mRNA_Ecto-sp13_S_contig73807.18558.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A6H5KXR6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR6_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.320e-32 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 180
GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ
Sbjct: 952 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 1011
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: D7FNE8_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE8_ECTSI) HSP 1 Score: 127 bits (318), Expect = 1.320e-32 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 180
GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ
Sbjct: 1065 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 1124
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A835YX58_9STRA (Calcium-independent phospholipase-like protein A2-gamma, C terminal part n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX58_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 8.430e-20 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 180
GR+P +VFD++VGTSTG I+A LAG++ FP+A+CE MYD+LI IF K P GG+KLALKQ
Sbjct: 44 GREPAQVFDIVVGTSTGAIVAALAGLECFPLAQCEAMYDALIKDIFQKSPSGGVKLALKQ 103
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A0G4F2X6_VITBC (PNPLA domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F2X6_VITBC) HSP 1 Score: 70.5 bits (171), Expect = 1.010e-12 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPG--GGMKLALKQ 180
GR+ HEVFD+I GTSTGGIIA L GV+ V E E +YD+LI IF+K PG G +L +KQ
Sbjct: 1449 GREVHEVFDIICGTSTGGIIAMLLGVQKSSVNEVEVLYDNLIKDIFVKDPGPISGARLVVKQ 1510
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A7R9UET1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET1_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.040e-12 Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKL 168
G++ HE+FD+I GTSTGGIIA L GV+ + + ER+YD L+ KIF + PG G KL
Sbjct: 165 GKELHELFDVICGTSTGGIIAVLLGVRRMSIDDIERLYDILLGKIFQRLPGAGAKL 220
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A7S2R4X2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4X2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 8.850e-12 Identity = 29/61 (47.54%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHP-GGGMKLALKQ 180
G+ HE+FD++ GTSTG IIA L G+K P+ EC ++YD L+++IF+K+ G +KL ++Q
Sbjct: 251 GKDIHEIFDVVAGTSTGAIIACLIGLKHTPIDECAKLYDQLVSEIFVKNVISGPIKLGIRQ 311
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: F0VI15_NEOCL (PNPLA domain-containing protein n=2 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VI15_NEOCL) HSP 1 Score: 65.5 bits (158), Expect = 5.850e-11 Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGG--GMKLALKQ 180
GR+ HE FD+I GTSTGG+IA L G++ V E ER+YD LI +IF++ G +L L+Q
Sbjct: 1545 GREVHETFDIICGTSTGGVIAALLGLEKATVTETERLYDLLIREIFVRDSAAVTGARLVLRQ 1606
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A2A9MKX0_9APIC (PNPLA domain-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MKX0_9APIC) HSP 1 Score: 65.1 bits (157), Expect = 8.000e-11 Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGG--GMKLALKQ 180
G++ HE FD+I GTSTGG+IA L G++ V E ER+YD LI +IF++ G +L L+Q
Sbjct: 2028 GKEAHETFDIICGTSTGGVIAALLGLEKASVVEAERLYDLLIREIFVRDSAAVTGARLVLRQ 2089
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: S8GAX0_TOXGM (Phospholipase, patatin family protein n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=S8GAX0_TOXGM) HSP 1 Score: 64.7 bits (156), Expect = 1.090e-10 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGG--GMKLALKQ 180
G++ HE FD+I GTSTGG+IA L G++ V+E ER+YD LI +IF++ G +L L+Q
Sbjct: 2057 GQEVHETFDIICGTSTGGVIAALLGLEKATVSEAERLYDLLIREIFVRDSAAVTGARLVLRQ 2118
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A4D9CW07_9STRA (PNPLA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW07_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.470e-10 Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 1 GRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHP 150
G++ HE+FD+I GTSTGGI+A L VKA V E R+YD LI KIF K P
Sbjct: 233 GKEVHELFDIICGTSTGGILAALFAVKATKVKEAGRLYDELIKKIFNKSP 282 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig73807.18558.1 >prot_Ecto-sp13_S_contig73807.18558.1 ID=prot_Ecto-sp13_S_contig73807.18558.1|Name=mRNA_Ecto-sp13_S_contig73807.18558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKback to top mRNA from alignment at Ecto-sp13_S_contig73807:138..317- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig73807.18558.1 ID=mRNA_Ecto-sp13_S_contig73807.18558.1|Name=mRNA_Ecto-sp13_S_contig73807.18558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=180bp|location=Sequence derived from alignment at Ecto-sp13_S_contig73807:138..317- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig73807:138..317- >mRNA_Ecto-sp13_S_contig73807.18558.1 ID=mRNA_Ecto-sp13_S_contig73807.18558.1|Name=mRNA_Ecto-sp13_S_contig73807.18558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=153bp|location=Sequence derived from alignment at Ecto-sp13_S_contig73807:138..317- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |