mRNA_Ecto-sp13_S_contig73395.18504.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: A0A7C7KJA7_9PROT (Flotillin family protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7KJA7_9PROT) HSP 1 Score: 187 bits (476), Expect = 1.050e-52 Identity = 142/220 (64.55%), Postives = 151/220 (68.64%), Query Frame = 1
Query: 1 ARLDTERNVANYAAETRAQTAEKEAEAKRLEEQAAIXXXXXXXXXXXXXXXXXXLTRQDKAIIVATKSXXXXXXXXXXXXXXXXXXXXEEEVKTVARVAXXXXXKAVAIVAAKEDAEKNAVGITVAAEAERTAAEDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXEADGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVIDFG 660
ARL+TERNVANY AETRA+TA+KEAEAKRLE++AAI LTRQDKAI VATKS EE+VKTVARVA XXXX NAVG+TVAAEAER A+EDEA A XXXXXXXXXXXXX EA+GQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVIDFG
Sbjct: 244 ARLETERNVANYTAETRAETAQKEAEAKRLEDEAAIQATLAVERKQIESDRDVELTRQDKAITVATKSQEESLAAAEANKARASAVREEEQVKTVARVAEXXXXXXXXXXXXXXXXXXNAVGVTVAAEAERQASEDEAQATLITARASSEXXXXXXXXXXXXXKVEAEGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVIDFG 463
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: UPI0018724AA4 (SPFH domain-containing protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018724AA4) HSP 1 Score: 123 bits (309), Expect = 5.030e-29 Identity = 144/220 (65.45%), Postives = 148/220 (67.27%), Query Frame = 1
Query: 1 ARLDTERNVANYAAETRAQTAEKEAEAKRLEEQAAIXXXXXXXXXXXXXXXXXXLTRQDKAIIVATKSXXXXXXXXXXXXXXXXXXXXEEEVKTVARVAXXXXXKAVAIVAAKEDAEKNAVGITVAAEAERTAAEDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXEADGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVIDFG 660
ARL+TERNVANYAAETRAQTA+KEAEAKRLEE+AAI LTRQDKAI VATKS XXXXXXXXXXXXXXXX XXXXX XXXXXXXXXXXXXXXXXXXXXXXXX +GQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVIDFG
Sbjct: 244 ARLNTERNVANYAAETRAQTAQKEAEAKRLEEEAAIQTRLAVERKQIESDRDVELTRQDKAITVATKSQEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVIDFG 463
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: UPI00141F84E0 (SPFH domain-containing protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00141F84E0) HSP 1 Score: 99.8 bits (247), Expect = 1.330e-20 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query: 502 DGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVIDFG 660
DGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVIDFG
Sbjct: 411 DGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVIDFG 463
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: UPI001781CB82 (SPFH domain-containing protein n=1 Tax=Pelagicoccus enzymogenes TaxID=2773457 RepID=UPI001781CB82) HSP 1 Score: 85.9 bits (211), Expect = 8.360e-16 Identity = 57/160 (35.62%), Postives = 82/160 (51.25%), Query Frame = 1
Query: 172 QDKAIIVATKSXXXXXXXXXXXXXXXXXXXXEEEVKTVARVAXXXXXKAVAIVAAKEDAEKNAVGITVAAEAERTAAEDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXEADGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVI 651
Q+ AIIVA KS EE+V TV A K + ++ A+EDAEK A+ +TVAAEA++ AA D+A A EA G++AIN A+N+L +I EL+K L +V P++M AS+K +EKI I+++
