mRNA_Ecto-sp13_S_contig7294.18448.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: A0A6H5J685_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J685_9PHAE) HSP 1 Score: 363 bits (931), Expect = 3.010e-117 Identity = 179/186 (96.24%), Postives = 182/186 (97.85%), Query Frame = 3
Query: 3 EVVLSVDTPSSPDSCITVDLARNLTRAELERFGADRTGIPDYAMGPAGAHVISRMTSETYEPPMGLLEWFISKRRGVSLQAVSPPPVAINPESRLGRCWPMKGSDGRLTVKLSRTIKVESISLEHAPREVLLNKGVSAPKDFTVVGFPKGRAVRDDDPGDVLVSGGEYRLEGDVIQFFQVAEEYRQ 560
EVVLSVDTPSSPDSCITVDLARNLTRAELERFGADRTGIPDYAM PAGAHVISRMTSETYEPPMGLLEWF SKRRG SLQAVSPPPVAINPESRLGRCWPMKGSDGRLTVKL+RTIKVESISLEHAPREVLLN+GVSAPKDFTVVG+PKGR VRDDDPGDVLVSGGEYRLEGDVIQFFQVAEEYRQ
Sbjct: 283 EVVLSVDTPSSPDSCITVDLARNLTRAELERFGADRTGIPDYAMEPAGAHVISRMTSETYEPPMGLLEWFRSKRRGASLQAVSPPPVAINPESRLGRCWPMKGSDGRLTVKLARTIKVESISLEHAPREVLLNRGVSAPKDFTVVGYPKGRVVRDDDPGDVLVSGGEYRLEGDVIQFFQVAEEYRQ 468
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: D8LC58_ECTSI (Sad1/Unc-84 domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC58_ECTSI) HSP 1 Score: 163 bits (413), Expect = 3.930e-45 Identity = 80/84 (95.24%), Postives = 83/84 (98.81%), Query Frame = 3
Query: 309 GSDGRLTVKLSRTIKVESISLEHAPREVLLNKGVSAPKDFTVVGFPKGRAVRDDDPGDVLVSGGEYRLEGDVIQFFQVAEEYRQ 560
GSDGRLTVKL+RTIKVESISLEHAPREVLLNKGVSAPKDFTVVG+PKGR VRDDDPGDVLVSGGEYRLEGDVIQFF+VAEEYRQ
Sbjct: 10 GSDGRLTVKLARTIKVESISLEHAPREVLLNKGVSAPKDFTVVGYPKGRVVRDDDPGDVLVSGGEYRLEGDVIQFFEVAEEYRQ 93
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: D8LC59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC59_ECTSI) HSP 1 Score: 127 bits (319), Expect = 4.880e-29 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 3
Query: 3 EVVLSVDTPSSPDSCITVDLARNLTRAELERFGADRTGIPDYAMGPAGAHVISRMTSETYEP 188
EVVLSVDTPSSPDSC+TVDLARNLTRAELERFGADRTGIPDYAMGPAGAHVISRMTSETYEP
Sbjct: 289 EVVLSVDTPSSPDSCVTVDLARNLTRAELERFGADRTGIPDYAMGPAGAHVISRMTSETYEP 350
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: A0A8J4WPX6_9TREM (SUN domain-containing protein 2 n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4WPX6_9TREM) HSP 1 Score: 99.4 bits (246), Expect = 2.690e-18 Identity = 63/161 (39.13%), Postives = 87/161 (54.04%), Query Frame = 3
Query: 81 AELERFGADRTGIPDYAMGPAGAHVISRMTSETYEPPMGLLEWFISKRRGVSLQAVSPPPVAI-NPESRLGRCWPMKGSDGRLTVKLSRTIKVESISLEHAPREVLLNKGVS--APKDFTVVGFPKGRAVRDDDPGDVLVSGGEYRLEGDVIQFFQVAEEY 554
A LERF ADRTG+PD+A+ AG VI+ + TY L F G+ L +S P I +P + G CWP GS G++ ++LS I + ++SLEH PR VL G S APKDF + KG A D+ G V++ Y ++G IQ + + Y
Sbjct: 720 ASLERFAADRTGLPDFALESAGGTVIATRCTRTYTGGAALFSLF-----GIPLVRLSNSPRTILHPSNNAGDCWPFHGSSGQVVIRLSDPIVINAVSLEHLPR-VLARTGRSDSAPKDFLI----KGLASEVDEEG-VVLGNFTYNIDGPSIQTYPIKASY 869
