        +   FW      WD +  VGLR+HY+ S +AA LM+ +      K GLI  +SS GGL Y FNVAYGVGKA VDRLA D A EL++  VA +S++PG VKTE++
Sbjct:   27 LGEAGATVYITGRTL------KPKQDGVGGSLEETAREIDDRGGKCVPVQCDHSKDDQIKALFERIEKEQNGHLDVLVNNAYAAVSALMGAVNTPFWELPETIWDDINNVGLRNHYICSVYAAKLMVPA------KQGLIVNISSGGGLRYLFNVAYGVGKAAVDRLATDCAHELKKHGVAAISLWPGAVKTEQI 209          
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: B3RV93_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RV93_TRIAD)

HSP 1 Score: 184 bits (467), Expect = 3.310e-54
Identity = 102/195 (52.31%), Postives = 132/195 (67.69%), Query Frame = 0
Query:    1 VTLGQRGCTVYVTGRSVGGNTTDKARQREIGGSLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQ-GRLDILVNNAFALGPG--DQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYSFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTE 192
            V LG+ G TVY+TGR++         +  + GSL+ETA EI+AAGGKGIP+ CDH+KD+ +  LF  +  EQ GRLDILVNNA+A      D  Q KFW Q  + WD++  VGLR+HY+A+C A+ LM+        K GLI  +SS GGL Y FNVAYG+GKAGVDR+A D   EL++  VA+VS++PG VKTE
Sbjct:   24 VILGEEGATVYITGRTL-------EAKPGLSGSLKETAQEIDAAGGKGIPIQCDHSKDEDIAKLFATIAKEQDGRLDILVNNAYAGVQAIFDNSQKKFWEQPDNMWDTINGVGLRAHYIATCHASRLMVPR------KQGLIVNISSAGGLRYLFNVAYGIGKAGVDRMAADCGYELKKSNVAMVSLWPGPVKTE 205          
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: UPI001BB10D03 (dehydrogenase/reductase SDR family member 1-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB10D03)

HSP 1 Score: 184 bits (468), Expect = 3.340e-54
Identity = 103/193 (53.37%), Postives = 131/193 (67.88%), Query Frame = 0
Query:    3 LGQRGCTVYVTGRSVGGNTTDKARQREIGGSLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQ-GRLDILVNNAFALGPG--DQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYSFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTE 192
            LG+ G TVY+TGR++      K +Q  +GGSLEETA EI+  GGK +PV CDH+KD+QVKA+F+R+E EQ GRLD+LVNNA+A        +   FW      WD +  VGLR+HY+ + +AA LM+ +      K GLI  +SS GGL Y FNVAYGVGKA VDRLA D A EL++  VA VS++PG VKTE
Sbjct:   27 LGEAGATVYITGRTL------KPKQDGVGGSLEETAREIDDRGGKCVPVQCDHSKDEQVKAVFDRIEREQNGRLDVLVNNAYAAVTALMGAVSTPFWELPETIWDDVNNVGLRNHYICTVYAAKLMVPA------KQGLIVNISSGGGLRYLFNVAYGVGKAAVDRLAADCAHELKKHGVAAVSLWPGAVKTE 207          
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Match: A0A428ZNU2_KIBAR (Short-chain dehydrogenase n=1 Tax=Kibdelosporangium aridum TaxID=2030 RepID=A0A428ZNU2_KIBAR)

HSP 1 Score: 182 bits (462), Expect = 9.580e-54
Identity = 100/191 (52.36%), Postives = 128/191 (67.02%), Query Frame = 0
Query:    3 LGQRGCTVYVTGRSVGGNTTDKARQREIGGSLEETAAEIEAAGGKGIPVACDHAKDKQVKALFERVESEQGRLDILVNNAFALGP-GDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYSFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTE 192
            LG  G  VY+TGR+V            + G++ ETAAE+ A GG+GI +ACDH  D QVKA+F R+E+E GRLDILVNN F+       L   FWT   +AWD +I +GLRSHY+AS FA PL++K+  DR   P +I  +SS G  TYS NV YGVGKAGVD+L  DMA EL   ++AVVS++PG+V+TE
Sbjct:   27 LGAAGAVVYLTGRTVTAGP--------LPGTIAETAAEVTALGGQGIAIACDHRDDDQVKAVFARLEAEHGRLDILVNNVFSAADIAPWLNRPFWTLPVEAWDQVIDIGLRSHYVASVFAVPLLMKA--DR---PAVIVNISSPGATTYSHNVVYGVGKAGVDKLTADMAHELRAHEIAVVSVWPGLVRTE 204          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7422.18602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFH4_ECTSI1.240e-13395.67Short-chain dehydrogenase/reductase n=2 Tax=Ectoca... [more]
D8LFI0_ECTSI4.300e-9694.74Oxidoreductase, short chain dehydrogenase/reductas... [more]
A0A7S3USF7_HETAK2.730e-6252.40Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J9X4G2_PHATR2.300e-5750.23Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A6U5IRZ3_9STRA1.500e-5548.20Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A2D6BHG0_9DELT1.540e-5550.49Short-chain dehydrogenase n=1 Tax=Deltaproteobacte... [more]
A0A7M7RF35_STRPU1.180e-5452.82Uncharacterized protein n=2 Tax=Strongylocentrotus... [more]
B3RV93_TRIAD3.310e-5452.31Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]
UPI001BB10D033.340e-5453.37dehydrogenase/reductase SDR family member 1-like n... [more]
A0A428ZNU2_KIBAR9.580e-5452.36Short-chain dehydrogenase n=1 Tax=Kibdelosporangiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 156..175
score: 33.96
coord: 177..194
score: 25.44
coord: 73..84
score: 56.6
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 73..84
score: 50.77
coord: 137..145
score: 39.67
coord: 156..175
score: 29.6
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 33..198
e-value: 1.5E-26
score: 93.0
NoneNo IPR availableGENE3D3.40.50.720coord: 1..207
e-value: 5.7E-44
score: 152.1
NoneNo IPR availablePANTHERPTHR44147FAMILY NOT NAMEDcoord: 2..203
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 143..171
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 3..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7422contigEcto-sp13_S_contig7422:735..7513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7422.18602.1mRNA_Ecto-sp13_S_contig7422.18602.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7422 735..7513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7422.18602.1 ID=prot_Ecto-sp13_S_contig7422.18602.1|Name=mRNA_Ecto-sp13_S_contig7422.18602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
VTLGQRGCTVYVTGRSVGGNTTDKARQREIGGSLEETAAEIEAAGGKGIP
VACDHAKDKQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGA
DAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTY
SFNVAYGVGKAGVDRLAKDMAVELEEEKVAVVSMYPGIVKTEKMKSLMTK
SPAEFEAN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR036291NAD(P)-bd_dom_sf