mRNA_Ecto-sp13_S_contig7293.18447.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: D8LBW2_ECTSI (Signal peptide peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW2_ECTSI) HSP 1 Score: 227 bits (578), Expect = 3.230e-67 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
Query: 10 IDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSARSFTAEEDAYFGRGAMA 366
IDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSARSFTAEEDAYFGRGAMA
Sbjct: 506 IDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSARSFTAEEDAYFGRGAMA 624
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: A0A5J4Z7N2_PORPP (Serine protease SPPA, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7N2_PORPP) HSP 1 Score: 134 bits (338), Expect = 2.750e-34 Identity = 70/119 (58.82%), Postives = 90/119 (75.63%), Query Frame = 1
Query: 7 QIDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELF-SARSFTAEEDAYFGRGA 360
++ V++RV SPGG A ASD+MWRE+R+LRE K V+AS+ DVAASGGYY++M C+ IV +E ++TGSIGVV+A L + EL +KIG E +S+GKYAELF RSFT EE YF GA
Sbjct: 424 RVKAVILRVDSPGGSALASDVMWRELRKLREK-KPVIASMGDVAASGGYYLSMACDEIVAEERTLTGSIGVVTAKLSLEELFKKIGFVRENLSRGKYAELFVDNRSFTREEAEYFRAGA 541
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: UPI00098DE2EA (serine protease SPPA, chloroplastic n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098DE2EA) HSP 1 Score: 131 bits (330), Expect = 3.470e-33 Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 1 YPQIDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSA--RSFTAEEDAYFGRGA 360
Y + VV+R+ SPGGDA ASDLMWRE+R L S K V+AS++DVAASGGYY+AM + IV ++L++TGSIGVV+ +G+L E+IG E+IS+GKYAELFSA RSF +E F + A
Sbjct: 433 YKAVKAVVLRIDSPGGDALASDLMWREIRLLAAS-KPVIASMSDVAASGGYYMAMAAQTIVAEKLTLTGSIGVVTGKFSLGKLYERIGFNKEIISRGKYAELFSADQRSFRPDEAELFEKSA 553
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: A0A371ERT0_MUCPR (Serine protease SPPA, chloroplastic (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371ERT0_MUCPR) HSP 1 Score: 124 bits (311), Expect = 5.110e-33 Identity = 64/115 (55.65%), Postives = 85/115 (73.91%), Query Frame = 1
Query: 22 VVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSA--RSFTAEEDAYFGRGA 360
++R+ SPGGDA ASDLMWRE++ L S K V+AS+ADVAASGGYY+AMG + IV + L++TGSIGVV+ +G+L EKIG E+IS+G+YAEL +A R F +E F + A
Sbjct: 100 IIRIDSPGGDALASDLMWREIQLLAAS-KPVIASMADVAASGGYYMAMGADAIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYAELLAAEQRPFRPDEAELFAKSA 213
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: A0A7S0X169_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0X169_9CHLO) HSP 1 Score: 131 bits (329), Expect = 5.140e-33 Identity = 69/118 (58.47%), Postives = 88/118 (74.58%), Query Frame = 1
Query: 10 IDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSA-RSFTAEEDAYFGRGA 360
+ VV+RV SPGGDA ASDLMWREV++L E K V+AS+ADVAASGGYYIAM C +IV + L++TGSIGVV+ +GEL K+G T ELIS+G++AEL + R+F +EE F A
Sbjct: 409 VAAVVLRVDSPGGDALASDLMWREVKKLAEK-KPVIASMADVAASGGYYIAMACSKIVAEPLTVTGSIGVVTGKFNLGELYAKVGYTKELISRGRFAELLADNRAFNSEEARLFEEAA 525
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: A0A7C9AD89_OPUST (Peptidase_S49 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AD89_OPUST) HSP 1 Score: 124 bits (311), Expect = 7.610e-33 Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 19 VVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSA--RSFTAEEDAYFGRGA 360
VV+R+ SPGGDA ASDL+WRE+R L K V+AS+ADVAASGGYYIAM IV + L++TGSIGVV +G+L EKIG +ISKGKYAEL +A RSF EE F + A
Sbjct: 87 VVIRIDSPGGDALASDLLWREIRLLAAE-KPVIASLADVAASGGYYIAMAAGTIVAENLTLTGSIGVVKGKFSLGKLYEKIGFNKAIISKGKYAELTAAEQRSFRPEEAELFAKSA 201
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: A0A7S1TAP7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAP7_9RHOD) HSP 1 Score: 129 bits (325), Expect = 1.670e-32 Identity = 65/119 (54.62%), Postives = 88/119 (73.95%), Query Frame = 1
Query: 10 IDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSA-RSFTAEEDAYFGRGAM 363
+ +++R+ SPGG A ASDLMW E+R +RE K ++AS+ DVAASGGYYIAM C RIVC+ +ITGS+GVV+A L +GEL +++G+ E ISKG YAEL + R+ +E YF RGA+
Sbjct: 423 VKAIILRIDSPGGSALASDLMWGELRAVREK-KPIIASMVDVAASGGYYIAMACNRIVCERSTITGSVGVVTAKLSLGELYQRVGLQREDISKGAYAELDTEYRALNEDEGRYFERGAL 540
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: A0A0R0JK38_SOYBN (Peptidase_S49 domain-containing protein (Fragment) n=1 Tax=Glycine max TaxID=3847 RepID=A0A0R0JK38_SOYBN) HSP 1 Score: 124 bits (312), Expect = 2.690e-32 Identity = 64/120 (53.33%), Postives = 86/120 (71.67%), Query Frame = 1
Query: 7 QIDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSA--RSFTAEEDAYFGRGA 360
+ ++R+ SPGGDA ASDLMWRE+R L S K V+AS++DVAASGGYY+AMG + IV + L++TGSIGVV+ +G+L EKIG E++S+GKYAEL +A R F +E F + A
Sbjct: 59 EFKAAIIRIDSPGGDALASDLMWREIRLLAAS-KPVIASMSDVAASGGYYMAMGADVIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEILSRGKYAELLAAEQRPFRPDEAELFAKSA 177
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: A0A5N6N5I8_9ASTR (Uncharacterized protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6N5I8_9ASTR) HSP 1 Score: 128 bits (321), Expect = 6.430e-32 Identity = 66/118 (55.93%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 19 VVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSA-RSFTAEEDAYFGRGAMAV 369
V++R+ SPGGD ASDLMWRE++ L ES K VVAS+ DVAASGGYY+AM IV + L++TGSIGV++A +G+L EKIG E+ISKG+YAEL++A RSF +E+ F A +
Sbjct: 353 VIIRIDSPGGDVLASDLMWREIKLLAES-KPVVASMVDVAASGGYYMAMAAHTIVSENLTLTGSIGVITAKFNLGKLYEKIGFNKEIISKGQYAELYAADRSFRPDEEKLFAERAQNI 469
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Match: A0A4P1RU08_LUPAN (Uncharacterized protein n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A4P1RU08_LUPAN) HSP 1 Score: 128 bits (321), Expect = 6.700e-32 Identity = 69/123 (56.10%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 7 QIDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSA--RSFTAEEDAYFGRGAMAV 369
+I ++R+ SPGGDA ASDLMWRE+R L S K VVAS++DVAASGGYY+AMG IV + L++TGSIGVV+ +G+L EKIG E+IS+GKYAEL +A RSF +E F + A V
Sbjct: 552 KIKAAIIRIDSPGGDALASDLMWREIRLLAAS-KPVVASMSDVAASGGYYMAMGTGTIVAESLTLTGSIGVVTGKFNLGKLYEKIGFKKEIISRGKYAELLAAEQRSFRPDEAELFAKSAQHV 673 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7293.18447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7293.18447.1 >prot_Ecto-sp13_S_contig7293.18447.1 ID=prot_Ecto-sp13_S_contig7293.18447.1|Name=mRNA_Ecto-sp13_S_contig7293.18447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp YPQIDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGback to top mRNA from alignment at Ecto-sp13_S_contig7293:5876..7056- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7293.18447.1 ID=mRNA_Ecto-sp13_S_contig7293.18447.1|Name=mRNA_Ecto-sp13_S_contig7293.18447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1181bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7293:5876..7056- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7293:5876..7056- >mRNA_Ecto-sp13_S_contig7293.18447.1 ID=mRNA_Ecto-sp13_S_contig7293.18447.1|Name=mRNA_Ecto-sp13_S_contig7293.18447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=369bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7293:5876..7056- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |