mRNA_Ecto-sp13_S_contig73801.18556.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 9.810e-12 Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 1 AIDEKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQA 129
AI EKV GPDHP +AT LNN A LL++QGKY EAEPLYERSQA
Sbjct: 84 AIKEKVLGPDHPSLATTLNNRAGLLEAQGKYVEAEPLYERSQA 126
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: UPI000C46EE86 (tetratricopeptide repeat protein n=1 Tax=Limnothrix sp. PR1529 TaxID=1704291 RepID=UPI000C46EE86) HSP 1 Score: 60.8 bits (146), Expect = 1.050e-8 Identity = 28/41 (68.29%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 13 KVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAIR 135
K Y PDHPE+AT LNN A L +SQG+YE AEPLY RS A R
Sbjct: 5 KCYEPDHPEIATSLNNLAELYESQGRYEAAEPLYRRSLATR 45
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 2.340e-8 Identity = 32/60 (53.33%), Postives = 37/60 (61.67%), Query Frame = 1
Query: 1 AIDEKVYGPDHPEVATDLNNWAALLDSQ---------------GKYEEAEPLYERSQAIR 135
+I +K +GPDHPE+AT LNNWA LL SQ GKY+ AEPLY RS AIR
Sbjct: 353 SILKKTHGPDHPEIATGLNNWAGLLSSQHHEANFSLAFRVPCQGKYDAAEPLYVRSLAIR 412
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.090e-8 Identity = 33/67 (49.25%), Postives = 37/67 (55.22%), Query Frame = 1
Query: 1 AIDEKVYGPDHPEVATDLNNWAALLDS-----------------------QGKYEEAEPLYERSQAI 132
AIDEKVYGPDHP+VAT LNNW LL QGKY++A PLY+RS AI
Sbjct: 366 AIDEKVYGPDHPDVATALNNWVRLLSICSSALKYLLALTTLLPVVPFLIFQGKYDQAGPLYDRSLAI 432
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE) HSP 1 Score: 59.3 bits (142), Expect = 5.130e-8 Identity = 35/72 (48.61%), Postives = 37/72 (51.39%), Query Frame = 1
Query: 1 AIDEKVYGPDHPEVATDLNNWAALL----------------------------DSQGKYEEAEPLYERSQAI 132
AIDEKVYGPDHPEVATDLNNWAAL D+Q K+EEA LY RS I
Sbjct: 130 AIDEKVYGPDHPEVATDLNNWAALYEVQAIREKTIGAEHLDLVDVIIRRARVCDNQAKHEEARRLYGRSLEI 201
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A355B128_9BACT (Pilus assembly protein PilF (Fragment) n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A355B128_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 5.710e-8 Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 1
Query: 10 EKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAI 132
EK GP+HP+VAT LNN A++L +QG ++EAEPLY+R+ +I
Sbjct: 1 EKALGPEHPDVATGLNNLASVLQAQGLFKEAEPLYKRTLSI 41
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A7S3NNH9_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNH9_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 6.810e-8 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 4 IDEKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERS 123
I EK GP+HP++AT LNN A LL++QGKY+EA+ LYER+
Sbjct: 2 IGEKTLGPNHPDLATRLNNLAGLLENQGKYDEAKLLYERA 41
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: A0A7S3K3F8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3F8_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 6.810e-8 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 4 IDEKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERS 123
I EK GP+HP++AT LNN A LL++QGKY+EA+ LYER+
Sbjct: 2 IGEKTLGPNHPDLATRLNNLAGLLENQGKYDEAKLLYERA 41
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: UPI00037296AD (tetratricopeptide repeat protein n=1 Tax=Desulfobacter curvatus TaxID=2290 RepID=UPI00037296AD) HSP 1 Score: 58.9 bits (141), Expect = 7.870e-8 Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 10 EKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAI 132
EK GPDHP+VAT L+N + L SQGKYEEAEPLY+RS I
Sbjct: 508 EKANGPDHPDVATILDNLSELYKSQGKYEEAEPLYQRSLKI 548
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Match: UPI001BE10FAB (tetratricopeptide repeat protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI001BE10FAB) HSP 1 Score: 54.3 bits (129), Expect = 1.290e-7 Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 22 GPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAI 132
GPDHP+VAT LNN A L SQG+Y +AEPL++RS AI
Sbjct: 3 GPDHPDVATSLNNLAELYRSQGQYAQAEPLFKRSLAI 39 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73801.18556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig73801.18556.1 >prot_Ecto-sp13_S_contig73801.18556.1 ID=prot_Ecto-sp13_S_contig73801.18556.1|Name=mRNA_Ecto-sp13_S_contig73801.18556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp AIDEKVYGPDHPEVATDLNNWAALLDSQGKYEEAEPLYERSQAIREKVLGback to top mRNA from alignment at Ecto-sp13_S_contig73801:1..502+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig73801.18556.1 ID=mRNA_Ecto-sp13_S_contig73801.18556.1|Name=mRNA_Ecto-sp13_S_contig73801.18556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=502bp|location=Sequence derived from alignment at Ecto-sp13_S_contig73801:1..502+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig73801:1..502+ >mRNA_Ecto-sp13_S_contig73801.18556.1 ID=mRNA_Ecto-sp13_S_contig73801.18556.1|Name=mRNA_Ecto-sp13_S_contig73801.18556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=330bp|location=Sequence derived from alignment at Ecto-sp13_S_contig73801:1..502+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |