prot_Ecto-sp13_S_contig73801.18556.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig73801.18556.1
Unique Nameprot_Ecto-sp13_S_contig73801.18556.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length110
Homology
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 9.810e-12
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 AIDEKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQA 43
            AI EKV GPDHP +AT LNN A LL++QGKY EAEPLYERSQA
Sbjct:   84 AIKEKVLGPDHPSLATTLNNRAGLLEAQGKYVEAEPLYERSQA 126          
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: UPI000C46EE86 (tetratricopeptide repeat protein n=1 Tax=Limnothrix sp. PR1529 TaxID=1704291 RepID=UPI000C46EE86)

HSP 1 Score: 60.8 bits (146), Expect = 1.050e-8
Identity = 28/41 (68.29%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    5 KVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAIR 45
            K Y PDHPE+AT LNN A L +SQG+YE AEPLY RS A R
Sbjct:    5 KCYEPDHPEIATSLNNLAELYESQGRYEAAEPLYRRSLATR 45          
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 2.340e-8
Identity = 32/60 (53.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:    1 AIDEKVYGPDHPEVATDLNNWAALLDSQ---------------GKYEEAEPLYERSQAIR 45
            +I +K +GPDHPE+AT LNNWA LL SQ               GKY+ AEPLY RS AIR
Sbjct:  353 SILKKTHGPDHPEIATGLNNWAGLLSSQHHEANFSLAFRVPCQGKYDAAEPLYVRSLAIR 412          
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.090e-8
Identity = 33/67 (49.25%), Postives = 37/67 (55.22%), Query Frame = 0
Query:    1 AIDEKVYGPDHPEVATDLNNWAALLDS-----------------------QGKYEEAEPLYERSQAI 44
            AIDEKVYGPDHP+VAT LNNW  LL                         QGKY++A PLY+RS AI
Sbjct:  366 AIDEKVYGPDHPDVATALNNWVRLLSICSSALKYLLALTTLLPVVPFLIFQGKYDQAGPLYDRSLAI 432          
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 5.130e-8
Identity = 35/72 (48.61%), Postives = 37/72 (51.39%), Query Frame = 0
Query:    1 AIDEKVYGPDHPEVATDLNNWAALL----------------------------DSQGKYEEAEPLYERSQAI 44
            AIDEKVYGPDHPEVATDLNNWAAL                             D+Q K+EEA  LY RS  I
Sbjct:  130 AIDEKVYGPDHPEVATDLNNWAALYEVQAIREKTIGAEHLDLVDVIIRRARVCDNQAKHEEARRLYGRSLEI 201          
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A355B128_9BACT (Pilus assembly protein PilF (Fragment) n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A355B128_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 5.710e-8
Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    4 EKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAI 44
            EK  GP+HP+VAT LNN A++L +QG ++EAEPLY+R+ +I
Sbjct:    1 EKALGPEHPDVATGLNNLASVLQAQGLFKEAEPLYKRTLSI 41          
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A7S3NNH9_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNH9_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.810e-8
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    2 IDEKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERS 41
            I EK  GP+HP++AT LNN A LL++QGKY+EA+ LYER+
Sbjct:    2 IGEKTLGPNHPDLATRLNNLAGLLENQGKYDEAKLLYERA 41          
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A7S3K3F8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3F8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.810e-8
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    2 IDEKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERS 41
            I EK  GP+HP++AT LNN A LL++QGKY+EA+ LYER+
Sbjct:    2 IGEKTLGPNHPDLATRLNNLAGLLENQGKYDEAKLLYERA 41          
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: UPI00037296AD (tetratricopeptide repeat protein n=1 Tax=Desulfobacter curvatus TaxID=2290 RepID=UPI00037296AD)

HSP 1 Score: 58.9 bits (141), Expect = 7.870e-8
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    4 EKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAI 44
            EK  GPDHP+VAT L+N + L  SQGKYEEAEPLY+RS  I
Sbjct:  508 EKANGPDHPDVATILDNLSELYKSQGKYEEAEPLYQRSLKI 548          
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: UPI001BE10FAB (tetratricopeptide repeat protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI001BE10FAB)

HSP 1 Score: 54.3 bits (129), Expect = 1.290e-7
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    8 GPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAI 44
            GPDHP+VAT LNN A L  SQG+Y +AEPL++RS AI
Sbjct:    3 GPDHPDVATSLNNLAELYRSQGQYAQAEPLFKRSLAI 39          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0C4_9PHAE9.810e-1276.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000C46EE861.050e-868.29tetratricopeptide repeat protein n=1 Tax=Limnothri... [more]
A0A6H5J9V8_9PHAE2.340e-853.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIY6_9PHAE3.090e-849.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LI51_9PHAE5.130e-848.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A355B128_9BACT5.710e-858.54Pilus assembly protein PilF (Fragment) n=1 Tax=Nit... [more]
A0A7S3NNH9_9STRA6.810e-862.50Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S3K3F8_9STRA6.810e-862.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
UPI00037296AD7.870e-868.29tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
UPI001BE10FAB1.290e-767.57tetratricopeptide repeat protein n=1 Tax=Klebsiell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 48..69
score: 37.27
coord: 13..33
score: 58.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..110
e-value: 4.0E-38
score: 133.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 9..109
NoneNo IPR availablePFAMPF13374TPR_10coord: 73..98
e-value: 9.9E-6
score: 25.3
NoneNo IPR availablePFAMPF13424TPR_12coord: 18..64
e-value: 2.1E-11
score: 44.0
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 43..107
coord: 2..51
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 43..107
coord: 2..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig73801contigEcto-sp13_S_contig73801:1..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig73801.18556.1mRNA_Ecto-sp13_S_contig73801.18556.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig73801 1..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig73801.18556.1 ID=prot_Ecto-sp13_S_contig73801.18556.1|Name=mRNA_Ecto-sp13_S_contig73801.18556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp
AIDEKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAIREKVLG
PEHPAVATVLNNRAGFLSNCPSAYDEADSLYQRALGIDEKVLGPDHPDVA
KDLNSRAGLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR011990TPR-like_helical_dom_sf