prot_Ecto-sp13_S_contig74.18580.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig74.18580.1
Unique Nameprot_Ecto-sp13_S_contig74.18580.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length401
Homology
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BLAST of mRNA_Ecto-sp13_S_contig74.18580.1 vs. uniprot
Match: A0A6H5KAK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK1_9PHAE)

HSP 1 Score: 616 bits (1589), Expect = 2.600e-219
Identity = 343/400 (85.75%), Postives = 355/400 (88.75%), Query Frame = 0 
Query:    1 MGCGCSTHKRRVAAAKKEEDQGTSVQAVGTLTPTTPKASPDTNRPTPAPSPPKQQREFLKGMSPSSSSGGDISLGPSPVTPESANVLVATGTPPPSVSHEKGSDIAPKSDGAVTLMGMASSKGDHQSGEAETGAIKDETEKKEGRTSRKRSIKLVSQPGEPQVRLPRLSNQDSLPQIVPATRGSADLLGILSRGNTLGPGLDTAFREDPTDIVIPTETATAVAGRDSGATSSSDKCGEDGPTEVIETPATHTSDNTINEELVMTPITPEDTLDEDVLDEQRPVKDRWPRKNRARESPEPTRSRGHHNNXXXGPPPRLEARPALAAGVSVEVNTATDSSNHGGRGSLSVVDFPDDDPYNDLSAGGGLHSSDAGETWGEKSGALSLLDADEEDFMETLLMES 400
            MGCGCSTHKRRVAAAKKE DQGTSVQ VGT TPTTPKASP  N+PTPAPSPPKQQREFLKGMSPSSS GGD  LGPSPVTPESANVL ATGTPPP+VSHEKGSD AP+SD AVTL+G+ASS  DH+ GEAETGAIKDETEK+EGR SRKRSIKLVSQPGEPQVRLPRLSNQDSLPQIVP TRGSADLLGILSRGNTLGPGLDTAFREDPT IV+PTE ATAVA  DSGA SSSDK  ED PT VIE PATH +DNTINEE VMTP+TPEDTLD+ VL+EQRPVKDRWP  NRARESPE TR RGH   XX GPPPRLEARPALAAG   EVNTATDSSNHGGR SLSVVDFP DDP NDLSAGGGLHSSDAGETWG  SGALSLLDADEEDFMETLLMES
Sbjct:   42 MGCGCSTHKRRVAAAKKE-DQGTSVQTVGTFTPTTPKASPHANKPTPAPSPPKQQREFLKGMSPSSSFGGDT-LGPSPVTPESANVLAATGTPPPTVSHEKGSDTAPESDVAVTLVGVASSNSDHRLGEAETGAIKDETEKEEGRMSRKRSIKLVSQPGEPQVRLPRLSNQDSLPQIVPTTRGSADLLGILSRGNTLGPGLDTAFREDPTYIVVPTEAATAVAAHDSGAISSSDKRSEDRPTGVIEIPATHRNDNTINEEFVMTPVTPEDTLDKGVLEEQRPVKDRWPWNNRARESPETTR-RGHXXXXXDGPPPRLEARPALAAGAPGEVNTATDSSNHGGRRSLSVVDFPGDDPCNDLSAGGGLHSSDAGETWGATSGALSLLDADEEDFMETLLMES 438
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig74.18580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KAK1_9PHAE2.600e-21985.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig74contigEcto-sp13_S_contig74:30350..34051 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig74.18580.1mRNA_Ecto-sp13_S_contig74.18580.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig74 29902..34051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig74.18580.1 ID=prot_Ecto-sp13_S_contig74.18580.1|Name=mRNA_Ecto-sp13_S_contig74.18580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=401bp
MGCGCSTHKRRVAAAKKEEDQGTSVQAVGTLTPTTPKASPDTNRPTPAPS
PPKQQREFLKGMSPSSSSGGDISLGPSPVTPESANVLVATGTPPPSVSHE
KGSDIAPKSDGAVTLMGMASSKGDHQSGEAETGAIKDETEKKEGRTSRKR
SIKLVSQPGEPQVRLPRLSNQDSLPQIVPATRGSADLLGILSRGNTLGPG
LDTAFREDPTDIVIPTETATAVAGRDSGATSSSDKCGEDGPTEVIETPAT
HTSDNTINEELVMTPITPEDTLDEDVLDEQRPVKDRWPRKNRARESPEPT
RSRGHHNNDNDGPPPRLEARPALAAGVSVEVNTATDSSNHGGRGSLSVVD
FPDDDPYNDLSAGGGLHSSDAGETWGEKSGALSLLDADEEDFMETLLMES
*
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