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: A0A1Y1YAC7_9FUNG (SUN domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YAC7_9FUNG) HSP 1 Score: 93.6 bits (231), Expect = 4.020e-18 Identity = 50/131 (38.17%), Postives = 80/131 (61.07%), Query Frame = 3
Query: 54 VDLARNLTRAELERFGADRTGIPDYAMGPAGAHVISRMTSETYEPPMGLLEWFISKRRGVSLQAV-SPPPVAINPESRLGRCWPMKGSDGRLTVKLSRTIKVESISLEHAPREVLLNKGVSAPKDFTVVGF 443
V L +L + L + AD PD+AM AGA VI+++TS +Y P G +++ G++ + +PP +A++P++ LGRCW GS G+LT++LSRTI ++EH ++V ++ SAPK+ V GF
Sbjct: 23 VGLIEDLIQGTLFKHTADTIAKPDFAMYSAGARVITKLTSPSYLPQTGSFLGKLAQVFGINTRKNGNPPAIAMDPDTHLGRCWAFPGSQGQLTIQLSRTINATDFTIEHVDQQVAIDLR-SAPKNIEVYGF 152
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: A0A5J4NTC8_9TREM (SUN domain-containing protein 1/2 n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NTC8_9TREM) HSP 1 Score: 98.2 bits (243), Expect = 7.340e-18 Identity = 62/161 (38.51%), Postives = 86/161 (53.42%), Query Frame = 3
Query: 81 AELERFGADRTGIPDYAMGPAGAHVISRMTSETYEPPMGLLEWFISKRRGVSLQAVSPPPVAI-NPESRLGRCWPMKGSDGRLTVKLSRTIKVESISLEHAPREVLLNKGVS--APKDFTVVGFPKGRAVRDDDPGDVLVSGGEYRLEGDVIQFFQVAEEY 554
A LERF ADRTG+PD+A+ AG VI+ + TY L F G+ L +S P I +P + G CWP GS G++ ++LS I + ++SLEH PR VL G S APKDF + KG D+ G V++ Y ++G IQ + + Y
Sbjct: 970 ASLERFAADRTGLPDFALESAGGTVIATRCTRTYTGGAALFSLF-----GIPLVRLSNSPRTILHPSNNAGDCWPFHGSSGQVVIRLSDPILINAVSLEHLPR-VLARTGRSDSAPKDFLI----KGLTSEVDEEG-VILGNFTYNIDGPSIQTYPIKASY 1119
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: A0A8H7Q9P9_9FUNG (SUN domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q9P9_9FUNG) HSP 1 Score: 97.8 bits (242), Expect = 7.890e-18 Identity = 56/175 (32.00%), Postives = 99/175 (56.57%), Query Frame = 3
Query: 54 VDLARNLTRAELERFGADRTGIPDYAMGPAGAHVISRMTSETYE-PPMGLLEWFISKRRGVSLQAVSPPPVAINPESRLGRCWPMKGSDGRLTVKLSRTIKVESISLEHAPREVLLNKGVSAPKDFTV-------VGFPKGRAVRDDDPGDVLVSGGEYRLEG-DVIQFFQVAEE 551
+D+ + + ++ D +PDYA+ +GA +I R+TS TYE P L+W I K + + SP A+ P++ +G+CWPM G++G + + LS+ IKV +++EHA ++VLL++ SAPK+F + +G A+ D + ++ G+Y E + +Q F V+ +
Sbjct: 589 MDIVNRMIDEAILKYHQDYLALPDYALASSGARIIPRLTSPTYELEPTDNLKWLIHKV--IPFRDTSPAITALYPDTNVGQCWPMVGNNGSIGILLSQPIKVTGVTIEHAGKQVLLDRR-SAPKNFALWGVYGEHLGQTADGALGDQSQHVIELTSGQYDAEDPNAVQSFPVSPQ 760
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: A0A316YM44_9BASI (SUN domain-containing protein n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YM44_9BASI) HSP 1 Score: 89.7 bits (221), Expect = 3.750e-15 Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 3
Query: 39 DSCITVDLARNLTRAELERFGADRTGIPDYAMGPAGAHVISRMTSETY-----EPPMGLLEWFISKRRGVSLQAVSPPPVAINPESRLGRCWPMKGSDGRLTVKLSRTIKVESISLEHAPREVLLNKGVSAPKDFTVVGF 443
D D L +A L+++ ADRTG PD+A+ AG +I +TS T+ P + WF ++ S P +AI+ ++ G CWP G +G+L + LSR I V ++L+H P E + SAP+D TV G
Sbjct: 862 DDITAADAVIALIQAALDKYSADRTGKPDFALATAGGRIIPSLTSPTFADVRARAPSYISTWFGARGNSPSPIVHRVPHLAIHHDTSQGMCWPFAGEEGQLGIGLSRKIIVTDVTLDHLPLENAYGEDRSAPRDVTVWGL 1001
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: A0A2T9Y0H4_9FUNG (SUN domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9Y0H4_9FUNG) HSP 1 Score: 88.2 bits (217), Expect = 1.080e-14 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 3
Query: 87 LERFGADRTGIPDYAMGPAGAHVISRMTSETYEPPMGLLEWFISKRRGVSLQAVSPPPVAINPESRLGRCWPMKGSDGRLTVKLSRTIKVESISLEHAPREVLLNKGVSAPKDFTVVGF 443
L +F +D PD+A+ AGA VI + T+E++ P + I K+ G+ + P VA++P LG CWPMKGS+G L +KL+R IK ++EH + + ++ S+PK+ V G+
Sbjct: 676 LPKFSSDYRNQPDFALYSAGARVIRKETTESWSPKLKTFSGRILKKLGILQYPTNSPAVALDPYVNLGECWPMKGSNGVLAIKLARRIKPTGFAIEHVIKSLAIDLS-SSPKELEVWGY 793
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Match: UPI00083C77AE (SUN domain-containing protein 2-like n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C77AE) HSP 1 Score: 85.9 bits (211), Expect = 1.630e-14 Identity = 54/164 (32.93%), Postives = 82/164 (50.00%), Query Frame = 3
Query: 57 DLARNLTRAELERFGADRTGIPDYAMGPAGAHVISRMTSETYEPPMGLLEWFISKRRGVSLQAVSP-PPVAINPESRLGRCWPMKGSDGRLTVKLSRTIKVESISLEHAPREVLLNKGVS-APKDFTVVGFPKGRAVRDDDPGDVLVSGGEYRLEGDVIQFFQV 542
D + + +E +GAD+ G PDYA+G AGA ++S T T E G + F G +L A + P + +NP G CW KGS G + +KL I + ISLEH P+ V + VS AP +F+ G + +D V + Y+ + +Q+F +
Sbjct: 183 DDVKKAVKTAMEVYGADKIGKPDYALGTAGASIVS--TRNTIEYTAGNIISFF----GYTLCASNKGPQIILNPSVSPGECWAFKGSSGAVAIKLLTPIHINGISLEHIPKSVAPSHDVSSAPNEFSAWGL-----LYPEDHAGVFLGRFNYKTDSSPLQYFPI 335 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7294.18448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7294.18448.1 >prot_Ecto-sp13_S_contig7294.18448.1 ID=prot_Ecto-sp13_S_contig7294.18448.1|Name=mRNA_Ecto-sp13_S_contig7294.18448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp MMTPGTFLSAEGSIAWRGTSSSSSKSPRSIDSESVRVFQTSWHIVKVGTSback to top mRNA from alignment at Ecto-sp13_S_contig7294:2960..7081- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7294.18448.1 ID=mRNA_Ecto-sp13_S_contig7294.18448.1|Name=mRNA_Ecto-sp13_S_contig7294.18448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7294:2960..7081- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7294:2960..7081- >mRNA_Ecto-sp13_S_contig7294.18448.1 ID=mRNA_Ecto-sp13_S_contig7294.18448.1|Name=mRNA_Ecto-sp13_S_contig7294.18448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7294:2960..7081- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |