prot_Ecto-sp13_S_contig74.18578.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig74.18578.1
Unique Nameprot_Ecto-sp13_S_contig74.18578.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length179
Homology
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BLAST of mRNA_Ecto-sp13_S_contig74.18578.1 vs. uniprot
Match: D7FMH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH3_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 8.820e-49
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 0 
Query:   37 GAFEDYDEEEVAALEAYMKTHPSKEEDKEALRKRAKELSASIGSGQGSEAKGGRTAGGNXXXXXXXXXXXXXXXXXXXXEPIEYTDASGKLKFNKRPVSAAAVGXXXXXXXXXXXXXXXXXXXXXXXXSNAKLLSFGDDEDG 178
            GAFEDYDEEEVAALEAYMKTHPSKEEDKEALRKRA+ELSASIGSGQGSEAKGGRTAGGNXXXXXXXXXXXXXXXXXXX EPIEYTDASGKLKFNKRPVSAAA GXXXXXXXXXXXXXXXXXXXXXXXXSNAKLLSFGDDEDG
Sbjct:   37 GAFEDYDEEEVAALEAYMKTHPSKEEDKEALRKRARELSASIGSGQGSEAKGGRTAGGNXXXXXXXXXXXXXXXXXXXEEPIEYTDASGKLKFNKRPVSAAAGGXXXXXXXXXXXXXXXXXXXXXXXXSNAKLLSFGDDEDG 178
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BLAST of mRNA_Ecto-sp13_S_contig74.18578.1 vs. uniprot
Match: A0A6H5KEF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF2_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 5.020e-17
Identity = 44/46 (95.65%), Postives = 45/46 (97.83%), Query Frame = 0 
Query:   37 GAFEDYDEEEVAALEAYMKTHPSKEEDKEALRKRAKELSASIGSGQ 82
            GAFEDYDEEEVAALEAYMKTHPSKEEDKEALRKRA+ELS SIGSGQ
Sbjct:  101 GAFEDYDEEEVAALEAYMKTHPSKEEDKEALRKRARELSVSIGSGQ 146
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig74.18578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMH3_ECTSI8.820e-4997.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEF2_9PHAE5.020e-1795.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig74contigEcto-sp13_S_contig74:21477..23054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig74.18578.1mRNA_Ecto-sp13_S_contig74.18578.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig74 21477..23780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig74.18578.1 ID=prot_Ecto-sp13_S_contig74.18578.1|Name=mRNA_Ecto-sp13_S_contig74.18578.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp
MPGRGRGRDRDSNQAAAEGSGGSGGGGAAGGGGGSGGAFEDYDEEEVAAL
EAYMKTHPSKEEDKEALRKRAKELSASIGSGQGSEAKGGRTAGGNGGAAG
VGSAAGAPKAPSPPEEPIEYTDASGKLKFNKRPVSAAAVGAAGKSGESGK
GSKKKTKRAKLAKLSNAKLLSFGDDEDG*
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