prot_Ecto-sp13_S_contig7299.18459.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7299.18459.1
Unique Nameprot_Ecto-sp13_S_contig7299.18459.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length164
Homology
BLAST of mRNA_Ecto-sp13_S_contig7299.18459.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 1.540e-65
Identity = 118/134 (88.06%), Postives = 121/134 (90.30%), Query Frame = 0
Query:    1 RIDPLDEAYVLGLFERPDVTVVIKGLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIPIREEAWSSMRLRDFVRYLNKRADAKRARAIATAAAAPTVEAPSAAAA-PGQPNASVRGRNSGSV 133
            RIDPLDEAYVLGLFERPDVTVVI GLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIP+REEAWSSMRLRD+VRYLNK ADAKRARA       P  EAPSAAAA PGQP+ASV GRNSGSV
Sbjct:   42 RIDPLDEAYVLGLFERPDVTVVINGLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIPVREEAWSSMRLRDYVRYLNKLADAKRARATXXXXXXPADEAPSAAAAEPGQPDASVPGRNSGSV 175          
BLAST of mRNA_Ecto-sp13_S_contig7299.18459.1 vs. uniprot
Match: A0A7S2B8L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B8L6_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 7.750e-15
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 0
Query:    2 IDPLDEAYVLGLFERPDVTVVIKGLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIPIREEAWSSMRLRDFVRYLNKRADAKR 96
            +DP D+ Y+  L ++PDVT+++KGL +GL PHLW+  YL  RCG++M H  R F       R       +  E W SMRL D++ YL  R  A R
Sbjct:   19 LDPDDDDYLHRLLDQPDVTLIVKGLGDGLTPHLWSEPYLKSRCGDLMLHKLRCFR----GSRNKCAQDSVETE-WKSMRLNDYMGYLEARQKAHR 108          
BLAST of mRNA_Ecto-sp13_S_contig7299.18459.1 vs. uniprot
Match: A0A7S2SQY1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY1_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.140e-13
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    2 IDPLDEAYVLGLFERPDVTVVIKGLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIPIREEAWSSMRLRDFVRYLNKRADA 94
            + P DEAY+  L +RPD+TV+I+GL++GL PHLW+  YL  RC ++M H  R F R     R P     +  E W SM +  +  YL  RA A
Sbjct:  476 VHPDDEAYICQLLDRPDLTVIIRGLSDGLSPHLWSIPYLRSRCRDLMVHKLRCFRR-----RSPSSTESLETE-WRSMPVHSYCNYLEARAAA 562          
BLAST of mRNA_Ecto-sp13_S_contig7299.18459.1 vs. uniprot
Match: B8CCF4_THAPS (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCF4_THAPS)

HSP 1 Score: 57.4 bits (137), Expect = 1.490e-6
Identity = 31/96 (32.29%), Postives = 48/96 (50.00%), Query Frame = 0
Query:    6 DEAYVLGLFERPDVTVVIKGLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIPIREEA----------WSSMRLRDFVRYLNKR 91
            DE ++  + ER D+TV+ +GLA+G++P LWN  Y+    G   +H FR F +      G  V     +E           W SM + D+  YL++R
Sbjct:  461 DEVFLFKMMERDDITVISEGLADGINPSLWNKEYIRNCIGSEFHHKFRGFEKSSHKSFGGDVADDEDKEETVVQYEEMKNWYSMTVSDYYGYLDRR 556          
BLAST of mRNA_Ecto-sp13_S_contig7299.18459.1 vs. uniprot
Match: A0A7S3ZG35_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZG35_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 7.790e-6
Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 0
Query:   21 VVIKGLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIPIREEAWSSMRLRDFVRYLNKR 91
            V+IKGL   L   LWNT YL ++ G MMYH FRR+     +           E+ W SM + D+ RYL+ R
Sbjct:   18 VIIKGLGRRLSHELWNTPYLFQKLGPMMYHRFRRYCLVDSSHTQGGFEKRYEEKDWLSMTIGDYQRYLDAR 88          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7299.18459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCL4_ECTSI1.540e-6588.06ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S2B8L6_9STRA7.750e-1542.11Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2SQY1_9STRA3.140e-1343.01Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8CCF4_THAPS1.490e-632.29RanBP2-type domain-containing protein (Fragment) n... [more]
A0A7S3ZG35_9EUKA7.790e-640.85Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7299contigEcto-sp13_S_contig7299:4542..6301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7299.18459.1mRNA_Ecto-sp13_S_contig7299.18459.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7299 4540..6301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7299.18459.1 ID=prot_Ecto-sp13_S_contig7299.18459.1|Name=mRNA_Ecto-sp13_S_contig7299.18459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=164bp
RIDPLDEAYVLGLFERPDVTVVIKGLANGLDPHLWNTRYLNERCGEMMYH
SFRRFTRPGGARRGPFVPIPIREEAWSSMRLRDFVRYLNKRADAKRARAI
ATAAAAPTVEAPSAAAAPGQPNASVRGRNSGSVAGGVENGGSNGGRSGGR
GRAGGKAGSPEEGQ
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