prot_Ecto-sp13_S_contig12195.1842.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12195.1842.1
Unique Nameprot_Ecto-sp13_S_contig12195.1842.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length38
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12195.1842.1 vs. uniprot
Match: A0A6H5KHF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF2_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 6.760e-17
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:    1 MLVTDELVDRTQNCCLTSVDFLEAMVRLADALPRQGDL 38
            MLVTDELVDRT+NCCLT VDFLEAMVRLADALPRQGDL
Sbjct:    1 MLVTDELVDRTKNCCLTPVDFLEAMVRLADALPRQGDL 38
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BLAST of mRNA_Ecto-sp13_S_contig12195.1842.1 vs. uniprot
Match: D8LET6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET6_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 2.530e-15
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:    1 MLVTDELVDRTQNCCLTSVDFLEAMVRLADALPRQGDL 38
            MLVTDELVDRT+NCCLT VDFLEAMVRLADALPRQGDL
Sbjct: 2410 MLVTDELVDRTKNCCLTPVDFLEAMVRLADALPRQGDL 2447
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12195.1842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHF2_9PHAE6.760e-1794.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LET6_ECTSI2.530e-1594.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12195contigEcto-sp13_S_contig12195:3065..3178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12195.1842.1mRNA_Ecto-sp13_S_contig12195.1842.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12195 3059..3178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12195.1842.1 ID=prot_Ecto-sp13_S_contig12195.1842.1|Name=mRNA_Ecto-sp13_S_contig12195.1842.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=38bp
MLVTDELVDRTQNCCLTSVDFLEAMVRLADALPRQGDL
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