Sbjct: 327 QEAAIIVAKKSEEKSQAEAEAAKARSNFVREEEQVVTVRETAIANRKKEIELIKAREDAEKQAIDVTVAAEADKQAALDKAEAVLTESKAAAEKIRIIAEADQKRFEVEAYGEKAINEAKNILSSELIGFELRKILAQVAPKIMEASVKPMEKIDSIKIL 486
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: A0A651HCK7_9BACT (Flotillin family protein n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A651HCK7_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 9.820e-15 Identity = 57/163 (34.97%), Postives = 85/163 (52.15%), Query Frame = 1
Query: 163 LTRQDKAIIVATKSXXXXXXXXXXXXXXXXXXXXEEEVKTVARVAXXXXXKAVAIVAAKEDAEKNAVGITVAAEAERTAAEDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXEADGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVI 651
+++Q I VA KS EE+V+TV A K V ++ A+EDA+++A+GITVAAEAER AA+D A A EA G+ AIN A+N+L II E++K + +V P++M A++K +EKI+ I++I
Sbjct: 337 ISKQVADIEVAKKSEEKSKAEASAAIAFAEKVKQEEQVETVRTTAVANRTKEVRLIKAQEDAQQDAIGITVAAEAERKAAQDRAEAALTEARANADRIRIIAEADQKRLEVEAIGERAINEAKNLLAGHIIDFEIRKIVAQVAPQIMEAAVKPMEKIESIKII 499
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: A0A7X7GNX0_9DELT (Flotillin family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7GNX0_9DELT) HSP 1 Score: 82.0 bits (201), Expect = 1.810e-14 Identity = 90/163 (55.21%), Postives = 114/163 (69.94%), Query Frame = 1
Query: 163 LTRQDKAIIVATKSXXXXXXXXXXXXXXXXXXXXEEEVKTVARVAXXXXXKAVAIVAAKEDAEKNAVGITVAAEAERTAAEDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXEADGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVI 651
+++Q AI VA KS XXXXXXXX EEEV TV A K + ++ A+E+AE+ A+ +TV A AER AA+D A AXXXXXXXXXXXXXXXXXXXXXXXXX A G++AIN A+N+L II EL+K + ++ PEV+AAS+K +EKI IR+I
Sbjct: 337 ISKQAAAIAVARKSEEKSXXXXXXXXARALMVKQEEEVVTVRETAVATRLKEIQLIKAREEAEQKAIDVTVRATAEREAAKDRADAXXXXXXXXXXXXXXXXXXXXXXXXXXAFGEKAINEAKNILSGEIIRFELRKLIAQLAPEVVAASVKPMEKIDSIRII 499
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: UPI0013592855 (flotillin family protein n=1 Tax=Alcanivorax sp. S71-1-4 TaxID=1177159 RepID=UPI0013592855) HSP 1 Score: 78.6 bits (192), Expect = 2.730e-13 Identity = 74/130 (56.92%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 265 EEEVKTVARVAXXXXXKAVAIVAAKEDAEKNAVGITVAAEAERTAAEDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXEADGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVID 654
EE+VKTV A KAV +V A+E AE+ A+GIT+AAEA++ A+ED A XXXXXXXXXXXXXXXXXXXXXXXX EA+GQ AIN ARN L + I LE++ LI +P ++ S+K +E+I I+++D
Sbjct: 346 EEQVKTVRETAVAERAKAVRLVQAREKAEQEAIGITLAAEADKKASEDRAXXXXXXXXXXXXXXXXXXXXXXXXXXVEAEGQRAINEARNALSEDQIRLEIRLELIRKLPSIIEQSVKPMERIDGIKIMD 475
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: UPI001985824B (Flotillin family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001985824B) HSP 1 Score: 77.0 bits (188), Expect = 9.260e-13 Identity = 71/163 (43.56%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 163 LTRQDKAIIVATKSXXXXXXXXXXXXXXXXXXXXEEEVKTVARVAXXXXXKAVAIVAAKEDAEKNAVGITVAAEAERTAAEDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXEADGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVI 651
+ Q+ I VA KS EE+VKTV VA K + ++ A+E AE++AV + VAA+A+R AAED A A XXXXXXXXXXXXXXXXX EA G AIN A+N+L + I+A E++K L+ + ++ A+MK EKI IR++
Sbjct: 314 IANQEARIAVAKKSEELSKADAEAAAARAIMVKAEEQVKTVQEVAAAERAKEIVVIKARETAEQDAVRVIVAADADRKAAEDRAAAVRTQAXXXXXXXXXXXXXXXXXLAVEAAGLHAINVAKNLLGEGIMAFEVRKELVAKLEGIITAAMKPAEKIDSIRML 476
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: UPI001CFA9F4A (flotillin family protein n=1 Tax=Quatrionicoccus australiensis TaxID=138118 RepID=UPI001CFA9F4A) HSP 1 Score: 76.6 bits (187), Expect = 1.250e-12 Identity = 64/163 (39.26%), Postives = 89/163 (54.60%), Query Frame = 1
Query: 163 LTRQDKAIIVATKSXXXXXXXXXXXXXXXXXXXXEEEVKTVARVAXXXXXKAVAIVAAKEDAEKNAVGITVAAEAERTAAEDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXEADGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVI 651
L QDK I +A KSXXXXXXXX EE+VKT VA K +A+V A+++A++ A+G+ V+AEAE+ AAE+ A A EA+G E NAA N LD IA+++K L E +P ++ AS+K +EKI I++I
Sbjct: 324 LADQDKLISIAEKSXXXXXXXXQANEARALAAKAEEQVKTAREVAIAEREKQIALVVAEQEAQQQAIGVRVSAEAEKDAAENHAQAVKIKAEALQVQYQV-----------EANGIELRNAALNTLDAEQIAMQIKMKLFEALPGIIEASVKPIEKIDGIKII 475
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Match: UPI00200E67BC (flotillin family protein n=1 Tax=Shewanella electrodiphila TaxID=934143 RepID=UPI00200E67BC) HSP 1 Score: 75.1 bits (183), Expect = 4.290e-12 Identity = 85/163 (52.15%), Postives = 115/163 (70.55%), Query Frame = 1
Query: 163 LTRQDKAIIVATKSXXXXXXXXXXXXXXXXXXXXEEEVKTVARVAXXXXXKAVAIVAAKEDAEKNAVGITVAAEAERTAAEDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXEADGQEAINAARNVLDDRIIALELKKALIEVMPEVMAASMKAVEKIKDIRVI 651
++ QDK I VA KSXXXXXXXXXXXXXX EE V T +VA K + ++ A+++AE++AVG+TV AEAE+ AAED++ A XXXXXXXXXXXXXXXXXXXEA G++A+ A NVL D IAL+ A + +PE++A ++K +E I+ I+++
Sbjct: 331 VSEQDKRIAVAAKSXXXXXXXXXXXXXXKTKVEKEEGVITTRQVAEANRRKEIEVIDARKEAERDAVGVTVHAEAEKRAAEDKSSAILIEAKXXXXXXXXXXXXXXXXXXXEAAGKQALYEAENVLRDEQIALQKSLATLTALPEIVAQTVKPLENIEGIKIL 493 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73395.18504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig73395.18504.1 >prot_Ecto-sp13_S_contig73395.18504.1 ID=prot_Ecto-sp13_S_contig73395.18504.1|Name=mRNA_Ecto-sp13_S_contig73395.18504.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp ARLDTERNVANYAAETRAQTAEKEAEAKRLEEQAAIQAKLAVERRQIESDback to top mRNA from alignment at Ecto-sp13_S_contig73395:10..669+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig73395.18504.1 ID=mRNA_Ecto-sp13_S_contig73395.18504.1|Name=mRNA_Ecto-sp13_S_contig73395.18504.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig73395:10..669+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig73395:10..669+ >mRNA_Ecto-sp13_S_contig73395.18504.1 ID=mRNA_Ecto-sp13_S_contig73395.18504.1|Name=mRNA_Ecto-sp13_S_contig73395.18504.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig73395:10..669+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |