prot_Ecto-sp13_S_contig73922.18569.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig73922.18569.1
Unique Nameprot_Ecto-sp13_S_contig73922.18569.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length124
Homology
BLAST of mRNA_Ecto-sp13_S_contig73922.18569.1 vs. uniprot
Match: UPI001420C2DF (cadherin-like domain-containing protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001420C2DF)

HSP 1 Score: 120 bits (300), Expect = 5.090e-29
Identity = 89/123 (72.36%), Postives = 105/123 (85.37%), Query Frame = 0
Query:    1 GAGDSVVFLGGSDDDSXXXXXXXXXXXXXXXXXXXXXXXXXXLFVLRAEDGTDVLELADVIADFEIGVDSLGLADGLSADNLAITATQGGDAAITMFSSGAYLAVLQGVSATDISPDEIAFLV 123
            GAGD+ +FLGG+  D  XXXXXXXXXXXXXXXXXXXXXXX  LF+LRAEDG DVLELADVIADFEIG+DSLGL DGLS  +LA+TATQGGDAAI + SSGA+LAVLQG+S ++++ D  + +V
Sbjct: 3180 GAGDAAIFLGGTGGDDFXXXXXXXXXXXXXXXXXXXXXXXSDLFILRAEDGADVLELADVIADFEIGIDSLGLVDGLSVGDLAVTATQGGDAAIALQSSGAFLAVLQGISVSEVNLDVFSAVV 3302          
BLAST of mRNA_Ecto-sp13_S_contig73922.18569.1 vs. uniprot
Match: UPI00142344FA (Ig-like domain-containing protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00142344FA)

HSP 1 Score: 94.0 bits (232), Expect = 7.340e-20
Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 0
Query:   43 LFVLRAEDGTDVLELADVIADFEIGVDSLGLADGLSADNLAITATQGGDAAITMFSSGAYLAVLQGVSATDISPDEI 119
            LFVLRA D  + LEL DVI DFE+G+DSL L DGL+ D+L ++ T  GDA I + S+GA+LAV+QGVSA DISPD I
Sbjct: 1536 LFVLRAADAAETLELTDVIGDFEVGIDSLVLVDGLTGDDLTVSETPEGDAVIALQSTGAFLAVVQGVSAADISPDNI 1612          
BLAST of mRNA_Ecto-sp13_S_contig73922.18569.1 vs. uniprot
Match: A0A545U1I8_9PROT (FecR domain-containing protein n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545U1I8_9PROT)

HSP 1 Score: 61.6 bits (148), Expect = 1.580e-8
Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 0
Query:    2 AGDSVVFLGGSDDDSXXXXXXXXXXXXXXXXXXXXXXXXXXLFVLRAEDGTDVLELADVIADFEIGVDSLGLADGLSADNLAITATQGGDAAITMFSSGAYLAVLQGVSATDISPDEIAFLV 123
            AGDS +F+GGS +D  XXXXXXXXXXXXXXXXXXXXXXXXX+F     DG + L LAD++ DFE G+D +GL DGL   +L I+A     A +++  +G  L VL G+S+  +   +   LV
Sbjct: 2832 AGDSTIFMGGSLNDDFXXXXXXXXXXXXXXXXXXXXXXXXXIFAYARGDGGNSLNLADLLTDFEDGIDKIGLEDGLLFSDLTISADASDRAVVSVVDTGELLVVLDGLSSDLVDEQDFVLLV 2953          
BLAST of mRNA_Ecto-sp13_S_contig73922.18569.1 vs. uniprot
Match: UPI001880284D (hypothetical protein n=2 Tax=Tychonema TaxID=54312 RepID=UPI001880284D)

HSP 1 Score: 56.6 bits (135), Expect = 5.460e-7
Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   43 LFVLRAEDGTDVLELADVIADFEIGVDSLGLADGLSADNLAITATQGGDAAITMF---SSGAYLAVLQGVSATDISPDEIAF 121
            LF L     T++L+LAD+I DF+ G D L L D L   N+ IT   G  AA T+    S+G YLAVL+GV+A +I+  +  F
Sbjct:  180 LFELEGRSATNILDLADIITDFQKGADILELEDDLRFSNINITQGTGIYAADTLLQIASTGQYLAVLKGVNAGNINQADFIF 261          
BLAST of mRNA_Ecto-sp13_S_contig73922.18569.1 vs. uniprot
Match: A0A7X6HRJ0_9CYAN (Calcium-binding protein n=1 Tax=Microcoleus sp. SU_5_6 TaxID=2720483 RepID=A0A7X6HRJ0_9CYAN)

HSP 1 Score: 55.5 bits (132), Expect = 1.580e-6
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   43 LFVLRAEDGTDVLELADVIADFEIGVDSLGLADGLSADNLAITATQGGDAAITMF---SSGAYLAVLQGVSATDISPDEIAF 121
            LF L     T++L++AD+I DF+ G D L L DGL   N+ IT   G  A+ T+    S+G YLAVL+GV++  I+  +  F
Sbjct:  203 LFELEGRSATNILDIADIITDFQKGADILKLKDGLGFSNINITQGTGIYASNTLLQVASTGQYLAVLKGVNSGIINAADFTF 284          
BLAST of mRNA_Ecto-sp13_S_contig73922.18569.1 vs. uniprot
Match: UPI0019EB7190 (Uncharacterized protein n=1 Tax=Oscillatoriales cyanobacterium LEGE 11467 TaxID=1828826 RepID=UPI0019EB7190)

HSP 1 Score: 54.7 bits (130), Expect = 3.810e-6
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   43 LFVLRAEDGTDVLELADVIADFEIGVDSLGLADGLSADNLAITATQGGDAAITMFSSGAYLAVLQGVSATDIS 115
            +FVLR  DG+DV      I DFE+GVD LGLADGLS + L IT  QG    +  F +   L  L+GVSAT ++
Sbjct:   19 VFVLRVGDGSDV------ITDFEVGVDLLGLADGLSFEQLTIT--QGTTGTVVSFGAEV-LVTLEGVSATSLN 82          
BLAST of mRNA_Ecto-sp13_S_contig73922.18569.1 vs. uniprot
Match: A0A3M0XZ10_9PROT (VWA domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XZ10_9PROT)

HSP 1 Score: 52.0 bits (123), Expect = 3.500e-5
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   43 LFVLRAEDGTDVLELADVIADFEIGVDSLGLADGLSADNLAITATQGGDAAITMFSSGAYLAVLQGVSATDISPDEI 119
            ++V    DG   +  ADVI DF+ GVD +GL  GL++ ++ I     G+A I+  +SG  LAVL GVS  DI+ D++
Sbjct:  973 IYVYEPGDGGSTIAEADVIHDFDDGVDLIGLGGGLTSADITIGDDGSGNAVIST-TSGEVLAVLIGVSPADITDDDL 1048          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73922.18569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
UPI001420C2DF5.090e-2972.36cadherin-like domain-containing protein n=1 Tax=Pe... [more]
UPI00142344FA7.340e-2062.34Ig-like domain-containing protein n=1 Tax=Pelagibi... [more]
A0A545U1I8_9PROT1.580e-851.64FecR domain-containing protein n=1 Tax=Denitrobacu... [more]
UPI001880284D5.460e-743.90hypothetical protein n=2 Tax=Tychonema TaxID=54312... [more]
A0A7X6HRJ0_9CYAN1.580e-641.46Calcium-binding protein n=1 Tax=Microcoleus sp. SU... [more]
UPI0019EB71903.810e-649.32Uncharacterized protein n=1 Tax=Oscillatoriales cy... [more]
A0A3M0XZ10_9PROT3.500e-541.56VWA domain-containing protein (Fragment) n=1 Tax=A... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00313CABNDNGRPTcoord: 37..46
score: 53.41
coord: 28..36
score: 62.33
coord: 19..27
score: 60.16
coord: 7..18
score: 27.44
IPR001343RTX calcium-binding nonapeptide repeatPFAMPF00353HemolysinCabindcoord: 10..43
e-value: 8.5E-7
score: 28.9
IPR011049Serralysin-like metalloprotease, C-terminalGENE3D2.150.10.10coord: 1..122
e-value: 3.4E-16
score: 61.8
IPR011049Serralysin-like metalloprotease, C-terminalSUPERFAMILY51120beta-Rollcoord: 7..121
IPR018511Hemolysin-type calcium-binding conserved sitePROSITEPS00330HEMOLYSIN_CALCIUMcoord: 24..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig73922contigEcto-sp13_S_contig73922:8..379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig73922.18569.1mRNA_Ecto-sp13_S_contig73922.18569.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig73922 8..379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig73922.18569.1 ID=prot_Ecto-sp13_S_contig73922.18569.1|Name=mRNA_Ecto-sp13_S_contig73922.18569.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp
GAGDSVVFLGGSDDDSFTGGNGADRLDGGAGRDSLVGGGGSDLFVLRAED
GTDVLELADVIADFEIGVDSLGLADGLSADNLAITATQGGDAAITMFSSG
AYLAVLQGVSATDISPDEIAFLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001343Hemolysn_Ca-bd
IPR011049Serralysin-like_metalloprot_C
IPR018511Hemolysin-typ_Ca-bd_CS