prot_Ecto-sp13_S_contig7299.18458.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7299.18458.1
Unique Nameprot_Ecto-sp13_S_contig7299.18458.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.300e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query:    1 MPHCDGATPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            MPHCDGATPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK
Sbjct:  430 MPHCDGATPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 479          
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: A0A7S2DKI0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKI0_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 4.680e-21
Identity = 39/50 (78.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    1 MPHCDGATPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            MPH DG  P WPT   +E LR+LN+CPSVFTLEPGEFVHINKGRLHAFRK
Sbjct:  159 MPHNDGQKPSWPTPSQIESLRDLNYCPSVFTLEPGEFVHINKGRLHAFRK 208          
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: A0A7S2SQY1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.600e-17
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    2 PHCDGATPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            PH  G  PPWPT+  ++ LR   +CPSVFTLEPG++VHINKGRLHAFRK
Sbjct:  749 PHDAGEKPPWPTETQIDELRRRGYCPSVFTLEPGDYVHINKGRLHAFRK 797          
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: A0A448ZRZ6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRZ6_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.180e-15
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MPHCDGA--TPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            MPH DG    PPWPT + +E  R++ +CPSV  LEPG+ VHINKGRLHAFRK
Sbjct:  744 MPHGDGLGKKPPWPTKDMLEDCRKMGYCPSVLILEPGDLVHINKGRLHAFRK 795          
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: A0A7S2NZI7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZI7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.120e-14
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MPHCDGAT--PPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            +PH DG    P WPT + V R RE+N+CPSVF L+P + VHINKGRLHAFRK
Sbjct:   22 LPHGDGYVDKPEWPTHDVVSRWREMNYCPSVFILKPNQHVHINKGRLHAFRK 73          
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: A0A7S4EEL1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEL1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.120e-14
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MPHCDGA--TPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            +PH DG    PPWP+++ VE  + + +CPS+F LEPG+ VHINKGRLHAFRK
Sbjct:  729 VPHGDGLGKKPPWPSNDMVEECKTMGYCPSIFILEPGDLVHINKGRLHAFRK 780          
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: A0A7S3Q867_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q867_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.850e-14
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    1 MPHCDGATPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            +PH DG  P WP  EA++   ELN+ P VF L+PG+F+HINKGRLHAFRK
Sbjct:  618 LPHHDGKKPLWPDHEAIKNCDELNYYPCVFILKPGQFLHINKGRLHAFRK 667          
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: A0A7S1ZIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIK7_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.850e-13
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MPHCDGA--TPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            +PH DG    P WP  E++ER R++N+ PSVF L+PG+ VHINKGRLHAFRK
Sbjct:  810 LPHEDGCGERPMWPDCESIERCRKMNYYPSVFILKPGQHVHINKGRLHAFRK 861          
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: A0A1E7FK00_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK00_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.730e-13
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MPHCDG--ATPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            +PH DG  + P WPT + VE  + + +CPS+ TL PGE +HINKGRLHAFRK
Sbjct:  721 VPHGDGLGSKPKWPTMDMVEECKRMGYCPSLLTLGPGELIHINKGRLHAFRK 772          
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Match: A0A7S2VFF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VFF2_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.760e-13
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MPHCDGATPP--WPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 50
            +PH D   P   WPT  A+   +E+ +CPSVF L+PG+ VHINKGRLHAFRK
Sbjct:  105 LPHRDDLDPSLGWPTKGAIRFCKEMGYCPSVFILKPGQMVHINKGRLHAFRK 156          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7299.18458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LCL4_ECTSI1.300e-28100.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S2DKI0_9STRA4.680e-2178.00Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A7S2SQY1_9STRA7.600e-1767.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A448ZRZ6_9STRA8.180e-1563.46Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2NZI7_9STRA1.120e-1463.46Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4EEL1_9STRA1.120e-1459.62Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3Q867_9STRA2.850e-1462.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1ZIK7_9STRA1.850e-1361.54Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7FK00_9STRA4.730e-1357.69Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2VFF2_9STRA5.760e-1357.69Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7299contigEcto-sp13_S_contig7299:448..1504 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7299.18458.1mRNA_Ecto-sp13_S_contig7299.18458.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7299 448..1519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7299.18458.1 ID=prot_Ecto-sp13_S_contig7299.18458.1|Name=mRNA_Ecto-sp13_S_contig7299.18458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
MPHCDGATPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK
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